RNA–Protein interactions for RNA: ENST00000394315.3

MRRF-208, Transcript of mitochondrial ribosome recycling factor, humanhuman

TSL 1 (best) BASIC

Gene MRRF, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRRF-208ENST00000394315 KLHL34Q8N239 644 aa12.91□□□□□ -0.34
MRRF-208ENST00000394315 GALR2O43603 387 aaPredicted RBP12.89□□□□□ -0.35
MRRF-208ENST00000394315 DCBLD2Q96PD2 775 aa12.88□□□□□ -0.35
MRRF-208ENST00000394315 FAM212AQ96EL1 285 aa12.85□□□□□ -0.35
MRRF-208ENST00000394315 POTEIP0CG38 1075 aa12.83□□□□□ -0.36
MRRF-208ENST00000394315 KIF12Q96FN5 646 aa12.83□□□□□ -0.36
MRRF-208ENST00000394315 IFNLR1Q8IU57 520 aaPredicted RBP12.8□□□□□ -0.36
MRRF-208ENST00000394315 MS4A3Q96HJ5 214 aa12.8□□□□□ -0.36
MRRF-208ENST00000394315 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
MRRF-208ENST00000394315 MAP3K13O43283 966 aa12.77□□□□□ -0.37
MRRF-208ENST00000394315 SPOCK2Q92563 424 aa12.72□□□□□ -0.37
MRRF-208ENST00000394315 GSE1Q14687 1217 aa12.71□□□□□ -0.38
MRRF-208ENST00000394315 SGIP1Q9BQI5 828 aa12.71□□□□□ -0.38
MRRF-208ENST00000394315 PCDHB13Q9Y5F0 798 aa12.69□□□□□ -0.38
MRRF-208ENST00000394315 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
MRRF-208ENST00000394315 PYGBP11216 843 aa12.66□□□□□ -0.38
MRRF-208ENST00000394315 ATMINO43313 823 aaPredicted RBP12.64□□□□□ -0.39
MRRF-208ENST00000394315 LHX8Q68G74 356 aa12.62□□□□□ -0.39
MRRF-208ENST00000394315 IFNL1Q8IU54 200 aa12.62□□□□□ -0.39
MRRF-208ENST00000394315 PELP1Q8IZL8 1130 aaKnown RBP12.62□□□□□ -0.39
MRRF-208ENST00000394315 TRPC6Q9Y210 931 aa12.62□□□□□ -0.39
MRRF-208ENST00000394315 TIE1P35590 1138 aa12.61□□□□□ -0.39
MRRF-208ENST00000394315 CIZ1Q9ULV3 898 aaPredicted RBP12.6□□□□□ -0.39
MRRF-208ENST00000394315 BMP2KQ9NSY1 1161 aaPredicted RBP12.59□□□□□ -0.39
MRRF-208ENST00000394315 CHRM1P11229 460 aaPredicted RBP12.57□□□□□ -0.4
MRRF-208ENST00000394315 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
MRRF-208ENST00000394315 C7P10643 843 aa12.55□□□□□ -0.4
MRRF-208ENST00000394315 SLC39A7Q92504 469 aa12.55□□□□□ -0.4
MRRF-208ENST00000394315 TTLL13PA6NNM8 815 aa12.54□□□□□ -0.4
MRRF-208ENST00000394315 PCDHB8Q9UN66 801 aa12.52□□□□□ -0.4
MRRF-208ENST00000394315 METRNQ9UJH8 293 aa12.52□□□□□ -0.41
MRRF-208ENST00000394315 ZNF467Q7Z7K2 595 aaPredicted RBP12.5□□□□□ -0.41
MRRF-208ENST00000394315 TMEM106CQ9BVX2 250 aa12.5□□□□□ -0.41
MRRF-208ENST00000394315 TRIM41Q8WV44 630 aa12.46□□□□□ -0.42
MRRF-208ENST00000394315 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.42
MRRF-208ENST00000394315 POTEB2H3BUK9 544 aa12.42□□□□□ -0.42
MRRF-208ENST00000394315 IER5LQ5T953 404 aa12.41□□□□□ -0.42
MRRF-208ENST00000394315 SEC24BO95487 1268 aa12.39□□□□□ -0.43
MRRF-208ENST00000394315 PSEN1P49768 467 aa12.37□□□□□ -0.43
MRRF-208ENST00000394315 PDAP1Q13442 181 aaKnown RBP12.36□□□□□ -0.43
MRRF-208ENST00000394315 POTEFA5A3E0 1075 aa12.35□□□□□ -0.43
MRRF-208ENST00000394315 COLQQ9Y215 455 aaPredicted RBP12.34□□□□□ -0.43
MRRF-208ENST00000394315 OTUD5Q96G74 571 aa12.32□□□□□ -0.44
MRRF-208ENST00000394315 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
MRRF-208ENST00000394315 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
MRRF-208ENST00000394315 MAMSTRQ6ZN01 415 aa12.3□□□□□ -0.44
MRRF-208ENST00000394315 PLCG2P16885 1265 aa12.28□□□□□ -0.44
MRRF-208ENST00000394315 IRX5P78411 483 aaPredicted RBP12.27□□□□□ -0.44
MRRF-208ENST00000394315 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.44
MRRF-208ENST00000394315 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
MRRF-208ENST00000394315 OCEL1Q9H607 264 aa12.27□□□□□ -0.45
MRRF-208ENST00000394315 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
MRRF-208ENST00000394315 SCUBE2Q9NQ36 999 aa12.23□□□□□ -0.45
MRRF-208ENST00000394315 ECM2O94769 699 aaPredicted RBP12.22□□□□□ -0.45
MRRF-208ENST00000394315 CABP2Q9NPB3 220 aa12.21□□□□□ -0.45
MRRF-208ENST00000394315 PKD2Q13563 968 aa12.21□□□□□ -0.46
MRRF-208ENST00000394315 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
MRRF-208ENST00000394315 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
MRRF-208ENST00000394315 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.469e-7■■■■□ 20.4
MRRF-208ENST00000394315 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
MRRF-208ENST00000394315 RTN4Q9NQC3 1192 aaKnown RBP12.16□□□□□ -0.46
MRRF-208ENST00000394315 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.15□□□□□ -0.46
MRRF-208ENST00000394315 ZFP91Q96JP5 570 aaPredicted RBP12.15□□□□□ -0.46
MRRF-208ENST00000394315 PDCD7Q8N8D1 485 aaKnown RBP12.14□□□□□ -0.47
MRRF-208ENST00000394315 ILDR1Q86SU0 546 aaPredicted RBP12.11□□□□□ -0.47
MRRF-208ENST00000394315 EFCAB3Q8N7B9 438 aa12.11□□□□□ -0.47
MRRF-208ENST00000394315 RGL2O15211 777 aa12.09□□□□□ -0.47
MRRF-208ENST00000394315 L3MBTL3Q96JM7 780 aaPredicted RBP12.09□□□□□ -0.47
MRRF-208ENST00000394315 SOX12O15370 315 aa12.05□□□□□ -0.48
MRRF-208ENST00000394315 BCL11BQ9C0K0 894 aaPredicted RBP12.05□□□□□ -0.48
MRRF-208ENST00000394315 DPY19L2Q6NUT2 758 aa12.04□□□□□ -0.48
MRRF-208ENST00000394315 SLAIN1Q8ND83 568 aa12.04□□□□□ -0.48
MRRF-208ENST00000394315 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.03□□□□□ -0.48
MRRF-208ENST00000394315 STK24Q9Y6E0 443 aa12.03□□□□□ -0.48
MRRF-208ENST00000394315 STK25O00506 426 aa12.02□□□□□ -0.48
MRRF-208ENST00000394315 C3orf67Q6ZVT6 689 aa12□□□□□ -0.49
MRRF-208ENST00000394315 G3V3G9 751 aa11.99□□□□□ -0.49
MRRF-208ENST00000394315 BOLA1Q9Y3E2 137 aa11.98□□□□□ -0.49
MRRF-208ENST00000394315 FAM163AQ96GL9 167 aaPredicted RBP11.96□□□□□ -0.5
MRRF-208ENST00000394315 PHF8Q9UPP1 1060 aa11.96□□□□□ -0.5
MRRF-208ENST00000394315 NLRP6P59044 892 aa11.93□□□□□ -0.5
MRRF-208ENST00000394315 MS4A4AQ96JQ5 239 aa11.91□□□□□ -0.5
MRRF-208ENST00000394315 TMEM121BQ9BXQ6 578 aaPredicted RBP11.91□□□□□ -0.5
MRRF-208ENST00000394315 FBXO22Q8NEZ5 403 aa11.88□□□□□ -0.51
MRRF-208ENST00000394315 SNPHO15079 494 aa11.87□□□□□ -0.51
MRRF-208ENST00000394315 MFRPQ9BY79 579 aa11.87□□□□□ -0.51
MRRF-208ENST00000394315 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
MRRF-208ENST00000394315 HS6ST3Q8IZP7 471 aa11.85□□□□□ -0.51
MRRF-208ENST00000394315 POTEMA6NI47 508 aa11.84□□□□□ -0.51
MRRF-208ENST00000394315 CHGAP10645 457 aaKnown RBP11.84□□□□□ -0.51
MRRF-208ENST00000394315 LCE2DQ5TA82 110 aaPredicted RBP11.84□□□□□ -0.51
MRRF-208ENST00000394315 POTEGQ6S5H5 508 aa11.83□□□□□ -0.52
MRRF-208ENST00000394315 ST18O60284 1047 aa11.8□□□□□ -0.52
MRRF-208ENST00000394315 DCAF8L2P0C7V8 631 aa11.75□□□□□ -0.53
MRRF-208ENST00000394315 TMEM92Q6UXU6 159 aa11.72□□□□□ -0.53
MRRF-208ENST00000394315 DNAJC5Q9H3Z4 198 aa11.72□□□□□ -0.53
MRRF-208ENST00000394315 PPP1R37O75864 691 aa11.69□□□□□ -0.54
MRRF-208ENST00000394315 PCDH10Q9P2E7 1040 aa11.69□□□□□ -0.54
MRRF-208ENST00000394315 HOXB3P14651 431 aaPredicted RBP11.67□□□□□ -0.54
MRRF-208ENST00000394315 NKX1-1Q15270 411 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms