RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 MNX1P50219 401 aaPredicted RBP11.35□□□□□ -0.59
HMGB1P10-201ENST00000395823 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
HMGB1P10-201ENST00000395823 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
HMGB1P10-201ENST00000395823 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
HMGB1P10-201ENST00000395823 NKX1-1Q15270 411 aaPredicted RBP11.3□□□□□ -0.6
HMGB1P10-201ENST00000395823 RBM42Q9BTD8 480 aaKnown RBP11.3□□□□□ -0.6
HMGB1P10-201ENST00000395823 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
HMGB1P10-201ENST00000395823 DCAF8Q5TAQ9 597 aa11.28□□□□□ -0.6
HMGB1P10-201ENST00000395823 REM2Q8IYK8 340 aaPredicted RBP11.28□□□□□ -0.6
HMGB1P10-201ENST00000395823 CLEC11AQ9Y240 323 aa11.28□□□□□ -0.6
HMGB1P10-201ENST00000395823 PRR29P0C7W0 189 aa11.25□□□□□ -0.61
HMGB1P10-201ENST00000395823 RASEFQ8IZ41 740 aa11.25□□□□□ -0.61
HMGB1P10-201ENST00000395823 FAM212AQ96EL1 285 aa11.23□□□□□ -0.61
HMGB1P10-201ENST00000395823 GTPBP6O43824 516 aaPredicted RBP11.21□□□□□ -0.61
HMGB1P10-201ENST00000395823 TPRNQ4KMQ1 711 aa11.21□□□□□ -0.61
HMGB1P10-201ENST00000395823 CHRM1P11229 460 aaPredicted RBP11.2□□□□□ -0.62
HMGB1P10-201ENST00000395823 VGFO15240 615 aaPredicted RBP11.18□□□□□ -0.62
HMGB1P10-201ENST00000395823 STK25O00506 426 aa11.16□□□□□ -0.62
HMGB1P10-201ENST00000395823 PITPNM1O00562 1244 aa11.16□□□□□ -0.62
HMGB1P10-201ENST00000395823 SGIP1Q9BQI5 828 aa11.14□□□□□ -0.63
HMGB1P10-201ENST00000395823 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P10-201ENST00000395823 ZFP91Q96JP5 570 aaPredicted RBP11.12□□□□□ -0.63
HMGB1P10-201ENST00000395823 PYGBP11216 843 aa11.11□□□□□ -0.63
HMGB1P10-201ENST00000395823 BCL11BQ9C0K0 894 aaPredicted RBP11.1□□□□□ -0.63
HMGB1P10-201ENST00000395823 STK24Q9Y6E0 443 aa11.07□□□□□ -0.64
HMGB1P10-201ENST00000395823 NBR1Q14596 966 aa11.04□□□□□ -0.64
HMGB1P10-201ENST00000395823 CHADLQ6NUI6 762 aa11.01□□□□□ -0.65
HMGB1P10-201ENST00000395823 TSPYL2Q9H2G4 693 aaPredicted RBP10.96□□□□□ -0.65
HMGB1P10-201ENST00000395823 RYDENQ9NUL5 291 aaKnown RBP10.95□□□□□ -0.66
HMGB1P10-201ENST00000395823 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
HMGB1P10-201ENST00000395823 ZNF467Q7Z7K2 595 aaPredicted RBP10.92□□□□□ -0.66
HMGB1P10-201ENST00000395823 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
HMGB1P10-201ENST00000395823 PCDHB8Q9UN66 801 aa10.9□□□□□ -0.66
HMGB1P10-201ENST00000395823 PCDHB13Q9Y5F0 798 aa10.9□□□□□ -0.66
HMGB1P10-201ENST00000395823 PDAP1Q13442 181 aaKnown RBP10.89□□□□□ -0.67
HMGB1P10-201ENST00000395823 CCDC61Q9Y6R9 512 aa10.89□□□□□ -0.67
HMGB1P10-201ENST00000395823 MFRPQ9BY79 579 aa10.85□□□□□ -0.67
HMGB1P10-201ENST00000395823 PRKAR2AP13861 404 aaKnown RBP10.84□□□□□ -0.67
HMGB1P10-201ENST00000395823 PSEN1P49768 467 aa10.84□□□□□ -0.67
HMGB1P10-201ENST00000395823 ZNF579Q8NAF0 562 aaKnown RBP10.83□□□□□ -0.68
HMGB1P10-201ENST00000395823 FXR2P51116 673 aaKnown RBP eCLIP10.81□□□□□ -0.68
HMGB1P10-201ENST00000395823 KCNV2Q8TDN2 545 aa10.8□□□□□ -0.68
HMGB1P10-201ENST00000395823 IFNL1Q8IU54 200 aa10.78□□□□□ -0.68
HMGB1P10-201ENST00000395823 P3H3Q8IVL6 736 aa10.78□□□□□ -0.68
HMGB1P10-201ENST00000395823 PPP1R37O75864 691 aa10.76□□□□□ -0.69
HMGB1P10-201ENST00000395823 FBXO22Q8NEZ5 403 aa10.75□□□□□ -0.69
HMGB1P10-201ENST00000395823 MAP3K13O43283 966 aa10.74□□□□□ -0.69
HMGB1P10-201ENST00000395823 KIF12Q96FN5 646 aa10.74□□□□□ -0.69
HMGB1P10-201ENST00000395823 EFCAB3Q8N7B9 438 aa10.72□□□□□ -0.69
HMGB1P10-201ENST00000395823 WDR70Q9NW82 654 aa10.71□□□□□ -0.69
HMGB1P10-201ENST00000395823 PIP4P2Q8N4L2 257 aa10.7□□□□□ -0.7
HMGB1P10-201ENST00000395823 CABP2Q9NPB3 220 aa10.69□□□□□ -0.7
HMGB1P10-201ENST00000395823 PHF8Q9UPP1 1060 aa10.69□□□□□ -0.7
HMGB1P10-201ENST00000395823 PAK3O75914 559 aaPredicted RBP10.67□□□□□ -0.7
HMGB1P10-201ENST00000395823 CHRDL2Q6WN34 429 aa10.67□□□□□ -0.7
HMGB1P10-201ENST00000395823 NLRP6P59044 892 aa10.66□□□□□ -0.7
HMGB1P10-201ENST00000395823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.66□□□□□ -0.7
HMGB1P10-201ENST00000395823 SOX12O15370 315 aa10.65□□□□□ -0.7
HMGB1P10-201ENST00000395823 LMOD2Q6P5Q4 547 aa10.64□□□□□ -0.71
HMGB1P10-201ENST00000395823 MS4A4AQ96JQ5 239 aa10.62□□□□□ -0.71
HMGB1P10-201ENST00000395823 PHF12Q96QT6 1004 aa10.62□□□□□ -0.71
HMGB1P10-201ENST00000395823 NCKAP5LQ9HCH0 1330 aa10.6□□□□□ -0.71
HMGB1P10-201ENST00000395823 ARHGEF1Q92888 912 aaKnown RBP10.6□□□□□ -0.71
HMGB1P10-201ENST00000395823 ZRANB1Q9UGI0 708 aa10.59□□□□□ -0.71
HMGB1P10-201ENST00000395823 E2F4Q16254 413 aa10.58□□□□□ -0.72
HMGB1P10-201ENST00000395823 CD44P16070 742 aaKnown RBP10.57□□□□□ -0.72
HMGB1P10-201ENST00000395823 TRPC6Q9Y210 931 aa10.55□□□□□ -0.72
HMGB1P10-201ENST00000395823 SEMA3EO15041 775 aa10.54□□□□□ -0.72
HMGB1P10-201ENST00000395823 TESPA1A2RU30 521 aaPredicted RBP10.53□□□□□ -0.72
HMGB1P10-201ENST00000395823 MFSD10Q14728 455 aa10.53□□□□□ -0.72
HMGB1P10-201ENST00000395823 CRISPLD2Q9H0B8 497 aa10.53□□□□□ -0.72
HMGB1P10-201ENST00000395823 LARP6Q9BRS8 491 aaKnown RBP10.51□□□□□ -0.73
HMGB1P10-201ENST00000395823 TMEM106CQ9BVX2 250 aa10.51□□□□□ -0.73
HMGB1P10-201ENST00000395823 TIMELESSQ9UNS1 1208 aa10.51□□□□□ -0.73
HMGB1P10-201ENST00000395823 MS4A3Q96HJ5 214 aa10.5□□□□□ -0.73
HMGB1P10-201ENST00000395823 TMEM132AQ24JP5 1023 aa10.49□□□□□ -0.73
HMGB1P10-201ENST00000395823 ZC3H15Q8WU90 426 aaKnown RBP10.49□□□□□ -0.73
HMGB1P10-201ENST00000395823 GTF3C3Q9Y5Q9 886 aa10.48□□□□□ -0.73
HMGB1P10-201ENST00000395823 TULP1O00294 542 aaPredicted RBP10.47□□□□□ -0.73
HMGB1P10-201ENST00000395823 PDE4AP27815 886 aa10.46□□□□□ -0.73
HMGB1P10-201ENST00000395823 ARIH1Q9Y4X5 557 aaPredicted RBP10.46□□□□□ -0.73
HMGB1P10-201ENST00000395823 BRPF1P55201 1214 aaPredicted RBP10.45□□□□□ -0.74
HMGB1P10-201ENST00000395823 CAMK2BQ13554 666 aa10.45□□□□□ -0.74
HMGB1P10-201ENST00000395823 ILDR1Q86SU0 546 aaPredicted RBP10.44□□□□□ -0.74
HMGB1P10-201ENST00000395823 DDX27Q96GQ7 796 aaKnown RBP10.44□□□□□ -0.74
HMGB1P10-201ENST00000395823 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
HMGB1P10-201ENST00000395823 GOLGA2Q08379 1002 aa10.42□□□□□ -0.74
HMGB1P10-201ENST00000395823 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
HMGB1P10-201ENST00000395823 MKRN3Q13064 507 aaKnown RBP10.39□□□□□ -0.75
HMGB1P10-201ENST00000395823 TIE1P35590 1138 aa10.38□□□□□ -0.75
HMGB1P10-201ENST00000395823 SLC24A3Q9HC58 644 aa10.38□□□□□ -0.75
HMGB1P10-201ENST00000395823 BMP2KQ9NSY1 1161 aaPredicted RBP10.37□□□□□ -0.75
HMGB1P10-201ENST00000395823 ZMYND10O75800 440 aa10.36□□□□□ -0.75
HMGB1P10-201ENST00000395823 PPP1R15BQ5SWA1 713 aa10.34□□□□□ -0.75
HMGB1P10-201ENST00000395823 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.75
HMGB1P10-201ENST00000395823 MLLT3P42568 568 aaPredicted RBP10.33□□□□□ -0.76
HMGB1P10-201ENST00000395823 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
HMGB1P10-201ENST00000395823 SMYD5Q6GMV2 418 aa10.32□□□□□ -0.76
HMGB1P10-201ENST00000395823 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
HMGB1P10-201ENST00000395823 NEUROD2Q15784 382 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms