RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 ATMINO43313 823 aaPredicted RBP7.56□□□□□ -1.2
RNU6-239P-201ENST00000390990 EHMT2Q96KQ7 1210 aa7.56□□□□□ -1.2
RNU6-239P-201ENST00000390990 METRNQ9UJH8 293 aa7.56□□□□□ -1.2
RNU6-239P-201ENST00000390990 C7P10643 843 aa7.53□□□□□ -1.2
RNU6-239P-201ENST00000390990 SLC39A7Q92504 469 aa7.53□□□□□ -1.2
RNU6-239P-201ENST00000390990 TSPYL2Q9H2G4 693 aaPredicted RBP7.51□□□□□ -1.21
RNU6-239P-201ENST00000390990 ATN1P54259 1190 aaPredicted RBP7.5□□□□□ -1.21
RNU6-239P-201ENST00000390990 CCDC61Q9Y6R9 512 aa7.49□□□□□ -1.21
RNU6-239P-201ENST00000390990 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
RNU6-239P-201ENST00000390990 PROM2Q8N271 834 aa7.47□□□□□ -1.21
RNU6-239P-201ENST00000390990 KIF12Q96FN5 646 aa7.47□□□□□ -1.21
RNU6-239P-201ENST00000390990 POTEFA5A3E0 1075 aa7.46□□□□□ -1.22
RNU6-239P-201ENST00000390990 MAMSTRQ6ZN01 415 aa7.46□□□□□ -1.22
RNU6-239P-201ENST00000390990 TRPC6Q9Y210 931 aa7.46□□□□□ -1.22
RNU6-239P-201ENST00000390990 FAM163AQ96GL9 167 aaPredicted RBP7.44□□□□□ -1.22
RNU6-239P-201ENST00000390990 BMP2KQ9NSY1 1161 aaPredicted RBP7.44□□□□□ -1.22
RNU6-239P-201ENST00000390990 PCDH10Q9P2E7 1040 aa7.43□□□□□ -1.22
RNU6-239P-201ENST00000390990 MAP3K13O43283 966 aa7.42□□□□□ -1.22
RNU6-239P-201ENST00000390990 SCUBE2Q9NQ36 999 aa7.41□□□□□ -1.22
RNU6-239P-201ENST00000390990 RASEFQ8IZ41 740 aa7.4□□□□□ -1.22
RNU6-239P-201ENST00000390990 COLQQ9Y215 455 aaPredicted RBP7.38□□□□□ -1.23
RNU6-239P-201ENST00000390990 TIE1P35590 1138 aa7.37□□□□□ -1.23
RNU6-239P-201ENST00000390990 TTLL13PA6NNM8 815 aa7.36□□□□□ -1.23
RNU6-239P-201ENST00000390990 MIER1Q8N108 512 aa7.36□□□□□ -1.23
RNU6-239P-201ENST00000390990 SEC24BO95487 1268 aa7.32□□□□□ -1.24
RNU6-239P-201ENST00000390990 PLEKHG5O94827 1062 aa7.3□□□□□ -1.24
RNU6-239P-201ENST00000390990 TRIM35Q9UPQ4 493 aa7.3□□□□□ -1.24
RNU6-239P-201ENST00000390990 PCDHB13Q9Y5F0 798 aa7.28□□□□□ -1.24
RNU6-239P-201ENST00000390990 NUBP1P53384 320 aa7.27□□□□□ -1.25
RNU6-239P-201ENST00000390990 IER5LQ5T953 404 aa7.27□□□□□ -1.25
RNU6-239P-201ENST00000390990 CDAN1Q8IWY9 1227 aa7.27□□□□□ -1.25
RNU6-239P-201ENST00000390990 SGIP1Q9BQI5 828 aa7.27□□□□□ -1.25
RNU6-239P-201ENST00000390990 IFNL1Q8IU54 200 aa7.26□□□□□ -1.25
RNU6-239P-201ENST00000390990 PLCD3Q8N3E9 789 aa7.26□□□□□ -1.25
RNU6-239P-201ENST00000390990 ST18O60284 1047 aa7.24□□□□□ -1.25
RNU6-239P-201ENST00000390990 SLAIN1Q8ND83 568 aa7.24□□□□□ -1.25
RNU6-239P-201ENST00000390990 TMEM106CQ9BVX2 250 aa7.22□□□□□ -1.25
RNU6-239P-201ENST00000390990 PLCG2P16885 1265 aa7.19□□□□□ -1.26
RNU6-239P-201ENST00000390990 IRX5P78411 483 aaPredicted RBP7.19□□□□□ -1.26
RNU6-239P-201ENST00000390990 ZBTB47Q9UFB7 747 aaPredicted RBP7.18□□□□□ -1.26
RNU6-239P-201ENST00000390990 FAM212AQ96EL1 285 aa7.17□□□□□ -1.26
RNU6-239P-201ENST00000390990 OCEL1Q9H607 264 aa7.14□□□□□ -1.27
RNU6-239P-201ENST00000390990 PYGBP11216 843 aa7.12□□□□□ -1.27
RNU6-239P-201ENST00000390990 PCDHB8Q9UN66 801 aa7.12□□□□□ -1.27
RNU6-239P-201ENST00000390990 MMRN1Q13201 1228 aa7.11□□□□□ -1.27
RNU6-239P-201ENST00000390990 DCAF8Q5TAQ9 597 aa7.11□□□□□ -1.27
RNU6-239P-201ENST00000390990 SPNS2Q8IVW8 549 aa7.11□□□□□ -1.27
RNU6-239P-201ENST00000390990 MARVELD3Q96A59 401 aa7.1□□□□□ -1.27
RNU6-239P-201ENST00000390990 TMEM121BQ9BXQ6 578 aaPredicted RBP7.09□□□□□ -1.27
RNU6-239P-201ENST00000390990 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.08□□□□□ -1.28
RNU6-239P-201ENST00000390990 FKBP8Q14318 412 aa7.07□□□□□ -1.28
RNU6-239P-201ENST00000390990 SNPHO15079 494 aa7.06□□□□□ -1.28
RNU6-239P-201ENST00000390990 PDCD7Q8N8D1 485 aaKnown RBP7.05□□□□□ -1.28
RNU6-239P-201ENST00000390990 POTEB3A0JP26 581 aa7.01□□□□□ -1.29
RNU6-239P-201ENST00000390990 POTEBQ6S5H4 581 aa7.01□□□□□ -1.29
RNU6-239P-201ENST00000390990 EMP3P54852 163 aa6.99□□□□□ -1.29
RNU6-239P-201ENST00000390990 C3orf67Q6ZVT6 689 aa6.99□□□□□ -1.29
RNU6-239P-201ENST00000390990 MKRN3Q13064 507 aaKnown RBP6.98□□□□□ -1.29
RNU6-239P-201ENST00000390990 L3MBTL3Q96JM7 780 aaPredicted RBP6.98□□□□□ -1.29
RNU6-239P-201ENST00000390990 KRTAP3-3Q9BYR6 98 aa6.98□□□□□ -1.29
RNU6-239P-201ENST00000390990 KRTAP3-2Q9BYR7 98 aa6.98□□□□□ -1.29
RNU6-239P-201ENST00000390990 ZNF467Q7Z7K2 595 aaPredicted RBP6.97□□□□□ -1.29
RNU6-239P-201ENST00000390990 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.97□□□□□ -1.29
RNU6-239P-201ENST00000390990 FAM205CA6NFA0 338 aa6.96□□□□□ -1.3
RNU6-239P-201ENST00000390990 GOLGA2Q08379 1002 aa6.96□□□□□ -1.3
RNU6-239P-201ENST00000390990 HS3ST6Q96QI5 342 aa6.96□□□□□ -1.3
RNU6-239P-201ENST00000390990 PSEN1P49768 467 aa6.95□□□□□ -1.3
RNU6-239P-201ENST00000390990 GSE1Q14687 1217 aa6.95□□□□□ -1.3
RNU6-239P-201ENST00000390990 DPY19L2Q6NUT2 758 aa6.95□□□□□ -1.3
RNU6-239P-201ENST00000390990 CHRM1P11229 460 aaPredicted RBP6.94□□□□□ -1.3
RNU6-239P-201ENST00000390990 ILDR1Q86SU0 546 aaPredicted RBP6.94□□□□□ -1.3
RNU6-239P-201ENST00000390990 KLHL34Q8N239 644 aa6.94□□□□□ -1.3
RNU6-239P-201ENST00000390990 FBXO3Q9UK99 471 aa6.94□□□□□ -1.3
RNU6-239P-201ENST00000390990 VASPP50552 380 aaPredicted RBP6.91□□□□□ -1.3
RNU6-239P-201ENST00000390990 HOXB3P14651 431 aaPredicted RBP6.9□□□□□ -1.3
RNU6-239P-201ENST00000390990 PDAP1Q13442 181 aaKnown RBP6.88□□□□□ -1.31
RNU6-239P-201ENST00000390990 CABP2Q9NPB3 220 aa6.87□□□□□ -1.31
RNU6-239P-201ENST00000390990 BOLA1Q9Y3E2 137 aa6.87□□□□□ -1.31
RNU6-239P-201ENST00000390990 HOXB1P14653 301 aaPredicted RBP6.85□□□□□ -1.31
RNU6-239P-201ENST00000390990 G3V3G9 751 aa6.82□□□□□ -1.32
RNU6-239P-201ENST00000390990 ZNF710Q8N1W2 664 aa6.82□□□□□ -1.32
RNU6-239P-201ENST00000390990 CIZ1Q9ULV3 898 aaPredicted RBP6.81□□□□□ -1.32
RNU6-239P-201ENST00000390990 ERBB3P21860 1342 aa6.8□□□□□ -1.32
RNU6-239P-201ENST00000390990 IFNLR1Q8IU57 520 aaPredicted RBP6.8□□□□□ -1.32
RNU6-239P-201ENST00000390990 DOK7Q18PE1 504 aa6.79□□□□□ -1.32
RNU6-239P-201ENST00000390990 SPOCK2Q92563 424 aa6.79□□□□□ -1.32
RNU6-239P-201ENST00000390990 VARS2Q5ST30 1063 aaKnown RBP6.77□□□□□ -1.33
RNU6-239P-201ENST00000390990 TMEM92Q6UXU6 159 aa6.77□□□□□ -1.33
RNU6-239P-201ENST00000390990 EFCAB3Q8N7B9 438 aa6.77□□□□□ -1.33
RNU6-239P-201ENST00000390990 RNF166Q96A37 237 aaPredicted RBP6.77□□□□□ -1.33
RNU6-239P-201ENST00000390990 RIMBP2O15034 1052 aa6.73□□□□□ -1.33
RNU6-239P-201ENST00000390990 GPR153Q6NV75 609 aa6.73□□□□□ -1.33
RNU6-239P-201ENST00000390990 MICALL2Q8IY33 904 aa6.73□□□□□ -1.33
RNU6-239P-201ENST00000390990 MYT1LQ9UL68 1186 aa6.73□□□□□ -1.33
RNU6-239P-201ENST00000390990 ZNF687Q8N1G0 1237 aa6.72□□□□□ -1.33
RNU6-239P-201ENST00000390990 MS4A4AQ96JQ5 239 aa6.7□□□□□ -1.34
RNU6-239P-201ENST00000390990 ZSWIM6Q9HCJ5 1215 aa6.7□□□□□ -1.34
RNU6-239P-201ENST00000390990 ARSIQ5FYB1 569 aa6.68□□□□□ -1.34
RNU6-239P-201ENST00000390990 SOX12O15370 315 aa6.66□□□□□ -1.34
RNU6-239P-201ENST00000390990 KHSRPQ92945 711 aaKnown RBP eCLIP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms