RNA–Protein interactions for RNA: ENST00000395489.6

A1CF-206, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 9,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-206ENST00000395489 TSPYL1Q9H0U9 437 aa8.52□□□□□ -1.05
A1CF-206ENST00000395489 MSNP26038 577 aaKnown RBP8.52□□□□□ -1.05
A1CF-206ENST00000395489 UBTFP17480 764 aaKnown RBP8.52□□□□□ -1.05
A1CF-206ENST00000395489 CANXP27824 592 aaKnown RBP8.52□□□□□ -1.05
A1CF-206ENST00000395489 GOLGA6L6A8MZA4 724 aa8.51□□□□□ -1.05
A1CF-206ENST00000395489 TNNT3P45378 269 aaPredicted RBP8.5□□□□□ -1.05
A1CF-206ENST00000395489 TPM2P07951 284 aa8.49□□□□□ -1.05
A1CF-206ENST00000395489 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.49□□□□□ -1.05
A1CF-206ENST00000395489 TSHZ2Q9NRE2 1034 aa8.49□□□□□ -1.05
A1CF-206ENST00000395489 ISY1Q9ULR0 285 aaKnown RBP8.49□□□□□ -1.05
A1CF-206ENST00000395489 PDE4CQ08493 712 aa8.48□□□□□ -1.05
A1CF-206ENST00000395489 PTMAP06454 111 aaKnown RBP8.48□□□□□ -1.05
A1CF-206ENST00000395489 FAM43AQ8N2R8 423 aa8.47□□□□□ -1.05
A1CF-206ENST00000395489 IPO9Q96P70 1041 aaKnown RBP8.47□□□□□ -1.05
A1CF-206ENST00000395489 GOLGA6L1Q8N7Z2 621 aa8.47□□□□□ -1.05
A1CF-206ENST00000395489 CCER2I3L3R5 266 aa8.46□□□□□ -1.05
A1CF-206ENST00000395489 DNTTIP2Q5QJE6 756 aaKnown RBP8.46□□□□□ -1.05
A1CF-206ENST00000395489 CCDC66A2RUB6 948 aa8.46□□□□□ -1.06
A1CF-206ENST00000395489 APPP05067 770 aa8.46□□□□□ -1.06
A1CF-206ENST00000395489 NRDCO43847 1150 aa8.45□□□□□ -1.06
A1CF-206ENST00000395489 CSPP1Q1MSJ5 1256 aa8.44□□□□□ -1.06
A1CF-206ENST00000395489 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.43□□□□□ -1.06
A1CF-206ENST00000395489 GSE1Q14687 1217 aa8.43□□□□□ -1.06
A1CF-206ENST00000395489 CFAP44Q96MT7 982 aa8.43□□□□□ -1.06
A1CF-206ENST00000395489 TCERG1O14776 1098 aaKnown RBP8.43□□□□□ -1.06
A1CF-206ENST00000395489 ARID3AQ99856 593 aa8.43□□□□□ -1.06
A1CF-206ENST00000395489 HSP90B1P14625 803 aaKnown RBP8.42□□□□□ -1.06
A1CF-206ENST00000395489 TIMELESSQ9UNS1 1208 aa8.42□□□□□ -1.06
A1CF-206ENST00000395489 NOM1Q5C9Z4 860 aaKnown RBP8.41□□□□□ -1.06
A1CF-206ENST00000395489 AMER1Q5JTC6 1135 aaPredicted RBP8.41□□□□□ -1.06
A1CF-206ENST00000395489 MIER1Q8N108 512 aa8.41□□□□□ -1.06
A1CF-206ENST00000395489 AXDND1Q5T1B0 1012 aaPredicted RBP8.41□□□□□ -1.06
A1CF-206ENST00000395489 SETQ01105 290 aaPredicted RBP8.4□□□□□ -1.06
A1CF-206ENST00000395489 NPM2Q86SE8 214 aaKnown RBP8.4□□□□□ -1.06
A1CF-206ENST00000395489 HNRNPUQ00839 825 aaKnown RBP eCLIP8.39□□□□□ -1.07
A1CF-206ENST00000395489 PDIA4P13667 645 aaKnown RBP8.38□□□□□ -1.07
A1CF-206ENST00000395489 KIAA2012Q0VF49 1180 aa8.38□□□□□ -1.07
A1CF-206ENST00000395489 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.37□□□□□ -1.07
A1CF-206ENST00000395489 RTN4Q9NQC3 1192 aaKnown RBP8.36□□□□□ -1.07
A1CF-206ENST00000395489 LOC105371045A0A1W2PR82 267 aa8.35□□□□□ -1.07
A1CF-206ENST00000395489 CWC15Q9P013 229 aaKnown RBP8.35□□□□□ -1.07
A1CF-206ENST00000395489 BRD2P25440 801 aaKnown RBP8.34□□□□□ -1.07
A1CF-206ENST00000395489 SKOR2Q2VWA4 1001 aaPredicted RBP8.34□□□□□ -1.07
A1CF-206ENST00000395489 DDX11L8A8MPP1 907 aa8.34□□□□□ -1.07
A1CF-206ENST00000395489 GBP4Q96PP9 640 aa8.34□□□□□ -1.07
A1CF-206ENST00000395489 HMGN5P82970 282 aaKnown RBP8.34□□□□□ -1.07
A1CF-206ENST00000395489 GPS2Q13227 327 aa8.34□□□□□ -1.07
A1CF-206ENST00000395489 HTATSF1O43719 755 aaKnown RBP8.33□□□□□ -1.08
A1CF-206ENST00000395489 SYAP1Q96A49 352 aaPredicted RBP8.33□□□□□ -1.08
A1CF-206ENST00000395489 PDCL3Q9H2J4 239 aa8.32□□□□□ -1.08
A1CF-206ENST00000395489 TONSLQ96HA7 1378 aa8.32□□□□□ -1.08
A1CF-206ENST00000395489 HNRNPUL2Q1KMD3 747 aaKnown RBP8.32□□□□□ -1.08
A1CF-206ENST00000395489 FBXO3Q9UK99 471 aa8.32□□□□□ -1.08
A1CF-206ENST00000395489 MS4A1P11836 297 aa8.32□□□□□ -1.08
A1CF-206ENST00000395489 MYH16Q9H6N6 1097 aa8.32□□□□□ -1.08
A1CF-206ENST00000395489 TEX35Q5T0J7 233 aa8.31□□□□□ -1.08
A1CF-206ENST00000395489 PHF14O94880 888 aa8.3□□□□□ -1.08
A1CF-206ENST00000395489 BCCIPQ9P287 314 aaKnown RBP eCLIP8.3□□□□□ -1.08
A1CF-206ENST00000395489 CHMP4BQ9H444 224 aaKnown RBP8.29□□□□□ -1.08
A1CF-206ENST00000395489 ANO8Q9HCE9 1232 aaPredicted RBP8.28□□□□□ -1.08
A1CF-206ENST00000395489 C11orf95C9JLR9 678 aaPredicted RBP8.28□□□□□ -1.08
A1CF-206ENST00000395489 CLGNO14967 610 aa8.28□□□□□ -1.08
A1CF-206ENST00000395489 SSR1P43307 286 aaKnown RBP8.28□□□□□ -1.08
A1CF-206ENST00000395489 CTR9Q6PD62 1173 aa8.27□□□□□ -1.09
A1CF-206ENST00000395489 USP8P40818 1118 aa8.27□□□□□ -1.09
A1CF-206ENST00000395489 PDCL2Q8N4E4 241 aa8.26□□□□□ -1.09
A1CF-206ENST00000395489 PES1O00541 588 aaKnown RBP8.25□□□□□ -1.09
A1CF-206ENST00000395489 CALD1Q05682 793 aaKnown RBP8.25□□□□□ -1.09
A1CF-206ENST00000395489 C14orf37Q86TY3 774 aa8.25□□□□□ -1.09
A1CF-206ENST00000395489 CC2D1BQ5T0F9 858 aaKnown RBP8.25□□□□□ -1.09
A1CF-206ENST00000395489 CAVIN1Q6NZI2 390 aaKnown RBP8.24□□□□□ -1.09
A1CF-206ENST00000395489 DNAJC2Q99543 621 aaKnown RBP8.24□□□□□ -1.09
A1CF-206ENST00000395489 MYO15BQ96JP2 1530 aa8.24□□□□□ -1.09
A1CF-206ENST00000395489 HMGB1P1B2RPK0 211 aaPredicted RBP8.24□□□□□ -1.09
A1CF-206ENST00000395489 ZMYND15Q9H091 742 aa8.23□□□□□ -1.09
A1CF-206ENST00000395489 ATP1B4Q9UN42 357 aaPredicted RBP8.23□□□□□ -1.09
A1CF-206ENST00000395489 CASC1Q6TDU7 716 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 HSCBQ8IWL3 235 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 TPM3P06753 285 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 PHLDB1Q86UU1 1377 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 MRE11P49959 708 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 DHX8Q14562 1220 aaKnown RBP8.22□□□□□ -1.09
A1CF-206ENST00000395489 ITGAEP38570 1179 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 RBM28Q9NW13 759 aaKnown RBP8.22□□□□□ -1.09
A1CF-206ENST00000395489 SALL2Q9Y467 1007 aaPredicted RBP8.22□□□□□ -1.09
A1CF-206ENST00000395489 KIF20AO95235 890 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 ZNF771Q7L3S4 317 aaPredicted RBP8.22□□□□□ -1.09
A1CF-206ENST00000395489 KIF3AQ9Y496 699 aa8.22□□□□□ -1.09
A1CF-206ENST00000395489 CLSTN1O94985 981 aa8.21□□□□□ -1.1
A1CF-206ENST00000395489 LETM1O95202 739 aaPredicted RBP8.21□□□□□ -1.1
A1CF-206ENST00000395489 IRX3P78415 501 aaPredicted RBP8.21□□□□□ -1.1
A1CF-206ENST00000395489 MNS1Q8NEH6 495 aa8.2□□□□□ -1.1
A1CF-206ENST00000395489 GOLGA6L4A6NEF3 574 aa8.2□□□□□ -1.1
A1CF-206ENST00000395489 DIAPH3Q9NSV4 1193 aa8.2□□□□□ -1.1
A1CF-206ENST00000395489 TRIM52Q96A61 297 aa8.2□□□□□ -1.1
A1CF-206ENST00000395489 CCDC9Q9Y3X0 531 aaKnown RBP8.19□□□□□ -1.1
A1CF-206ENST00000395489 MRS2Q9HD23 443 aa8.19□□□□□ -1.1
A1CF-206ENST00000395489 ZRSR1Q15695 479 aaKnown RBP8.19□□□□□ -1.1
A1CF-206ENST00000395489 AAMPQ13685 434 aa8.19□□□□□ -1.1
A1CF-206ENST00000395489 CALCOCO1Q9P1Z2 691 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms