RNA–Protein interactions for RNA: ENST00000392632.6

UBR3-202, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-202ENST00000392632 LOC105371045A0A1W2PR82 267 aa5.24□□□□□ -1.57
UBR3-202ENST00000392632 PLEKHD1A6NEE1 506 aa5.24□□□□□ -1.57
UBR3-202ENST00000392632 L1TD1Q5T7N2 865 aaKnown RBP5.24□□□□□ -1.57
UBR3-202ENST00000392632 CASC1Q6TDU7 716 aa5.24□□□□□ -1.57
UBR3-202ENST00000392632 NRDCO43847 1150 aa5.24□□□□□ -1.57
UBR3-202ENST00000392632 TRHP20396 242 aaPredicted RBP5.24□□□□□ -1.57
UBR3-202ENST00000392632 LMOD2Q6P5Q4 547 aa5.24□□□□□ -1.57
UBR3-202ENST00000392632 CHMP4AQ9BY43 222 aa5.24□□□□□ -1.57
UBR3-202ENST00000392632 NUDCQ9Y266 331 aa5.23□□□□□ -1.57
UBR3-202ENST00000392632 DCAF8L1A6NGE4 600 aa5.22□□□□□ -1.57
UBR3-202ENST00000392632 PNNQ9H307 717 aaKnown RBP5.22□□□□□ -1.57
UBR3-202ENST00000392632 TRIM44Q96DX7 344 aaPredicted RBP5.21□□□□□ -1.57
UBR3-202ENST00000392632 PLEKHG5O94827 1062 aa5.21□□□□□ -1.58
UBR3-202ENST00000392632 TULP1O00294 542 aaPredicted RBP5.21□□□□□ -1.58
UBR3-202ENST00000392632 BECN1Q14457 450 aa5.21□□□□□ -1.58
UBR3-202ENST00000392632 GOLGA6L6A8MZA4 724 aa5.21□□□□□ -1.58
UBR3-202ENST00000392632 SENP3Q9H4L4 574 aaPredicted RBP5.21□□□□□ -1.58
UBR3-202ENST00000392632 MS4A1P11836 297 aa5.2□□□□□ -1.58
UBR3-202ENST00000392632 FGD1P98174 961 aa5.2□□□□□ -1.58
UBR3-202ENST00000392632 KRI1Q8N9T8 703 aaKnown RBP5.2□□□□□ -1.58
UBR3-202ENST00000392632 POGKQ9P215 609 aa5.2□□□□□ -1.58
UBR3-202ENST00000392632 MTUS2Q5JR59 1369 aa5.19□□□□□ -1.58
UBR3-202ENST00000392632 MAPK8IP3Q9UPT6 1336 aa5.19□□□□□ -1.58
UBR3-202ENST00000392632 CCDC136Q96JN2 1154 aa5.19□□□□□ -1.58
UBR3-202ENST00000392632 KCNH8Q96L42 1107 aa5.19□□□□□ -1.58
UBR3-202ENST00000392632 CLSTN1O94985 981 aa5.18□□□□□ -1.58
UBR3-202ENST00000392632 CHAF1AQ13111 956 aaPredicted RBP5.18□□□□□ -1.58
UBR3-202ENST00000392632 CFAP44Q96MT7 982 aa5.18□□□□□ -1.58
UBR3-202ENST00000392632 KDM2AQ9Y2K7 1162 aa5.18□□□□□ -1.58
UBR3-202ENST00000392632 HNRNPUQ00839 825 aaKnown RBP eCLIP5.17□□□□□ -1.58
UBR3-202ENST00000392632 ANO8Q9HCE9 1232 aaPredicted RBP5.17□□□□□ -1.58
UBR3-202ENST00000392632 TNNT2P45379 298 aaPredicted RBP5.17□□□□□ -1.58
UBR3-202ENST00000392632 OS9Q13438 667 aaPredicted RBP5.17□□□□□ -1.58
UBR3-202ENST00000392632 HDAC5Q9UQL6 1122 aa5.17□□□□□ -1.58
UBR3-202ENST00000392632 ISY1Q9ULR0 285 aaKnown RBP5.17□□□□□ -1.58
UBR3-202ENST00000392632 KCNJ4P48050 445 aa5.16□□□□□ -1.58
UBR3-202ENST00000392632 FAM9BQ8IZU0 186 aa5.16□□□□□ -1.58
UBR3-202ENST00000392632 KNSTRNQ9Y448 316 aa5.16□□□□□ -1.58
UBR3-202ENST00000392632 NCBP3Q53F19 620 aaKnown RBP5.16□□□□□ -1.58
UBR3-202ENST00000392632 RSF1Q96T23 1441 aaPredicted RBP5.16□□□□□ -1.58
UBR3-202ENST00000392632 CCDC34Q96HJ3 373 aa5.15□□□□□ -1.58
UBR3-202ENST00000392632 FOXD1Q16676 465 aa5.15□□□□□ -1.58
UBR3-202ENST00000392632 DDRGK1Q96HY6 314 aa5.15□□□□□ -1.58
UBR3-202ENST00000392632 PPM1GO15355 546 aaPredicted RBP5.15□□□□□ -1.59
UBR3-202ENST00000392632 PTMAP06454 111 aaKnown RBP5.15□□□□□ -1.59
UBR3-202ENST00000392632 FTSJ3Q8IY81 847 aaKnown RBP5.15□□□□□ -1.59
UBR3-202ENST00000392632 CHIC2Q9UKJ5 165 aa5.15□□□□□ -1.59
UBR3-202ENST00000392632 KIAA2012Q0VF49 1180 aa5.15□□□□□ -1.59
UBR3-202ENST00000392632 MRS2Q9HD23 443 aa5.15□□□□□ -1.59
UBR3-202ENST00000392632 SALL2Q9Y467 1007 aaPredicted RBP5.15□□□□□ -1.59
UBR3-202ENST00000392632 G3V3G9 751 aa5.14□□□□□ -1.59
UBR3-202ENST00000392632 DCAF8Q5TAQ9 597 aa5.14□□□□□ -1.59
UBR3-202ENST00000392632 PRM3Q9NNZ6 103 aa5.14□□□□□ -1.59
UBR3-202ENST00000392632 KANK1Q14678 1352 aa5.14□□□□□ -1.59
UBR3-202ENST00000392632 GOLGA6L4A6NEF3 574 aa5.14□□□□□ -1.59
UBR3-202ENST00000392632 CFDP1Q9UEE9 299 aaPredicted RBP5.13□□□□□ -1.59
UBR3-202ENST00000392632 CCDC9Q9Y3X0 531 aaKnown RBP5.13□□□□□ -1.59
UBR3-202ENST00000392632 CSB-PGBD3P0DP91 1061 aa5.12□□□□□ -1.59
UBR3-202ENST00000392632 MCCP23508 829 aa5.12□□□□□ -1.59
UBR3-202ENST00000392632 RTF1Q92541 710 aaKnown RBP5.12□□□□□ -1.59
UBR3-202ENST00000392632 NAP1L2Q9ULW6 460 aaPredicted RBP5.11□□□□□ -1.59
UBR3-202ENST00000392632 HTATSF1O43719 755 aaKnown RBP5.11□□□□□ -1.59
UBR3-202ENST00000392632 CALD1Q05682 793 aaKnown RBP5.1□□□□□ -1.59
UBR3-202ENST00000392632 GNL2Q13823 731 aaKnown RBP5.1□□□□□ -1.59
UBR3-202ENST00000392632 DNTTIP2Q5QJE6 756 aaKnown RBP5.1□□□□□ -1.59
UBR3-202ENST00000392632 FKBP8Q14318 412 aa5.1□□□□□ -1.59
UBR3-202ENST00000392632 RGL3Q3MIN7 710 aa5.1□□□□□ -1.59
UBR3-202ENST00000392632 CEP89Q96ST8 783 aa5.1□□□□□ -1.59
UBR3-202ENST00000392632 USP35Q9P2H5 1018 aa5.1□□□□□ -1.59
UBR3-202ENST00000392632 DDX10Q13206 875 aaKnown RBP5.1□□□□□ -1.59
UBR3-202ENST00000392632 GTF2E1P29083 439 aaPredicted RBP5.09□□□□□ -1.59
UBR3-202ENST00000392632 LAS1LQ9Y4W2 734 aaKnown RBP5.09□□□□□ -1.59
UBR3-202ENST00000392632 EID1Q9Y6B2 187 aa5.09□□□□□ -1.59
UBR3-202ENST00000392632 GTF3C3Q9Y5Q9 886 aa5.09□□□□□ -1.6
UBR3-202ENST00000392632 HDGFL2Q7Z4V5 671 aaPredicted RBP5.08□□□□□ -1.6
UBR3-202ENST00000392632 ERCC6Q03468 1493 aa5.08□□□□□ -1.6
UBR3-202ENST00000392632 KIAA1211Q6ZU35 1233 aa5.08□□□□□ -1.6
UBR3-202ENST00000392632 CHMP4CQ96CF2 233 aa5.08□□□□□ -1.6
UBR3-202ENST00000392632 WASHC2AQ641Q2 1341 aa5.08□□□□□ -1.6
UBR3-202ENST00000392632 GORABQ5T7V8 394 aa5.08□□□□□ -1.6
UBR3-202ENST00000392632 MLECQ14165 292 aa5.08□□□□□ -1.6
UBR3-202ENST00000392632 TAF7LQ5H9L4 462 aa5.08□□□□□ -1.6
UBR3-202ENST00000392632 U2SURPO15042 1029 aaKnown RBP5.07□□□□□ -1.6
UBR3-202ENST00000392632 SRPK2P78362 688 aaKnown RBP5.07□□□□□ -1.6
UBR3-202ENST00000392632 CARD11Q9BXL7 1154 aa5.07□□□□□ -1.6
UBR3-202ENST00000392632 IPO8O15397 1037 aaKnown RBP5.06□□□□□ -1.6
UBR3-202ENST00000392632 NOC3LQ8WTT2 800 aaKnown RBP5.06□□□□□ -1.6
UBR3-202ENST00000392632 HMGB2P26583 209 aaKnown RBP5.06□□□□□ -1.6
UBR3-202ENST00000392632 CNKSR2Q8WXI2 1034 aa5.06□□□□□ -1.6
UBR3-202ENST00000392632 CTDP1Q9Y5B0 961 aaPredicted RBP5.06□□□□□ -1.6
UBR3-202ENST00000392632 PHF23Q9BUL5 403 aaPredicted RBP5.06□□□□□ -1.6
UBR3-202ENST00000392632 KIF3AQ9Y496 699 aa5.06□□□□□ -1.6
UBR3-202ENST00000392632 TMF1P82094 1093 aa5.05□□□□□ -1.6
UBR3-202ENST00000392632 PLCB2Q00722 1185 aa5.05□□□□□ -1.6
UBR3-202ENST00000392632 ERICH6BQ5W0A0 696 aa5.05□□□□□ -1.6
UBR3-202ENST00000392632 GPATCH3Q96I76 525 aa5.05□□□□□ -1.6
UBR3-202ENST00000392632 MARCH6O60337 910 aa5.05□□□□□ -1.6
UBR3-202ENST00000392632 FRAT2O75474 233 aaPredicted RBP5.05□□□□□ -1.6
UBR3-202ENST00000392632 RRP7BPQ9NSQ0 103 aa5.05□□□□□ -1.6
UBR3-202ENST00000392632 TAOK2Q9UL54 1235 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms