RNA–Protein interactions for RNA: ENST00000391297.1

RNU6-279P-201, Transcript of RNA, U6 small nuclear 279, pseudogene, humanhuman

BASIC

Gene RNU6-279P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-279P-201ENST00000391297 MS4A3Q96HJ5 214 aa6.34□□□□□ -1.39
RNU6-279P-201ENST00000391297 ATN1P54259 1190 aaPredicted RBP6.33□□□□□ -1.4
RNU6-279P-201ENST00000391297 MARVELD3Q96A59 401 aa6.33□□□□□ -1.4
RNU6-279P-201ENST00000391297 PAK3O75914 559 aaPredicted RBP6.31□□□□□ -1.4
RNU6-279P-201ENST00000391297 SLAIN1Q8ND83 568 aa6.31□□□□□ -1.4
RNU6-279P-201ENST00000391297 KRTAP3-3Q9BYR6 98 aa6.3□□□□□ -1.4
RNU6-279P-201ENST00000391297 KRTAP3-2Q9BYR7 98 aa6.3□□□□□ -1.4
RNU6-279P-201ENST00000391297 TMEM121BQ9BXQ6 578 aaPredicted RBP6.28□□□□□ -1.4
RNU6-279P-201ENST00000391297 MKRN4PQ13434 485 aaPredicted RBP6.24□□□□□ -1.41
RNU6-279P-201ENST00000391297 COLQQ9Y215 455 aaPredicted RBP6.24□□□□□ -1.41
RNU6-279P-201ENST00000391297 RNF166Q96A37 237 aaPredicted RBP6.21□□□□□ -1.42
RNU6-279P-201ENST00000391297 CREBZFQ9NS37 354 aa6.21□□□□□ -1.42
RNU6-279P-201ENST00000391297 SEC24BO95487 1268 aa6.2□□□□□ -1.42
RNU6-279P-201ENST00000391297 POTEB3A0JP26 581 aa6.19□□□□□ -1.42
RNU6-279P-201ENST00000391297 POTEBQ6S5H4 581 aa6.19□□□□□ -1.42
RNU6-279P-201ENST00000391297 EMP3P54852 163 aa6.16□□□□□ -1.42
RNU6-279P-201ENST00000391297 HS3ST6Q96QI5 342 aa6.16□□□□□ -1.42
RNU6-279P-201ENST00000391297 BMP2KQ9NSY1 1161 aaPredicted RBP6.16□□□□□ -1.42
RNU6-279P-201ENST00000391297 KCNA4P22459 653 aa6.15□□□□□ -1.42
RNU6-279P-201ENST00000391297 FAM205CA6NFA0 338 aa6.12□□□□□ -1.43
RNU6-279P-201ENST00000391297 TRPC6Q9Y210 931 aa6.12□□□□□ -1.43
RNU6-279P-201ENST00000391297 SNPHO15079 494 aa6.09□□□□□ -1.43
RNU6-279P-201ENST00000391297 MYT1LQ9UL68 1186 aa6.06□□□□□ -1.44
RNU6-279P-201ENST00000391297 NPM1P06748 294 aaKnown RBP eCLIP6.02□□□□□ -1.45
RNU6-279P-201ENST00000391297 TIE1P35590 1138 aa6.02□□□□□ -1.45
RNU6-279P-201ENST00000391297 TTLL13PA6NNM8 815 aa6.01□□□□□ -1.45
RNU6-279P-201ENST00000391297 FOXD4L1Q9NU39 408 aa6.01□□□□□ -1.45
RNU6-279P-201ENST00000391297 IER5LQ5T953 404 aa5.98□□□□□ -1.45
RNU6-279P-201ENST00000391297 TRIM35Q9UPQ4 493 aa5.98□□□□□ -1.45
RNU6-279P-201ENST00000391297 KIF12Q96FN5 646 aa5.97□□□□□ -1.45
RNU6-279P-201ENST00000391297 TSPYL2Q9H2G4 693 aaPredicted RBP5.97□□□□□ -1.45
RNU6-279P-201ENST00000391297 MNX1P50219 401 aaPredicted RBP5.96□□□□□ -1.46
RNU6-279P-201ENST00000391297 PLA2G2EQ9NZK7 142 aa5.96□□□□□ -1.46
RNU6-279P-201ENST00000391297 CCDC61Q9Y6R9 512 aa5.94□□□□□ -1.46
RNU6-279P-201ENST00000391297 PLCG2P16885 1265 aa5.93□□□□□ -1.46
RNU6-279P-201ENST00000391297 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.93□□□□□ -1.46
RNU6-279P-201ENST00000391297 MAP3K13O43283 966 aa5.9□□□□□ -1.46
RNU6-279P-201ENST00000391297 IRX2Q9BZI1 471 aaPredicted RBP5.86□□□□□ -1.47
RNU6-279P-201ENST00000391297 STAG3Q9UJ98 1225 aa5.86□□□□□ -1.47
RNU6-279P-201ENST00000391297 ATXN8OSP0DMR3 200 aa5.85□□□□□ -1.47
RNU6-279P-201ENST00000391297 IRX5P78411 483 aaPredicted RBP5.83□□□□□ -1.48
RNU6-279P-201ENST00000391297 ERBB3P21860 1342 aa5.81□□□□□ -1.48
RNU6-279P-201ENST00000391297 PTGER2P43116 358 aa5.8□□□□□ -1.48
RNU6-279P-201ENST00000391297 VARS2Q5ST30 1063 aaKnown RBP5.76□□□□□ -1.49
RNU6-279P-201ENST00000391297 OCEL1Q9H607 264 aa5.76□□□□□ -1.49
RNU6-279P-201ENST00000391297 C3orf67Q6ZVT6 689 aa5.75□□□□□ -1.49
RNU6-279P-201ENST00000391297 ANKRD13DQ6ZTN6 518 aa5.73□□□□□ -1.49
RNU6-279P-201ENST00000391297 TMEM106CQ9BVX2 250 aa5.73□□□□□ -1.49
RNU6-279P-201ENST00000391297 HOXB1P14653 301 aaPredicted RBP5.72□□□□□ -1.49
RNU6-279P-201ENST00000391297 LOC100996750A0A140TA64 210 aa5.7□□□□□ -1.5
RNU6-279P-201ENST00000391297 Q6ZNB5 142 aa5.7□□□□□ -1.5
RNU6-279P-201ENST00000391297 KRTAP4-6Q9BYQ5 205 aa5.7□□□□□ -1.5
RNU6-279P-201ENST00000391297 PCDHB13Q9Y5F0 798 aa5.7□□□□□ -1.5
RNU6-279P-201ENST00000391297 HOXB3P14651 431 aaPredicted RBP5.69□□□□□ -1.5
RNU6-279P-201ENST00000391297 HCSTQ9UBK5 93 aa5.69□□□□□ -1.5
RNU6-279P-201ENST00000391297 ZNF687Q8N1G0 1237 aa5.68□□□□□ -1.5
RNU6-279P-201ENST00000391297 ZNF710Q8N1W2 664 aa5.67□□□□□ -1.5
RNU6-279P-201ENST00000391297 ZBTB22O15209 634 aa5.65□□□□□ -1.5
RNU6-279P-201ENST00000391297 IFNL1Q8IU54 200 aa5.64□□□□□ -1.51
RNU6-279P-201ENST00000391297 SGIP1Q9BQI5 828 aa5.63□□□□□ -1.51
RNU6-279P-201ENST00000391297 RGS20O76081 388 aa5.62□□□□□ -1.51
RNU6-279P-201ENST00000391297 RASEFQ8IZ41 740 aa5.62□□□□□ -1.51
RNU6-279P-201ENST00000391297 PDCD7Q8N8D1 485 aaKnown RBP5.59□□□□□ -1.51
RNU6-279P-201ENST00000391297 LSM11P83369 360 aaKnown RBP eCLIP5.58□□□□□ -1.52
RNU6-279P-201ENST00000391297 L3MBTL3Q96JM7 780 aaPredicted RBP5.57□□□□□ -1.52
RNU6-279P-201ENST00000391297 SLC4A1APQ9BWU0 796 aaKnown RBP5.57□□□□□ -1.52
RNU6-279P-201ENST00000391297 LCE2BO14633 110 aa5.56□□□□□ -1.52
RNU6-279P-201ENST00000391297 DOK7Q18PE1 504 aa5.55□□□□□ -1.52
RNU6-279P-201ENST00000391297 RIMBP2O15034 1052 aa5.49□□□□□ -1.53
RNU6-279P-201ENST00000391297 ZNF775Q96BV0 537 aaPredicted RBP5.49□□□□□ -1.53
RNU6-279P-201ENST00000391297 A0A0G2JS52 829 aa5.48□□□□□ -1.53
RNU6-279P-201ENST00000391297 TRAF7Q6Q0C0 670 aa5.47□□□□□ -1.53
RNU6-279P-201ENST00000391297 ZNF787Q6DD87 383 aa5.42□□□□□ -1.54
RNU6-279P-201ENST00000391297 GPR153Q6NV75 609 aa5.42□□□□□ -1.54
RNU6-279P-201ENST00000391297 AXIN2Q9Y2T1 843 aa5.42□□□□□ -1.54
RNU6-279P-201ENST00000391297 IFFO2Q5TF58 517 aa5.41□□□□□ -1.54
RNU6-279P-201ENST00000391297 DPY19L2Q6NUT2 758 aa5.41□□□□□ -1.54
RNU6-279P-201ENST00000391297 POTEEQ6S8J3 1075 aa5.41□□□□□ -1.54
RNU6-279P-201ENST00000391297 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.41□□□□□ -1.54
RNU6-279P-201ENST00000391297 SPDYE4A6NLX3 237 aa5.4□□□□□ -1.54
RNU6-279P-201ENST00000391297 KCTD12Q96CX2 325 aaKnown RBP5.4□□□□□ -1.54
RNU6-279P-201ENST00000391297 ZSWIM6Q9HCJ5 1215 aa5.4□□□□□ -1.54
RNU6-279P-201ENST00000391297 MKRN3Q13064 507 aaKnown RBP5.39□□□□□ -1.55
RNU6-279P-201ENST00000391297 ZNF316A6NFI3 1004 aaPredicted RBP5.37□□□□□ -1.55
RNU6-279P-201ENST00000391297 GOLGA2Q08379 1002 aa5.36□□□□□ -1.55
RNU6-279P-201ENST00000391297 ADGRD1Q6QNK2 874 aa5.36□□□□□ -1.55
RNU6-279P-201ENST00000391297 BOLA1Q9Y3E2 137 aa5.36□□□□□ -1.55
RNU6-279P-201ENST00000391297 G3V3G9 751 aa5.35□□□□□ -1.55
RNU6-279P-201ENST00000391297 PTPN5P54829 565 aa5.35□□□□□ -1.55
RNU6-279P-201ENST00000391297 ARSIQ5FYB1 569 aa5.35□□□□□ -1.55
RNU6-279P-201ENST00000391297 DCAF8Q5TAQ9 597 aa5.35□□□□□ -1.55
RNU6-279P-201ENST00000391297 PCDHB8Q9UN66 801 aa5.35□□□□□ -1.55
RNU6-279P-201ENST00000391297 PBX2P40425 430 aa5.34□□□□□ -1.55
RNU6-279P-201ENST00000391297 LAPTM4AQ15012 233 aa5.34□□□□□ -1.55
RNU6-279P-201ENST00000391297 KHSRPQ92945 711 aaKnown RBP eCLIP5.34□□□□□ -1.55
RNU6-279P-201ENST00000391297 GFRA3O60609 400 aa5.32□□□□□ -1.56
RNU6-279P-201ENST00000391297 PLEKHG5O94827 1062 aa5.31□□□□□ -1.56
RNU6-279P-201ENST00000391297 MIER1Q8N108 512 aa5.29□□□□□ -1.56
RNU6-279P-201ENST00000391297 NUBP1P53384 320 aa5.28□□□□□ -1.56
RNU6-279P-201ENST00000391297 ILDR1Q86SU0 546 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 220.4 ms