RNA–Protein interactions for RNA: ENST00000398005.3

HMGN2P39-201, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 39, humanhuman

BASIC

Gene HMGN2P39, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN2P39-201ENST00000398005 TULP1O00294 542 aaPredicted RBP4.07□□□□□ -1.76
HMGN2P39-201ENST00000398005 ZRANB1Q9UGI0 708 aa4.07□□□□□ -1.76
HMGN2P39-201ENST00000398005 GALR2O43603 387 aaPredicted RBP4.06□□□□□ -1.76
HMGN2P39-201ENST00000398005 DCBLD2Q96PD2 775 aa4.06□□□□□ -1.76
HMGN2P39-201ENST00000398005 ARXQ96QS3 562 aa4.06□□□□□ -1.76
HMGN2P39-201ENST00000398005 KDM2AQ9Y2K7 1162 aa4.06□□□□□ -1.76
HMGN2P39-201ENST00000398005 VASPP50552 380 aaPredicted RBP4.05□□□□□ -1.76
HMGN2P39-201ENST00000398005 PAXIP1Q6ZW49 1069 aaPredicted RBP4.05□□□□□ -1.76
HMGN2P39-201ENST00000398005 CFAP44Q96MT7 982 aa4.05□□□□□ -1.76
HMGN2P39-201ENST00000398005 SPDYE4A6NLX3 237 aa4.04□□□□□ -1.76
HMGN2P39-201ENST00000398005 POTEB2H3BUK9 544 aa4.04□□□□□ -1.76
HMGN2P39-201ENST00000398005 STAG3Q9UJ98 1225 aa4.04□□□□□ -1.76
HMGN2P39-201ENST00000398005 MNX1P50219 401 aaPredicted RBP4.03□□□□□ -1.76
HMGN2P39-201ENST00000398005 BBXQ8WY36 941 aaPredicted RBP4.03□□□□□ -1.76
HMGN2P39-201ENST00000398005 GTF3C3Q9Y5Q9 886 aa4.03□□□□□ -1.76
HMGN2P39-201ENST00000398005 PKD2Q13563 968 aa4.02□□□□□ -1.77
HMGN2P39-201ENST00000398005 IFNLR1Q8IU57 520 aaPredicted RBP4.02□□□□□ -1.77
HMGN2P39-201ENST00000398005 OTUD5Q96G74 571 aa4.02□□□□□ -1.77
HMGN2P39-201ENST00000398005 PHF12Q96QT6 1004 aa4.02□□□□□ -1.77
HMGN2P39-201ENST00000398005 ERICH6Q7L0X2 663 aa4.01□□□□□ -1.77
HMGN2P39-201ENST00000398005 PELP1Q8IZL8 1130 aaKnown RBP4.01□□□□□ -1.77
HMGN2P39-201ENST00000398005 NBR1Q14596 966 aa4□□□□□ -1.77
HMGN2P39-201ENST00000398005 HOMEZQ8IX15 550 aa3.99□□□□□ -1.77
HMGN2P39-201ENST00000398005 PAK3O75914 559 aaPredicted RBP3.98□□□□□ -1.77
HMGN2P39-201ENST00000398005 SPRYD3Q8NCJ5 442 aa3.98□□□□□ -1.77
HMGN2P39-201ENST00000398005 ECM2O94769 699 aaPredicted RBP3.97□□□□□ -1.77
HMGN2P39-201ENST00000398005 NPM1P06748 294 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGN2P39-201ENST00000398005 MS4A3Q96HJ5 214 aa3.97□□□□□ -1.77
HMGN2P39-201ENST00000398005 TSHZ2Q9NRE2 1034 aa3.97□□□□□ -1.77
HMGN2P39-201ENST00000398005 POTEJP0CG39 1038 aa3.96□□□□□ -1.78
HMGN2P39-201ENST00000398005 ASTLQ6HA08 431 aaPredicted RBP3.96□□□□□ -1.78
HMGN2P39-201ENST00000398005 PROM2Q8N271 834 aa3.96□□□□□ -1.78
HMGN2P39-201ENST00000398005 ATMINO43313 823 aaPredicted RBP3.95□□□□□ -1.78
HMGN2P39-201ENST00000398005 KLHL34Q8N239 644 aa3.95□□□□□ -1.78
HMGN2P39-201ENST00000398005 TMEM132AQ24JP5 1023 aa3.94□□□□□ -1.78
HMGN2P39-201ENST00000398005 C14orf37Q86TY3 774 aa3.94□□□□□ -1.78
HMGN2P39-201ENST00000398005 METRNQ9UJH8 293 aa3.94□□□□□ -1.78
HMGN2P39-201ENST00000398005 POTEMA6NI47 508 aa3.93□□□□□ -1.78
HMGN2P39-201ENST00000398005 SPOCK2Q92563 424 aa3.93□□□□□ -1.78
HMGN2P39-201ENST00000398005 TSPYL2Q9H2G4 693 aaPredicted RBP3.93□□□□□ -1.78
HMGN2P39-201ENST00000398005 CCDC61Q9Y6R9 512 aa3.93□□□□□ -1.78
HMGN2P39-201ENST00000398005 ATN1P54259 1190 aaPredicted RBP3.92□□□□□ -1.78
HMGN2P39-201ENST00000398005 POTEGQ6S5H5 508 aa3.92□□□□□ -1.78
HMGN2P39-201ENST00000398005 POTEFA5A3E0 1075 aa3.91□□□□□ -1.78
HMGN2P39-201ENST00000398005 C7P10643 843 aa3.91□□□□□ -1.78
HMGN2P39-201ENST00000398005 SLC39A7Q92504 469 aa3.91□□□□□ -1.78
HMGN2P39-201ENST00000398005 KIF12Q96FN5 646 aa3.91□□□□□ -1.78
HMGN2P39-201ENST00000398005 TRPC6Q9Y210 931 aa3.91□□□□□ -1.78
HMGN2P39-201ENST00000398005 RGL2O15211 777 aa3.9□□□□□ -1.79
HMGN2P39-201ENST00000398005 LCE2DQ5TA82 110 aaPredicted RBP3.9□□□□□ -1.79
HMGN2P39-201ENST00000398005 CHGAP10645 457 aaKnown RBP3.89□□□□□ -1.79
HMGN2P39-201ENST00000398005 BMP2KQ9NSY1 1161 aaPredicted RBP3.89□□□□□ -1.79
HMGN2P39-201ENST00000398005 MAP3K13O43283 966 aa3.88□□□□□ -1.79
HMGN2P39-201ENST00000398005 RANGAP1P46060 587 aaPredicted RBP3.88□□□□□ -1.79
HMGN2P39-201ENST00000398005 RASEFQ8IZ41 740 aa3.88□□□□□ -1.79
HMGN2P39-201ENST00000398005 MAMSTRQ6ZN01 415 aa3.86□□□□□ -1.79
HMGN2P39-201ENST00000398005 MIER1Q8N108 512 aa3.86□□□□□ -1.79
HMGN2P39-201ENST00000398005 DNAJC5Q9H3Z4 198 aa3.86□□□□□ -1.79
HMGN2P39-201ENST00000398005 TIE1P35590 1138 aa3.85□□□□□ -1.79
HMGN2P39-201ENST00000398005 COLQQ9Y215 455 aaPredicted RBP3.85□□□□□ -1.79
HMGN2P39-201ENST00000398005 TTLL13PA6NNM8 815 aa3.84□□□□□ -1.79
HMGN2P39-201ENST00000398005 PLCD3Q8N3E9 789 aa3.84□□□□□ -1.79
HMGN2P39-201ENST00000398005 FAM163AQ96GL9 167 aaPredicted RBP3.84□□□□□ -1.79
HMGN2P39-201ENST00000398005 SCUBE2Q9NQ36 999 aa3.84□□□□□ -1.79
HMGN2P39-201ENST00000398005 PCDH10Q9P2E7 1040 aa3.84□□□□□ -1.79
HMGN2P39-201ENST00000398005 CIZ1Q9ULV3 898 aaPredicted RBP3.84□□□□□ -1.79
HMGN2P39-201ENST00000398005 SUPT5HO00267 1087 aaKnown RBP3.83□□□□□ -1.8
HMGN2P39-201ENST00000398005 PODXL2Q9NZ53 605 aa3.83□□□□□ -1.8
HMGN2P39-201ENST00000398005 PLEKHG5O94827 1062 aa3.82□□□□□ -1.8
HMGN2P39-201ENST00000398005 NUBP1P53384 320 aa3.82□□□□□ -1.8
HMGN2P39-201ENST00000398005 TRIM35Q9UPQ4 493 aa3.82□□□□□ -1.8
HMGN2P39-201ENST00000398005 SGIP1Q9BQI5 828 aa3.81□□□□□ -1.8
HMGN2P39-201ENST00000398005 PCDHB13Q9Y5F0 798 aa3.81□□□□□ -1.8
HMGN2P39-201ENST00000398005 SEC24BO95487 1268 aa3.8□□□□□ -1.8
HMGN2P39-201ENST00000398005 IFNL1Q8IU54 200 aa3.8□□□□□ -1.8
HMGN2P39-201ENST00000398005 HS6ST3Q8IZP7 471 aa3.8□□□□□ -1.8
HMGN2P39-201ENST00000398005 IER5LQ5T953 404 aa3.79□□□□□ -1.8
HMGN2P39-201ENST00000398005 ST18O60284 1047 aa3.77□□□□□ -1.81
HMGN2P39-201ENST00000398005 IRX5P78411 483 aaPredicted RBP3.77□□□□□ -1.81
HMGN2P39-201ENST00000398005 CDAN1Q8IWY9 1227 aa3.77□□□□□ -1.81
HMGN2P39-201ENST00000398005 TMEM106CQ9BVX2 250 aa3.77□□□□□ -1.81
HMGN2P39-201ENST00000398005 SLAIN1Q8ND83 568 aa3.76□□□□□ -1.81
HMGN2P39-201ENST00000398005 TRIM41Q8WV44 630 aa3.76□□□□□ -1.81
HMGN2P39-201ENST00000398005 ZBTB47Q9UFB7 747 aaPredicted RBP3.76□□□□□ -1.81
HMGN2P39-201ENST00000398005 FAM212AQ96EL1 285 aa3.75□□□□□ -1.81
HMGN2P39-201ENST00000398005 GTPBP6O43824 516 aaPredicted RBP3.74□□□□□ -1.81
HMGN2P39-201ENST00000398005 PYGBP11216 843 aa3.74□□□□□ -1.81
HMGN2P39-201ENST00000398005 PLCG2P16885 1265 aa3.74□□□□□ -1.81
HMGN2P39-201ENST00000398005 BRPF1P55201 1214 aaPredicted RBP3.74□□□□□ -1.81
HMGN2P39-201ENST00000398005 LMOD2Q6P5Q4 547 aa3.74□□□□□ -1.81
HMGN2P39-201ENST00000398005 P3H3Q8IVL6 736 aa3.74□□□□□ -1.81
HMGN2P39-201ENST00000398005 NKX1-1Q15270 411 aaPredicted RBP3.73□□□□□ -1.81
HMGN2P39-201ENST00000398005 NEUROD2Q15784 382 aa3.73□□□□□ -1.81
HMGN2P39-201ENST00000398005 PCDHB8Q9UN66 801 aa3.73□□□□□ -1.81
HMGN2P39-201ENST00000398005 UBTFP17480 764 aaKnown RBP3.72□□□□□ -1.81
HMGN2P39-201ENST00000398005 DCAF8Q5TAQ9 597 aa3.72□□□□□ -1.81
HMGN2P39-201ENST00000398005 NPM2Q86SE8 214 aaKnown RBP3.72□□□□□ -1.81
HMGN2P39-201ENST00000398005 OCEL1Q9H607 264 aa3.72□□□□□ -1.81
HMGN2P39-201ENST00000398005 STK25O00506 426 aa3.71□□□□□ -1.82
HMGN2P39-201ENST00000398005 TRIM26Q12899 539 aaPredicted RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms