RNA–Protein interactions for RNA: ENST00000397838.7

CEP290-202, Transcript of centrosomal protein 290, humanhuman

TSL 5 BASIC

Gene CEP290, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-202ENST00000397838 ZBTB47Q9UFB7 747 aaPredicted RBP12.04□□□□□ -0.48
CEP290-202ENST00000397838 NUBP1P53384 320 aa12.03□□□□□ -0.48
CEP290-202ENST00000397838 TRIM41Q8WV44 630 aa12.01□□□□□ -0.49
CEP290-202ENST00000397838 PLEKHG5O94827 1062 aa12.01□□□□□ -0.49
CEP290-202ENST00000397838 RIOK3O14730 519 aaKnown RBP11.99□□□□□ -0.49
CEP290-202ENST00000397838 STK25O00506 426 aa11.98□□□□□ -0.49
CEP290-202ENST00000397838 GSE1Q14687 1217 aa11.94□□□□□ -0.5
CEP290-202ENST00000397838 DCAF8Q5TAQ9 597 aa11.93□□□□□ -0.5
CEP290-202ENST00000397838 TMEM132AQ24JP5 1023 aa11.88□□□□□ -0.51
CEP290-202ENST00000397838 BCL11BQ9C0K0 894 aaPredicted RBP11.88□□□□□ -0.51
CEP290-202ENST00000397838 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.87□□□□□ -0.51
CEP290-202ENST00000397838 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
CEP290-202ENST00000397838 STK24Q9Y6E0 443 aa11.85□□□□□ -0.51
CEP290-202ENST00000397838 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
CEP290-202ENST00000397838 MNX1P50219 401 aaPredicted RBP11.84□□□□□ -0.51
CEP290-202ENST00000397838 RASEFQ8IZ41 740 aa11.83□□□□□ -0.52
CEP290-202ENST00000397838 CADPS2Q86UW7 1296 aa11.82□□□□□ -0.52
CEP290-202ENST00000397838 KCNV2Q8TDN2 545 aa11.81□□□□□ -0.52
CEP290-202ENST00000397838 CREBZFQ9NS37 354 aa11.79□□□□□ -0.52
CEP290-202ENST00000397838 PYGBP11216 843 aa11.78□□□□□ -0.52
CEP290-202ENST00000397838 FAM212AQ96EL1 285 aa11.78□□□□□ -0.52
CEP290-202ENST00000397838 ARXQ96QS3 562 aa11.76□□□□□ -0.53
CEP290-202ENST00000397838 LMOD2Q6P5Q4 547 aa11.75□□□□□ -0.53
CEP290-202ENST00000397838 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.75□□□□□ -0.53
CEP290-202ENST00000397838 C14orf37Q86TY3 774 aa11.72□□□□□ -0.53
CEP290-202ENST00000397838 CHRM1P11229 460 aaPredicted RBP11.71□□□□□ -0.53
CEP290-202ENST00000397838 SGIP1Q9BQI5 828 aa11.71□□□□□ -0.54
CEP290-202ENST00000397838 BRPF1P55201 1214 aaPredicted RBP11.7□□□□□ -0.54
CEP290-202ENST00000397838 CLEC11AQ9Y240 323 aa11.69□□□□□ -0.54
CEP290-202ENST00000397838 P3H3Q8IVL6 736 aa11.68□□□□□ -0.54
CEP290-202ENST00000397838 DAXXQ9UER7 740 aaPredicted RBP11.65□□□□□ -0.54
CEP290-202ENST00000397838 SPDYE1Q8NFV5 336 aaPredicted RBP11.62□□□□□ -0.55
CEP290-202ENST00000397838 PRR29P0C7W0 189 aa11.62□□□□□ -0.55
CEP290-202ENST00000397838 RYDENQ9NUL5 291 aaKnown RBP11.61□□□□□ -0.55
CEP290-202ENST00000397838 WDR70Q9NW82 654 aa11.58□□□□□ -0.56
CEP290-202ENST00000397838 ERICH6Q7L0X2 663 aa11.57□□□□□ -0.56
CEP290-202ENST00000397838 ZC3H15Q8WU90 426 aaKnown RBP11.57□□□□□ -0.56
CEP290-202ENST00000397838 MFRPQ9BY79 579 aa11.56□□□□□ -0.56
CEP290-202ENST00000397838 SUPT5HO00267 1087 aaKnown RBP11.55□□□□□ -0.56
CEP290-202ENST00000397838 POTEDQ86YR6 584 aa11.55□□□□□ -0.56
CEP290-202ENST00000397838 SLC24A3Q9HC58 644 aa11.55□□□□□ -0.56
CEP290-202ENST00000397838 SEMA3EO15041 775 aa11.54□□□□□ -0.56
CEP290-202ENST00000397838 HOMEZQ8IX15 550 aa11.54□□□□□ -0.56
CEP290-202ENST00000397838 PPP1R37O75864 691 aa11.54□□□□□ -0.56
CEP290-202ENST00000397838 PCDHB8Q9UN66 801 aa11.52□□□□□ -0.56
CEP290-202ENST00000397838 PCDHB13Q9Y5F0 798 aa11.52□□□□□ -0.56
CEP290-202ENST00000397838 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
CEP290-202ENST00000397838 REM2Q8IYK8 340 aaPredicted RBP11.5□□□□□ -0.57
CEP290-202ENST00000397838 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
CEP290-202ENST00000397838 TSPYL2Q9H2G4 693 aaPredicted RBP11.48□□□□□ -0.57
CEP290-202ENST00000397838 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
CEP290-202ENST00000397838 TESPA1A2RU30 521 aaPredicted RBP11.43□□□□□ -0.58
CEP290-202ENST00000397838 PDAP1Q13442 181 aaKnown RBP11.43□□□□□ -0.58
CEP290-202ENST00000397838 CHADLQ6NUI6 762 aa11.43□□□□□ -0.58
CEP290-202ENST00000397838 E2F4Q16254 413 aa11.41□□□□□ -0.58
CEP290-202ENST00000397838 PITPNM1O00562 1244 aa11.41□□□□□ -0.58
CEP290-202ENST00000397838 ZNF467Q7Z7K2 595 aaPredicted RBP11.41□□□□□ -0.58
CEP290-202ENST00000397838 CACNB1Q02641 598 aaPredicted RBP11.39□□□□□ -0.59
CEP290-202ENST00000397838 FBXO22Q8NEZ5 403 aa11.38□□□□□ -0.59
CEP290-202ENST00000397838 NCKAP5LQ9HCH0 1330 aa11.38□□□□□ -0.59
CEP290-202ENST00000397838 PSEN1P49768 467 aa11.38□□□□□ -0.59
CEP290-202ENST00000397838 ZMYND10O75800 440 aa11.37□□□□□ -0.59
CEP290-202ENST00000397838 PHF8Q9UPP1 1060 aa11.36□□□□□ -0.59
CEP290-202ENST00000397838 EFCAB3Q8N7B9 438 aa11.35□□□□□ -0.59
CEP290-202ENST00000397838 GPBP1L1Q9HC44 474 aaPredicted RBP11.35□□□□□ -0.59
CEP290-202ENST00000397838 RBM42Q9BTD8 480 aaKnown RBP11.34□□□□□ -0.59
CEP290-202ENST00000397838 CCDC61Q9Y6R9 512 aa11.33□□□□□ -0.6
CEP290-202ENST00000397838 CABP2Q9NPB3 220 aa11.3□□□□□ -0.6
CEP290-202ENST00000397838 IFNL1Q8IU54 200 aa11.29□□□□□ -0.6
CEP290-202ENST00000397838 LARP6Q9BRS8 491 aaKnown RBP11.28□□□□□ -0.6
CEP290-202ENST00000397838 UBTFP17480 764 aaKnown RBP11.27□□□□□ -0.6
CEP290-202ENST00000397838 ZNF579Q8NAF0 562 aaKnown RBP11.26□□□□□ -0.61
CEP290-202ENST00000397838 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
CEP290-202ENST00000397838 FARP1Q9Y4F1 1045 aaPredicted RBP11.25□□□□□ -0.61
CEP290-202ENST00000397838 BARGINQ6ZT62 677 aa11.24□□□□□ -0.61
CEP290-202ENST00000397838 MS4A4AQ96JQ5 239 aa11.24□□□□□ -0.61
CEP290-202ENST00000397838 MLLT3P42568 568 aaPredicted RBP11.24□□□□□ -0.61
CEP290-202ENST00000397838 IL27Q8NEV9 243 aa11.23□□□□□ -0.61
CEP290-202ENST00000397838 NLRP6P59044 892 aa11.22□□□□□ -0.61
CEP290-202ENST00000397838 MAP3K13O43283 966 aa11.21□□□□□ -0.61
CEP290-202ENST00000397838 CRISPLD2Q9H0B8 497 aa11.19□□□□□ -0.62
CEP290-202ENST00000397838 MFSD10Q14728 455 aa11.19□□□□□ -0.62
CEP290-202ENST00000397838 PODXL2Q9NZ53 605 aa11.17□□□□□ -0.62
CEP290-202ENST00000397838 SOX12O15370 315 aa11.16□□□□□ -0.62
CEP290-202ENST00000397838 DDX27Q96GQ7 796 aaKnown RBP11.16□□□□□ -0.62
CEP290-202ENST00000397838 KDM4CQ9H3R0 1056 aa11.16□□□□□ -0.62
CEP290-202ENST00000397838 CAMK2BQ13554 666 aa11.13□□□□□ -0.63
CEP290-202ENST00000397838 GPIHBP1Q8IV16 184 aa11.13□□□□□ -0.63
CEP290-202ENST00000397838 KIF12Q96FN5 646 aa11.13□□□□□ -0.63
CEP290-202ENST00000397838 AK7Q96M32 723 aa11.13□□□□□ -0.63
CEP290-202ENST00000397838 ARIH1Q9Y4X5 557 aaPredicted RBP11.13□□□□□ -0.63
CEP290-202ENST00000397838 PDE4AP27815 886 aa11.12□□□□□ -0.63
CEP290-202ENST00000397838 SMYD5Q6GMV2 418 aa11.12□□□□□ -0.63
CEP290-202ENST00000397838 C1orf115Q9H7X2 142 aa11.11□□□□□ -0.63
CEP290-202ENST00000397838 ZMYND15Q9H091 742 aa11.09□□□□□ -0.63
CEP290-202ENST00000397838 TRIM66O15016 1216 aa11.09□□□□□ -0.63
CEP290-202ENST00000397838 PRKAR2AP13861 404 aaKnown RBP11.08□□□□□ -0.64
CEP290-202ENST00000397838 KRI1Q8N9T8 703 aaKnown RBP11.08□□□□□ -0.64
CEP290-202ENST00000397838 PDE4DQ08499 809 aa11.07□□□□□ -0.64
CEP290-202ENST00000397838 TRIM26Q12899 539 aaPredicted RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms