RNA–Protein interactions for RNA: ENST00000397091.9

FGFR1-206, Transcript of fibroblast growth factor receptor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene FGFR1, Length 5,702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-206ENST00000397091 HNRNPUQ00839 825 aaKnown RBP eCLIP23.64■■□□□ 1.384e-7■■□□□ 13.9
FGFR1-206ENST00000397091 FAM9BQ8IZU0 186 aa23.64■■□□□ 1.37
FGFR1-206ENST00000397091 MIER1Q8N108 512 aa23.64■■□□□ 1.37
FGFR1-206ENST00000397091 HSP90AA1P07900 732 aaKnown RBP23.64■■□□□ 1.37
FGFR1-206ENST00000397091 TMC1Q8TDI8 760 aa23.63■■□□□ 1.37
FGFR1-206ENST00000397091 RRP7BPQ9NSQ0 103 aa23.62■■□□□ 1.37
FGFR1-206ENST00000397091 BAZ1BQ9UIG0 1483 aaKnown RBP23.6■■□□□ 1.37
FGFR1-206ENST00000397091 RSF1Q96T23 1441 aaPredicted RBP23.58■■□□□ 1.37
FGFR1-206ENST00000397091 LMOD2Q6P5Q4 547 aa23.55■■□□□ 1.36
FGFR1-206ENST00000397091 CFDP1Q9UEE9 299 aaPredicted RBP23.55■■□□□ 1.36
FGFR1-206ENST00000397091 UPF2Q9HAU5 1272 aaKnown RBP23.55■■□□□ 1.36
FGFR1-206ENST00000397091 DDX10Q13206 875 aaKnown RBP23.54■■□□□ 1.36
FGFR1-206ENST00000397091 ARXQ96QS3 562 aa23.54■■□□□ 1.36
FGFR1-206ENST00000397091 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
FGFR1-206ENST00000397091 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.52■■□□□ 1.36
FGFR1-206ENST00000397091 CCDC136Q96JN2 1154 aa23.51■■□□□ 1.35
FGFR1-206ENST00000397091 CLIP1P30622 1438 aa23.49■■□□□ 1.35
FGFR1-206ENST00000397091 MYH16Q9H6N6 1097 aa23.47■■□□□ 1.35
FGFR1-206ENST00000397091 NACADO15069 1562 aa23.43■■□□□ 1.34
FGFR1-206ENST00000397091 MLECQ14165 292 aa23.43■■□□□ 1.34
FGFR1-206ENST00000397091 POGKQ9P215 609 aa23.41■■□□□ 1.34
FGFR1-206ENST00000397091 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
FGFR1-206ENST00000397091 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
FGFR1-206ENST00000397091 NPHP1O15259 732 aa23.38■■□□□ 1.33
FGFR1-206ENST00000397091 MRS2Q9HD23 443 aa23.38■■□□□ 1.33
FGFR1-206ENST00000397091 IRX6P78412 446 aaPredicted RBP23.37■■□□□ 1.33
FGFR1-206ENST00000397091 CFAP53Q96M91 514 aa23.36■■□□□ 1.33
FGFR1-206ENST00000397091 EIF4G2P78344 907 aaKnown RBP eCLIP23.34■■□□□ 1.33
FGFR1-206ENST00000397091 WRNQ14191 1432 aaPredicted RBP eCLIP23.34■■□□□ 1.33
FGFR1-206ENST00000397091 CDCA8Q53HL2 280 aa23.34■■□□□ 1.33
FGFR1-206ENST00000397091 HDGFP51858 240 aaKnown RBP23.3■■□□□ 1.32
FGFR1-206ENST00000397091 GOLGA3Q08378 1498 aa23.27■■□□□ 1.32
FGFR1-206ENST00000397091 EEA1Q15075 1411 aa23.25■■□□□ 1.31
FGFR1-206ENST00000397091 KNSTRNQ9Y448 316 aa23.25■■□□□ 1.31
FGFR1-206ENST00000397091 HIRIP3Q9BW71 556 aaPredicted RBP23.24■■□□□ 1.31
FGFR1-206ENST00000397091 DDRGK1Q96HY6 314 aa23.24■■□□□ 1.31
FGFR1-206ENST00000397091 EIF4G1Q04637 1599 aaKnown RBP23.22■■□□□ 1.31
FGFR1-206ENST00000397091 CDK11BP21127 795 aaKnown RBP23.22■■□□□ 1.31
FGFR1-206ENST00000397091 SUPT16HQ9Y5B9 1047 aaKnown RBP23.22■■□□□ 1.31
FGFR1-206ENST00000397091 KANK1Q14678 1352 aa23.21■■□□□ 1.31
FGFR1-206ENST00000397091 RTN4Q9NQC3 1192 aaKnown RBP23.21■■□□□ 1.31
FGFR1-206ENST00000397091 CARD11Q9BXL7 1154 aa23.18■■□□□ 1.3
FGFR1-206ENST00000397091 CCNB3Q8WWL7 1395 aa23.18■■□□□ 1.3
FGFR1-206ENST00000397091 MAPK8IP3Q9UPT6 1336 aa23.15■■□□□ 1.3
FGFR1-206ENST00000397091 ERICH6BQ5W0A0 696 aa23.15■■□□□ 1.3
FGFR1-206ENST00000397091 MYO15BQ96JP2 1530 aa23.15■■□□□ 1.3
FGFR1-206ENST00000397091 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
FGFR1-206ENST00000397091 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
FGFR1-206ENST00000397091 TRIM44Q96DX7 344 aaPredicted RBP23.11■■□□□ 1.29
FGFR1-206ENST00000397091 NOP58Q9Y2X3 529 aaKnown RBP23.11■■□□□ 1.29
FGFR1-206ENST00000397091 GGT6Q6P531 493 aa23.11■■□□□ 1.29
FGFR1-206ENST00000397091 DEKP35659 375 aaKnown RBP23.07■■□□□ 1.28
FGFR1-206ENST00000397091 CEP162Q5TB80 1403 aa23.07■■□□□ 1.28
FGFR1-206ENST00000397091 SOX12O15370 315 aa23.05■■□□□ 1.28
FGFR1-206ENST00000397091 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
FGFR1-206ENST00000397091 NEUROD2Q15784 382 aa23.05■■□□□ 1.28
FGFR1-206ENST00000397091 BECN1Q14457 450 aa23.04■■□□□ 1.28
FGFR1-206ENST00000397091 CEP164Q9UPV0 1460 aa23.04■■□□□ 1.28
FGFR1-206ENST00000397091 PDS5BQ9NTI5 1447 aa23.03■■□□□ 1.28
FGFR1-206ENST00000397091 CUX2O14529 1486 aa23.03■■□□□ 1.28
FGFR1-206ENST00000397091 NAP1L5Q96NT1 182 aaPredicted RBP23.02■■□□□ 1.28
FGFR1-206ENST00000397091 CARMIL2Q6F5E8 1435 aa23.02■■□□□ 1.27
FGFR1-206ENST00000397091 BAZ1AQ9NRL2 1556 aaPredicted RBP23.01■■□□□ 1.27
FGFR1-206ENST00000397091 SRPK2P78362 688 aaKnown RBP23.01■■□□□ 1.27
FGFR1-206ENST00000397091 CARMIL1Q5VZK9 1371 aa23.01■■□□□ 1.27
FGFR1-206ENST00000397091 FTSJ3Q8IY81 847 aaKnown RBP22.99■■□□□ 1.27
FGFR1-206ENST00000397091 U2SURPO15042 1029 aaKnown RBP22.99■■□□□ 1.27
FGFR1-206ENST00000397091 GOLGA2Q08379 1002 aa22.97■■□□□ 1.27
FGFR1-206ENST00000397091 SAFB2Q14151 953 aaKnown RBP eCLIP22.97■■□□□ 1.27
FGFR1-206ENST00000397091 PPP4R2Q9NY27 417 aa22.97■■□□□ 1.27
FGFR1-206ENST00000397091 TULP1O00294 542 aaPredicted RBP22.95■■□□□ 1.27
FGFR1-206ENST00000397091 RBM19Q9Y4C8 960 aaKnown RBP22.95■■□□□ 1.26
FGFR1-206ENST00000397091 FHAD1B1AJZ9 1412 aa22.94■■□□□ 1.26
FGFR1-206ENST00000397091 CASC1Q6TDU7 716 aa22.93■■□□□ 1.26
FGFR1-206ENST00000397091 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
FGFR1-206ENST00000397091 OS9Q13438 667 aaPredicted RBP22.92■■□□□ 1.26
FGFR1-206ENST00000397091 STK26Q9P289 416 aa22.91■■□□□ 1.26
FGFR1-206ENST00000397091 CCDC9Q9Y3X0 531 aaKnown RBP22.91■■□□□ 1.26
FGFR1-206ENST00000397091 PAK3O75914 559 aaPredicted RBP22.91■■□□□ 1.26
FGFR1-206ENST00000397091 DCAF11Q8TEB1 546 aa22.91■■□□□ 1.26
FGFR1-206ENST00000397091 SENP3-EIF4A1A0A087X0R7 540 aa22.9■■□□□ 1.26
FGFR1-206ENST00000397091 CECR2Q9BXF3 1484 aa22.9■■□□□ 1.26
FGFR1-206ENST00000397091 CSB-PGBD3P0DP91 1061 aa22.9■■□□□ 1.26
FGFR1-206ENST00000397091 NCLP19338 710 aaKnown RBP22.89■■□□□ 1.25
FGFR1-206ENST00000397091 TMF1P82094 1093 aa22.87■■□□□ 1.25
FGFR1-206ENST00000397091 EFCAB2Q5VUJ9 269 aa22.87■■□□□ 1.25
FGFR1-206ENST00000397091 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
FGFR1-206ENST00000397091 CC2D1BQ5T0F9 858 aaKnown RBP22.87■■□□□ 1.25
FGFR1-206ENST00000397091 GOLGA6L22H0YM25 854 aa22.83■■□□□ 1.25
FGFR1-206ENST00000397091 AEBP2Q6ZN18 517 aaPredicted RBP22.81■■□□□ 1.24
FGFR1-206ENST00000397091 ZRSR1Q15695 479 aaKnown RBP22.81■■□□□ 1.24
FGFR1-206ENST00000397091 SOGA1O94964 1423 aa22.81■■□□□ 1.24
FGFR1-206ENST00000397091 EID1Q9Y6B2 187 aa22.81■■□□□ 1.24
FGFR1-206ENST00000397091 HDGFL2Q7Z4V5 671 aaPredicted RBP22.81■■□□□ 1.24
FGFR1-206ENST00000397091 TAOK2Q9UL54 1235 aa22.81■■□□□ 1.24
FGFR1-206ENST00000397091 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
FGFR1-206ENST00000397091 RTF1Q92541 710 aaKnown RBP22.79■■□□□ 1.24
FGFR1-206ENST00000397091 CHMP4BQ9H444 224 aaKnown RBP22.79■■□□□ 1.24
FGFR1-206ENST00000397091 TSHZ2Q9NRE2 1034 aa22.79■■□□□ 1.24
FGFR1-206ENST00000397091 FRAT1Q92837 279 aaPredicted RBP22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms