RNA–Protein interactions for RNA: ENST00000395713.6

TRPS1-202, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 3

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-202ENST00000395713 CHRDL2Q6WN34 429 aa11.57□□□□□ -0.56
TRPS1-202ENST00000395713 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
TRPS1-202ENST00000395713 RNF25Q96BH1 459 aaPredicted RBP11.55□□□□□ -0.56
TRPS1-202ENST00000395713 BBXQ8WY36 941 aaPredicted RBP11.53□□□□□ -0.56
TRPS1-202ENST00000395713 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
TRPS1-202ENST00000395713 PIP4P2Q8N4L2 257 aa11.51□□□□□ -0.57
TRPS1-202ENST00000395713 PYGBP11216 843 aa11.49□□□□□ -0.57
TRPS1-202ENST00000395713 CHRM1P11229 460 aaPredicted RBP11.49□□□□□ -0.57
TRPS1-202ENST00000395713 TSPYL2Q9H2G4 693 aaPredicted RBP11.49□□□□□ -0.57
TRPS1-202ENST00000395713 RIOK3O14730 519 aaKnown RBP11.47□□□□□ -0.57
TRPS1-202ENST00000395713 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.47□□□□□ -0.57
TRPS1-202ENST00000395713 HAP1P54257 671 aaPredicted RBP11.44□□□□□ -0.58
TRPS1-202ENST00000395713 PAXIP1Q6ZW49 1069 aaPredicted RBP11.42□□□□□ -0.58
TRPS1-202ENST00000395713 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
TRPS1-202ENST00000395713 CFAP44Q96MT7 982 aa11.41□□□□□ -0.58
TRPS1-202ENST00000395713 TAOK2Q9UL54 1235 aa11.41□□□□□ -0.58
TRPS1-202ENST00000395713 VGFO15240 615 aaPredicted RBP11.39□□□□□ -0.59
TRPS1-202ENST00000395713 CCDC61Q9Y6R9 512 aa11.37□□□□□ -0.59
TRPS1-202ENST00000395713 SPRYD3Q8NCJ5 442 aa11.36□□□□□ -0.59
TRPS1-202ENST00000395713 STK25O00506 426 aa11.34□□□□□ -0.59
TRPS1-202ENST00000395713 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
TRPS1-202ENST00000395713 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.33□□□□□ -0.6
TRPS1-202ENST00000395713 ZFP91Q96JP5 570 aaPredicted RBP11.33□□□□□ -0.6
TRPS1-202ENST00000395713 SGIP1Q9BQI5 828 aa11.33□□□□□ -0.6
TRPS1-202ENST00000395713 DNAJC5Q9H3Z4 198 aa11.32□□□□□ -0.6
TRPS1-202ENST00000395713 ZNF467Q7Z7K2 595 aaPredicted RBP11.3□□□□□ -0.6
TRPS1-202ENST00000395713 BCL11BQ9C0K0 894 aaPredicted RBP11.29□□□□□ -0.6
TRPS1-202ENST00000395713 PCDHB8Q9UN66 801 aa11.29□□□□□ -0.6
TRPS1-202ENST00000395713 PCDHB13Q9Y5F0 798 aa11.29□□□□□ -0.6
TRPS1-202ENST00000395713 STK24Q9Y6E0 443 aa11.29□□□□□ -0.6
TRPS1-202ENST00000395713 NKX1-1Q15270 411 aaPredicted RBP11.28□□□□□ -0.6
TRPS1-202ENST00000395713 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.61
TRPS1-202ENST00000395713 ZRANB1Q9UGI0 708 aa11.27□□□□□ -0.61
TRPS1-202ENST00000395713 ZNF579Q8NAF0 562 aaKnown RBP11.25□□□□□ -0.61
TRPS1-202ENST00000395713 MAP3K13O43283 966 aa11.24□□□□□ -0.61
TRPS1-202ENST00000395713 VSIG10Q8N0Z9 540 aa11.24□□□□□ -0.61
TRPS1-202ENST00000395713 KIF12Q96FN5 646 aa11.24□□□□□ -0.61
TRPS1-202ENST00000395713 PDAP1Q13442 181 aaKnown RBP11.23□□□□□ -0.61
TRPS1-202ENST00000395713 TSHZ2Q9NRE2 1034 aa11.23□□□□□ -0.61
TRPS1-202ENST00000395713 IFNL1Q8IU54 200 aa11.21□□□□□ -0.61
TRPS1-202ENST00000395713 GTPBP6O43824 516 aaPredicted RBP11.2□□□□□ -0.62
TRPS1-202ENST00000395713 PSEN1P49768 467 aa11.2□□□□□ -0.62
TRPS1-202ENST00000395713 PHF12Q96QT6 1004 aa11.19□□□□□ -0.62
TRPS1-202ENST00000395713 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
TRPS1-202ENST00000395713 KDM2AQ9Y2K7 1162 aa11.18□□□□□ -0.62
TRPS1-202ENST00000395713 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
TRPS1-202ENST00000395713 RYDENQ9NUL5 291 aaKnown RBP11.09□□□□□ -0.63
TRPS1-202ENST00000395713 MS4A3Q96HJ5 214 aa11.07□□□□□ -0.64
TRPS1-202ENST00000395713 CABP2Q9NPB3 220 aa11.06□□□□□ -0.64
TRPS1-202ENST00000395713 HAX1O00165 279 aa11.05□□□□□ -0.64
TRPS1-202ENST00000395713 EFCAB3Q8N7B9 438 aa11.05□□□□□ -0.64
TRPS1-202ENST00000395713 MFRPQ9BY79 579 aa11.04□□□□□ -0.64
TRPS1-202ENST00000395713 TRPC6Q9Y210 931 aa11.04□□□□□ -0.64
TRPS1-202ENST00000395713 EVX2Q03828 476 aa11.02□□□□□ -0.65
TRPS1-202ENST00000395713 TMEM106CQ9BVX2 250 aa11□□□□□ -0.65
TRPS1-202ENST00000395713 SOX12O15370 315 aa10.99□□□□□ -0.65
TRPS1-202ENST00000395713 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
TRPS1-202ENST00000395713 NLRP6P59044 892 aa10.97□□□□□ -0.65
TRPS1-202ENST00000395713 GALR2O43603 387 aaPredicted RBP10.96□□□□□ -0.65
TRPS1-202ENST00000395713 FBXO22Q8NEZ5 403 aa10.96□□□□□ -0.65
TRPS1-202ENST00000395713 BCANQ96GW7 911 aa10.96□□□□□ -0.65
TRPS1-202ENST00000395713 PPP1R37O75864 691 aa10.94□□□□□ -0.66
TRPS1-202ENST00000395713 TIE1P35590 1138 aa10.94□□□□□ -0.66
TRPS1-202ENST00000395713 GOLGA2Q08379 1002 aa10.94□□□□□ -0.66
TRPS1-202ENST00000395713 TTLL13PA6NNM8 815 aa10.92□□□□□ -0.66
TRPS1-202ENST00000395713 CADPS2Q86UW7 1296 aa10.91□□□□□ -0.66
TRPS1-202ENST00000395713 BMP2KQ9NSY1 1161 aaPredicted RBP10.91□□□□□ -0.66
TRPS1-202ENST00000395713 MKRN3Q13064 507 aaKnown RBP10.89□□□□□ -0.67
TRPS1-202ENST00000395713 CLCN6P51797 869 aa10.88□□□□□ -0.67
TRPS1-202ENST00000395713 MS4A4AQ96JQ5 239 aa10.88□□□□□ -0.67
TRPS1-202ENST00000395713 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
TRPS1-202ENST00000395713 ATN1P54259 1190 aaPredicted RBP10.81□□□□□ -0.68
TRPS1-202ENST00000395713 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRPS1-202ENST00000395713 GABBR2O75899 941 aa10.8□□□□□ -0.68
TRPS1-202ENST00000395713 WDR70Q9NW82 654 aa10.8□□□□□ -0.68
TRPS1-202ENST00000395713 ATMINO43313 823 aaPredicted RBP10.79□□□□□ -0.68
TRPS1-202ENST00000395713 ILDR1Q86SU0 546 aaPredicted RBP10.78□□□□□ -0.68
TRPS1-202ENST00000395713 NBR1Q14596 966 aa10.76□□□□□ -0.69
TRPS1-202ENST00000395713 ASTLQ6HA08 431 aaPredicted RBP10.76□□□□□ -0.69
TRPS1-202ENST00000395713 DPY19L2Q6NUT2 758 aa10.74□□□□□ -0.69
TRPS1-202ENST00000395713 NCKAP5LQ9HCH0 1330 aa10.72□□□□□ -0.69
TRPS1-202ENST00000395713 P3H3Q8IVL6 736 aa10.71□□□□□ -0.69
TRPS1-202ENST00000395713 PDE4AP27815 886 aa10.7□□□□□ -0.7
TRPS1-202ENST00000395713 IRX5P78411 483 aaPredicted RBP10.7□□□□□ -0.7
TRPS1-202ENST00000395713 KCNV2Q8TDN2 545 aa10.7□□□□□ -0.7
TRPS1-202ENST00000395713 IER5LQ5T953 404 aa10.69□□□□□ -0.7
TRPS1-202ENST00000395713 PDCD7Q8N8D1 485 aaKnown RBP10.69□□□□□ -0.7
TRPS1-202ENST00000395713 DCBLD2Q96PD2 775 aa10.69□□□□□ -0.7
TRPS1-202ENST00000395713 LARP6Q9BRS8 491 aaKnown RBP10.69□□□□□ -0.7
TRPS1-202ENST00000395713 PRKCSHP14314 528 aaPredicted RBP10.67□□□□□ -0.7
TRPS1-202ENST00000395713 PELP1Q8IZL8 1130 aaKnown RBP10.67□□□□□ -0.7
TRPS1-202ENST00000395713 CRISPLD2Q9H0B8 497 aa10.67□□□□□ -0.7
TRPS1-202ENST00000395713 OCEL1Q9H607 264 aa10.67□□□□□ -0.7
TRPS1-202ENST00000395713 MFSD10Q14728 455 aa10.64□□□□□ -0.71
TRPS1-202ENST00000395713 E2F4Q16254 413 aa10.64□□□□□ -0.71
TRPS1-202ENST00000395713 MICALL2Q8IY33 904 aa10.64□□□□□ -0.71
TRPS1-202ENST00000395713 PLCG2P16885 1265 aa10.63□□□□□ -0.71
TRPS1-202ENST00000395713 TPRNQ4KMQ1 711 aa10.62□□□□□ -0.71
TRPS1-202ENST00000395713 DDX27Q96GQ7 796 aaKnown RBP10.62□□□□□ -0.71
TRPS1-202ENST00000395713 COLQQ9Y215 455 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms