RNA–Protein interactions for RNA: ENST00000399120.5

HLCS-202, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,466 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-202ENST00000399120 TPRNQ4KMQ1 711 aa15.29■□□□□ 0.04
HLCS-202ENST00000399120 IRX6P78412 446 aaPredicted RBP15.28■□□□□ 0.04
HLCS-202ENST00000399120 C14orf37Q86TY3 774 aa15.27■□□□□ 0.04
HLCS-202ENST00000399120 PLEKHG5O94827 1062 aa15.26■□□□□ 0.03
HLCS-202ENST00000399120 KDM2AQ9Y2K7 1162 aa15.25■□□□□ 0.03
HLCS-202ENST00000399120 NAP1L5Q96NT1 182 aaPredicted RBP15.25■□□□□ 0.03
HLCS-202ENST00000399120 GOLGA6L6A8MZA4 724 aa15.24■□□□□ 0.03
HLCS-202ENST00000399120 ERICH6BQ5W0A0 696 aa15.24■□□□□ 0.03
HLCS-202ENST00000399120 CSRNP3Q8WYN3 585 aa15.22■□□□□ 0.03
HLCS-202ENST00000399120 PLCB2Q00722 1185 aa15.2■□□□□ 0.02
HLCS-202ENST00000399120 CHIC2Q9UKJ5 165 aa15.19■□□□□ 0.02
HLCS-202ENST00000399120 NRDCO43847 1150 aa15.17■□□□□ 0.02
HLCS-202ENST00000399120 HAP1P54257 671 aaPredicted RBP15.17■□□□□ 0.02
HLCS-202ENST00000399120 TAOK2Q9UL54 1235 aa15.16■□□□□ 0.02
HLCS-202ENST00000399120 PPM1GO15355 546 aaPredicted RBP15.16■□□□□ 0.02
HLCS-202ENST00000399120 TSPY4P0CV99 314 aa15.14■□□□□ 0.01
HLCS-202ENST00000399120 TSPY10P0CW01 314 aa15.14■□□□□ 0.01
HLCS-202ENST00000399120 NCBP3Q53F19 620 aaKnown RBP15.14■□□□□ 0.01
HLCS-202ENST00000399120 FTSJ3Q8IY81 847 aaKnown RBP15.14■□□□□ 0.01
HLCS-202ENST00000399120 PPP1R15AO75807 674 aaPredicted RBP15.13■□□□□ 0.01
HLCS-202ENST00000399120 CFAP53Q96M91 514 aa15.13■□□□□ 0.01
HLCS-202ENST00000399120 FGD1P98174 961 aa15.11■□□□□ 0.01
HLCS-202ENST00000399120 NPHP1O15259 732 aa15.1■□□□□ 0.01
HLCS-202ENST00000399120 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
HLCS-202ENST00000399120 CHAF1AQ13111 956 aaPredicted RBP15.09■□□□□ 0.01
HLCS-202ENST00000399120 CLSTN1O94985 981 aa15.08■□□□□ 0
HLCS-202ENST00000399120 HSP90AB1P08238 724 aaKnown RBP15.08■□□□□ 0
HLCS-202ENST00000399120 EIF4G2P78344 907 aaKnown RBP eCLIP15.08■□□□□ 0
HLCS-202ENST00000399120 NAP1L2Q9ULW6 460 aaPredicted RBP15.07■□□□□ 0
HLCS-202ENST00000399120 RTN4Q9NQC3 1192 aaKnown RBP15.07■□□□□ 0
HLCS-202ENST00000399120 L1TD1Q5T7N2 865 aaKnown RBP15.05■□□□□ 0
HLCS-202ENST00000399120 LAS1LQ9Y4W2 734 aaKnown RBP15.05■□□□□ -0
HLCS-202ENST00000399120 KCNJ4P48050 445 aa15.04■□□□□ -0
HLCS-202ENST00000399120 OS9Q13438 667 aaPredicted RBP15.04■□□□□ -0
HLCS-202ENST00000399120 GOLGA6L4A6NEF3 574 aa15.04■□□□□ -0
HLCS-202ENST00000399120 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
HLCS-202ENST00000399120 ABCC9O60706 1549 aa15.04■□□□□ -0
HLCS-202ENST00000399120 HIRIP3Q9BW71 556 aaPredicted RBP15.03■□□□□ -0
HLCS-202ENST00000399120 GOLGA2Q08379 1002 aa15.02■□□□□ -0
HLCS-202ENST00000399120 MAPK8IP3Q9UPT6 1336 aa15.01□□□□□ -0.01
HLCS-202ENST00000399120 MIER1Q8N108 512 aa15□□□□□ -0.01
HLCS-202ENST00000399120 CHMP4BQ9H444 224 aaKnown RBP15□□□□□ -0.01
HLCS-202ENST00000399120 MSNP26038 577 aaKnown RBP14.99□□□□□ -0.01
HLCS-202ENST00000399120 KNSTRNQ9Y448 316 aa14.99□□□□□ -0.01
HLCS-202ENST00000399120 CDCA8Q53HL2 280 aa14.99□□□□□ -0.01
HLCS-202ENST00000399120 DRC7Q8IY82 874 aa14.99□□□□□ -0.01
HLCS-202ENST00000399120 PNNQ9H307 717 aaKnown RBP14.98□□□□□ -0.01
HLCS-202ENST00000399120 RGS3P49796 1198 aa14.98□□□□□ -0.01
HLCS-202ENST00000399120 NEUROD2Q15784 382 aa14.96□□□□□ -0.01
HLCS-202ENST00000399120 MTUS2Q5JR59 1369 aa14.96□□□□□ -0.01
HLCS-202ENST00000399120 NUDCQ9Y266 331 aa14.96□□□□□ -0.02
HLCS-202ENST00000399120 KIAA2012Q0VF49 1180 aa14.95□□□□□ -0.02
HLCS-202ENST00000399120 NOP58Q9Y2X3 529 aaKnown RBP14.95□□□□□ -0.02
HLCS-202ENST00000399120 SENP3-EIF4A1A0A087X0R7 540 aa14.94□□□□□ -0.02
HLCS-202ENST00000399120 HSCBQ8IWL3 235 aa14.94□□□□□ -0.02
HLCS-202ENST00000399120 FRAT1Q92837 279 aaPredicted RBP14.94□□□□□ -0.02
HLCS-202ENST00000399120 MS4A1P11836 297 aa14.93□□□□□ -0.02
HLCS-202ENST00000399120 SUPT16HQ9Y5B9 1047 aaKnown RBP14.93□□□□□ -0.02
HLCS-202ENST00000399120 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
HLCS-202ENST00000399120 NOC3LQ8WTT2 800 aaKnown RBP14.92□□□□□ -0.02
HLCS-202ENST00000399120 ISY1Q9ULR0 285 aaKnown RBP14.92□□□□□ -0.02
HLCS-202ENST00000399120 RGL3Q3MIN7 710 aa14.92□□□□□ -0.02
HLCS-202ENST00000399120 MCCP23508 829 aa14.91□□□□□ -0.02
HLCS-202ENST00000399120 RRP7BPQ9NSQ0 103 aa14.89□□□□□ -0.03
HLCS-202ENST00000399120 GNL2Q13823 731 aaKnown RBP14.89□□□□□ -0.03
HLCS-202ENST00000399120 PRM3Q9NNZ6 103 aa14.89□□□□□ -0.03
HLCS-202ENST00000399120 PPP4R2Q9NY27 417 aa14.88□□□□□ -0.03
HLCS-202ENST00000399120 ARID4BQ4LE39 1312 aaPredicted RBP14.88□□□□□ -0.03
HLCS-202ENST00000399120 TNNT3P45378 269 aaPredicted RBP14.84□□□□□ -0.03
HLCS-202ENST00000399120 POGKQ9P215 609 aa14.84□□□□□ -0.03
HLCS-202ENST00000399120 KCNH8Q96L42 1107 aa14.83□□□□□ -0.04
HLCS-202ENST00000399120 CFAP44Q96MT7 982 aa14.83□□□□□ -0.04
HLCS-202ENST00000399120 U2SURPO15042 1029 aaKnown RBP14.83□□□□□ -0.04
HLCS-202ENST00000399120 CARD11Q9BXL7 1154 aa14.83□□□□□ -0.04
HLCS-202ENST00000399120 CHMP7Q8WUX9 453 aaPredicted RBP14.82□□□□□ -0.04
HLCS-202ENST00000399120 SPRYD3Q8NCJ5 442 aa14.81□□□□□ -0.04
HLCS-202ENST00000399120 A0A0U1RQG5 324 aaPredicted RBP14.8□□□□□ -0.04
HLCS-202ENST00000399120 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
HLCS-202ENST00000399120 PTMSP20962 102 aa14.78□□□□□ -0.04
HLCS-202ENST00000399120 GOLGA6L1Q8N7Z2 621 aa14.78□□□□□ -0.04
HLCS-202ENST00000399120 KIAA1211Q6ZU35 1233 aa14.76□□□□□ -0.05
HLCS-202ENST00000399120 TPM4P67936 248 aa14.76□□□□□ -0.05
HLCS-202ENST00000399120 HTATSF1O43719 755 aaKnown RBP14.76□□□□□ -0.05
HLCS-202ENST00000399120 CC2D1BQ5T0F9 858 aaKnown RBP14.76□□□□□ -0.05
HLCS-202ENST00000399120 ARID3AQ99856 593 aa14.76□□□□□ -0.05
HLCS-202ENST00000399120 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
HLCS-202ENST00000399120 GBP4Q96PP9 640 aa14.74□□□□□ -0.05
HLCS-202ENST00000399120 DEKP35659 375 aaKnown RBP14.74□□□□□ -0.05
HLCS-202ENST00000399120 PDE4CQ08493 712 aa14.73□□□□□ -0.05
HLCS-202ENST00000399120 RSF1Q96T23 1441 aaPredicted RBP14.73□□□□□ -0.05
HLCS-202ENST00000399120 B4GALNT3Q6L9W6 998 aa14.73□□□□□ -0.05
HLCS-202ENST00000399120 SYAP1Q96A49 352 aaPredicted RBP14.71□□□□□ -0.05
HLCS-202ENST00000399120 USP35Q9P2H5 1018 aa14.71□□□□□ -0.06
HLCS-202ENST00000399120 CCDC34Q96HJ3 373 aa14.7□□□□□ -0.06
HLCS-202ENST00000399120 RTF1Q92541 710 aaKnown RBP14.69□□□□□ -0.06
HLCS-202ENST00000399120 CEP89Q96ST8 783 aa14.68□□□□□ -0.06
HLCS-202ENST00000399120 APBB1O00213 710 aa14.67□□□□□ -0.06
HLCS-202ENST00000399120 SOX12O15370 315 aa14.67□□□□□ -0.06
HLCS-202ENST00000399120 HSP90B1P14625 803 aaKnown RBP14.67□□□□□ -0.06
HLCS-202ENST00000399120 GZF1Q9H116 711 aaPredicted RBP14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms