RNA–Protein interactions for RNA: ENST00000392521.6

CIT-203, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CIT, Length 8,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-203ENST00000392521 BECN1Q14457 450 aa15.72■□□□□ 0.11
CIT-203ENST00000392521 PTMAP06454 111 aaKnown RBP15.72■□□□□ 0.11
CIT-203ENST00000392521 KDM2AQ9Y2K7 1162 aa15.72■□□□□ 0.11
CIT-203ENST00000392521 GOLGA6L22H0YM25 854 aa15.71■□□□□ 0.11
CIT-203ENST00000392521 DDX10Q13206 875 aaKnown RBP15.7■□□□□ 0.1
CIT-203ENST00000392521 TAOK2Q9UL54 1235 aa15.7■□□□□ 0.1
CIT-203ENST00000392521 CASC1Q6TDU7 716 aa15.68■□□□□ 0.1
CIT-203ENST00000392521 ANP32EQ9BTT0 268 aa15.63■□□□□ 0.09
CIT-203ENST00000392521 DDRGK1Q96HY6 314 aa15.63■□□□□ 0.09
CIT-203ENST00000392521 PPP1R15AO75807 674 aaPredicted RBP15.62■□□□□ 0.09
CIT-203ENST00000392521 CLSTN1O94985 981 aa15.6■□□□□ 0.09
CIT-203ENST00000392521 IRX6P78412 446 aaPredicted RBP15.59■□□□□ 0.09
CIT-203ENST00000392521 CHIC2Q9UKJ5 165 aa15.59■□□□□ 0.09
CIT-203ENST00000392521 MRS2Q9HD23 443 aa15.58■□□□□ 0.09
CIT-203ENST00000392521 PLCB2Q00722 1185 aa15.56■□□□□ 0.08
CIT-203ENST00000392521 GOLGA2Q08379 1002 aa15.56■□□□□ 0.08
CIT-203ENST00000392521 PPM1GO15355 546 aaPredicted RBP15.56■□□□□ 0.08
CIT-203ENST00000392521 GOLGA6L6A8MZA4 724 aa15.56■□□□□ 0.08
CIT-203ENST00000392521 FTSJ3Q8IY81 847 aaKnown RBP15.55■□□□□ 0.08
CIT-203ENST00000392521 NAP1L2Q9ULW6 460 aaPredicted RBP15.54■□□□□ 0.08
CIT-203ENST00000392521 TSPY4P0CV99 314 aa15.53■□□□□ 0.08
CIT-203ENST00000392521 TSPY10P0CW01 314 aa15.53■□□□□ 0.08
CIT-203ENST00000392521 FGD1P98174 961 aa15.53■□□□□ 0.08
CIT-203ENST00000392521 LAS1LQ9Y4W2 734 aaKnown RBP15.53■□□□□ 0.08
CIT-203ENST00000392521 ARID4BQ4LE39 1312 aaPredicted RBP15.52■□□□□ 0.07
CIT-203ENST00000392521 LMOD2Q6P5Q4 547 aa15.49■□□□□ 0.07
CIT-203ENST00000392521 OS9Q13438 667 aaPredicted RBP15.47■□□□□ 0.07
CIT-203ENST00000392521 NAP1L5Q96NT1 182 aaPredicted RBP15.47■□□□□ 0.07
CIT-203ENST00000392521 KCNJ4P48050 445 aa15.46■□□□□ 0.07
CIT-203ENST00000392521 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
CIT-203ENST00000392521 NRDCO43847 1150 aa15.46■□□□□ 0.06
CIT-203ENST00000392521 PRM3Q9NNZ6 103 aa15.44■□□□□ 0.06
CIT-203ENST00000392521 CSRNP3Q8WYN3 585 aa15.44■□□□□ 0.06
CIT-203ENST00000392521 ISY1Q9ULR0 285 aaKnown RBP15.44■□□□□ 0.06
CIT-203ENST00000392521 HSP90AB1P08238 724 aaKnown RBP15.42■□□□□ 0.06
CIT-203ENST00000392521 HIRIP3Q9BW71 556 aaPredicted RBP15.41■□□□□ 0.06
CIT-203ENST00000392521 CHAF1AQ13111 956 aaPredicted RBP15.38■□□□□ 0.05
CIT-203ENST00000392521 AMER1Q5JTC6 1135 aaPredicted RBP15.38■□□□□ 0.05
CIT-203ENST00000392521 GOLGA6L4A6NEF3 574 aa15.37■□□□□ 0.05
CIT-203ENST00000392521 DRC7Q8IY82 874 aa15.37■□□□□ 0.05
CIT-203ENST00000392521 KNSTRNQ9Y448 316 aa15.36■□□□□ 0.05
CIT-203ENST00000392521 EIF4G2P78344 907 aaKnown RBP eCLIP15.36■□□□□ 0.05
CIT-203ENST00000392521 KIAA2012Q0VF49 1180 aa15.36■□□□□ 0.05
CIT-203ENST00000392521 KCNH8Q96L42 1107 aa15.36■□□□□ 0.05
CIT-203ENST00000392521 ERICH6BQ5W0A0 696 aa15.36■□□□□ 0.05
CIT-203ENST00000392521 MAPK8IP3Q9UPT6 1336 aa15.36■□□□□ 0.05
CIT-203ENST00000392521 MTUS2Q5JR59 1369 aa15.36■□□□□ 0.05
CIT-203ENST00000392521 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
CIT-203ENST00000392521 L1TD1Q5T7N2 865 aaKnown RBP15.36■□□□□ 0.05
CIT-203ENST00000392521 SENP3-EIF4A1A0A087X0R7 540 aa15.35■□□□□ 0.05
CIT-203ENST00000392521 NEUROD2Q15784 382 aa15.35■□□□□ 0.05
CIT-203ENST00000392521 CHMP7Q8WUX9 453 aaPredicted RBP15.35■□□□□ 0.05
CIT-203ENST00000392521 NOC3LQ8WTT2 800 aaKnown RBP15.35■□□□□ 0.05
CIT-203ENST00000392521 GNL2Q13823 731 aaKnown RBP15.32■□□□□ 0.04
CIT-203ENST00000392521 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
CIT-203ENST00000392521 CDCA8Q53HL2 280 aa15.31■□□□□ 0.04
CIT-203ENST00000392521 PNNQ9H307 717 aaKnown RBP15.3■□□□□ 0.04
CIT-203ENST00000392521 RTN4Q9NQC3 1192 aaKnown RBP15.3■□□□□ 0.04
CIT-203ENST00000392521 FRAT1Q92837 279 aaPredicted RBP15.29■□□□□ 0.04
CIT-203ENST00000392521 POGKQ9P215 609 aa15.28■□□□□ 0.04
CIT-203ENST00000392521 RRP7BPQ9NSQ0 103 aa15.28■□□□□ 0.04
CIT-203ENST00000392521 NUDCQ9Y266 331 aa15.28■□□□□ 0.04
CIT-203ENST00000392521 CHMP4BQ9H444 224 aaKnown RBP15.28■□□□□ 0.04
CIT-203ENST00000392521 MSNP26038 577 aaKnown RBP15.27■□□□□ 0.04
CIT-203ENST00000392521 RGS3P49796 1198 aa15.26■□□□□ 0.03
CIT-203ENST00000392521 MCCP23508 829 aa15.24■□□□□ 0.03
CIT-203ENST00000392521 U2SURPO15042 1029 aaKnown RBP15.23■□□□□ 0.03
CIT-203ENST00000392521 HSCBQ8IWL3 235 aa15.22■□□□□ 0.03
CIT-203ENST00000392521 TMX4Q9H1E5 349 aaPredicted RBP15.21■□□□□ 0.03
CIT-203ENST00000392521 SUPT16HQ9Y5B9 1047 aaKnown RBP15.2■□□□□ 0.02
CIT-203ENST00000392521 SOX12O15370 315 aa15.2■□□□□ 0.02
CIT-203ENST00000392521 MS4A1P11836 297 aa15.19■□□□□ 0.02
CIT-203ENST00000392521 A0A0U1RQG5 324 aaPredicted RBP15.19■□□□□ 0.02
CIT-203ENST00000392521 PDE4CQ08493 712 aa15.19■□□□□ 0.02
CIT-203ENST00000392521 MIER1Q8N108 512 aa15.18■□□□□ 0.02
CIT-203ENST00000392521 SPRYD3Q8NCJ5 442 aa15.17■□□□□ 0.02
CIT-203ENST00000392521 CARD11Q9BXL7 1154 aa15.15■□□□□ 0.02
CIT-203ENST00000392521 CC2D1BQ5T0F9 858 aaKnown RBP15.15■□□□□ 0.02
CIT-203ENST00000392521 KIAA1211Q6ZU35 1233 aa15.15■□□□□ 0.02
CIT-203ENST00000392521 PLEKHD1A6NEE1 506 aa15.14■□□□□ 0.01
CIT-203ENST00000392521 RTF1Q92541 710 aaKnown RBP15.13■□□□□ 0.01
CIT-203ENST00000392521 KRI1Q8N9T8 703 aaKnown RBP15.12■□□□□ 0.01
CIT-203ENST00000392521 G3V3G9 751 aa15.11■□□□□ 0.01
CIT-203ENST00000392521 DCAF8Q5TAQ9 597 aa15.11■□□□□ 0.01
CIT-203ENST00000392521 NOP58Q9Y2X3 529 aaKnown RBP15.11■□□□□ 0.01
CIT-203ENST00000392521 ZNF330Q9Y3S2 320 aaPredicted RBP15.1■□□□□ 0.01
CIT-203ENST00000392521 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
CIT-203ENST00000392521 TRHP20396 242 aaPredicted RBP15.1■□□□□ 0.01
CIT-203ENST00000392521 ANO8Q9HCE9 1232 aaPredicted RBP15.09■□□□□ 0.01
CIT-203ENST00000392521 GOLGA6L1Q8N7Z2 621 aa15.09■□□□□ 0.01
CIT-203ENST00000392521 CFAP44Q96MT7 982 aa15.08■□□□□ 0
CIT-203ENST00000392521 TPM4P67936 248 aa15.08■□□□□ 0
CIT-203ENST00000392521 ARID3AQ99856 593 aa15.07■□□□□ 0
CIT-203ENST00000392521 APBB1O00213 710 aa15.07■□□□□ 0
CIT-203ENST00000392521 CREBRFQ8IUR6 639 aa15.07■□□□□ 0
CIT-203ENST00000392521 TNNT3P45378 269 aaPredicted RBP15.06■□□□□ 0
CIT-203ENST00000392521 SRPK2P78362 688 aaKnown RBP15.06■□□□□ 0
CIT-203ENST00000392521 CEP89Q96ST8 783 aa15.06■□□□□ 0
CIT-203ENST00000392521 PAK3O75914 559 aaPredicted RBP15.05■□□□□ -0
CIT-203ENST00000392521 HSP90B1P14625 803 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms