RNA–Protein interactions for RNA: ENST00000390879.1

SNORA48.1-201, Transcript of small nucleolar RNA, H/ACA box 48, humanhuman

BASIC

Gene SNORA48, Length 135 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleolus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA48.1-201ENST00000390879 SPDYE6P0CI01 402 aa3.91□□□□□ -1.78
SNORA48.1-201ENST00000390879 SPDYE2Q495Y8 402 aa3.91□□□□□ -1.78
SNORA48.1-201ENST00000390879 SSUH2Q9Y2M2 353 aa3.91□□□□□ -1.78
SNORA48.1-201ENST00000390879 PLEKHG5O94827 1062 aa3.9□□□□□ -1.79
SNORA48.1-201ENST00000390879 HS6ST3Q8IZP7 471 aa3.89□□□□□ -1.79
SNORA48.1-201ENST00000390879 ZBTB47Q9UFB7 747 aaPredicted RBP3.88□□□□□ -1.79
SNORA48.1-201ENST00000390879 PIP4P2Q8N4L2 257 aa3.87□□□□□ -1.79
SNORA48.1-201ENST00000390879 RNF25Q96BH1 459 aaPredicted RBP3.87□□□□□ -1.79
SNORA48.1-201ENST00000390879 TRIM41Q8WV44 630 aa3.86□□□□□ -1.79
SNORA48.1-201ENST00000390879 DNAJC5Q9H3Z4 198 aa3.86□□□□□ -1.79
SNORA48.1-201ENST00000390879 TULP1O00294 542 aaPredicted RBP3.85□□□□□ -1.79
SNORA48.1-201ENST00000390879 NKX1-1Q15270 411 aaPredicted RBP3.85□□□□□ -1.79
SNORA48.1-201ENST00000390879 TIMELESSQ9UNS1 1208 aa3.85□□□□□ -1.79
SNORA48.1-201ENST00000390879 GSE1Q14687 1217 aa3.84□□□□□ -1.79
SNORA48.1-201ENST00000390879 DCAF8Q5TAQ9 597 aa3.84□□□□□ -1.79
SNORA48.1-201ENST00000390879 STK25O00506 426 aa3.83□□□□□ -1.8
SNORA48.1-201ENST00000390879 RIOK3O14730 519 aaKnown RBP3.83□□□□□ -1.8
SNORA48.1-201ENST00000390879 GTPBP6O43824 516 aaPredicted RBP3.82□□□□□ -1.8
SNORA48.1-201ENST00000390879 GTF3C3Q9Y5Q9 886 aa3.82□□□□□ -1.8
SNORA48.1-201ENST00000390879 NUBP1P53384 320 aa3.81□□□□□ -1.8
SNORA48.1-201ENST00000390879 PCDH10Q9P2E7 1040 aa3.8□□□□□ -1.8
SNORA48.1-201ENST00000390879 STK24Q9Y6E0 443 aa3.8□□□□□ -1.8
SNORA48.1-201ENST00000390879 VGFO15240 615 aaPredicted RBP3.79□□□□□ -1.8
SNORA48.1-201ENST00000390879 POTEIP0CG38 1075 aa3.79□□□□□ -1.8
SNORA48.1-201ENST00000390879 FAM212AQ96EL1 285 aa3.78□□□□□ -1.8
SNORA48.1-201ENST00000390879 BCL11BQ9C0K0 894 aaPredicted RBP3.78□□□□□ -1.8
SNORA48.1-201ENST00000390879 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.77□□□□□ -1.81
SNORA48.1-201ENST00000390879 GABBR2O75899 941 aa3.77□□□□□ -1.81
SNORA48.1-201ENST00000390879 ZFP91Q96JP5 570 aaPredicted RBP3.77□□□□□ -1.81
SNORA48.1-201ENST00000390879 RASEFQ8IZ41 740 aa3.76□□□□□ -1.81
SNORA48.1-201ENST00000390879 OTUD5Q96G74 571 aa3.76□□□□□ -1.81
SNORA48.1-201ENST00000390879 CLEC11AQ9Y240 323 aa3.76□□□□□ -1.81
SNORA48.1-201ENST00000390879 PYGBP11216 843 aa3.75□□□□□ -1.81
SNORA48.1-201ENST00000390879 TMEM132AQ24JP5 1023 aa3.75□□□□□ -1.81
SNORA48.1-201ENST00000390879 SPDYE1Q8NFV5 336 aaPredicted RBP3.75□□□□□ -1.81
SNORA48.1-201ENST00000390879 CREBZFQ9NS37 354 aa3.75□□□□□ -1.81
SNORA48.1-201ENST00000390879 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
SNORA48.1-201ENST00000390879 C14orf37Q86TY3 774 aa3.74□□□□□ -1.81
SNORA48.1-201ENST00000390879 P3H3Q8IVL6 736 aa3.74□□□□□ -1.81
SNORA48.1-201ENST00000390879 RYDENQ9NUL5 291 aaKnown RBP3.74□□□□□ -1.81
SNORA48.1-201ENST00000390879 PRR29P0C7W0 189 aa3.73□□□□□ -1.81
SNORA48.1-201ENST00000390879 CHRM1P11229 460 aaPredicted RBP3.73□□□□□ -1.81
SNORA48.1-201ENST00000390879 MNX1P50219 401 aaPredicted RBP3.73□□□□□ -1.81
SNORA48.1-201ENST00000390879 LMOD2Q6P5Q4 547 aa3.73□□□□□ -1.81
SNORA48.1-201ENST00000390879 CADPS2Q86UW7 1296 aa3.73□□□□□ -1.81
SNORA48.1-201ENST00000390879 KCNV2Q8TDN2 545 aa3.73□□□□□ -1.81
SNORA48.1-201ENST00000390879 WDR70Q9NW82 654 aa3.73□□□□□ -1.81
SNORA48.1-201ENST00000390879 SGIP1Q9BQI5 828 aa3.72□□□□□ -1.81
SNORA48.1-201ENST00000390879 ERICH6Q7L0X2 663 aa3.71□□□□□ -1.82
SNORA48.1-201ENST00000390879 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.71□□□□□ -1.82
SNORA48.1-201ENST00000390879 RBM42Q9BTD8 480 aaKnown RBP3.71□□□□□ -1.82
SNORA48.1-201ENST00000390879 ARXQ96QS3 562 aa3.7□□□□□ -1.82
SNORA48.1-201ENST00000390879 AKT1S1Q96B36 256 aa3.69□□□□□ -1.82
SNORA48.1-201ENST00000390879 FXR2P51116 673 aaKnown RBP eCLIP3.68□□□□□ -1.82
SNORA48.1-201ENST00000390879 BRPF1P55201 1214 aaPredicted RBP3.68□□□□□ -1.82
SNORA48.1-201ENST00000390879 REM2Q8IYK8 340 aaPredicted RBP3.68□□□□□ -1.82
SNORA48.1-201ENST00000390879 TSPYL2Q9H2G4 693 aaPredicted RBP3.68□□□□□ -1.82
SNORA48.1-201ENST00000390879 NEUROD2Q15784 382 aa3.67□□□□□ -1.82
SNORA48.1-201ENST00000390879 HOMEZQ8IX15 550 aa3.67□□□□□ -1.82
SNORA48.1-201ENST00000390879 PCDHB8Q9UN66 801 aa3.67□□□□□ -1.82
SNORA48.1-201ENST00000390879 PCDHB13Q9Y5F0 798 aa3.67□□□□□ -1.82
SNORA48.1-201ENST00000390879 POTEB2H3BUK9 544 aa3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 SUPT5HO00267 1087 aaKnown RBP3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 PDAP1Q13442 181 aaKnown RBP3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 ZNF467Q7Z7K2 595 aaPredicted RBP3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 ZC3H15Q8WU90 426 aaKnown RBP3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 MFRPQ9BY79 579 aa3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 SLC24A3Q9HC58 644 aa3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 DAXXQ9UER7 740 aaPredicted RBP3.66□□□□□ -1.82
SNORA48.1-201ENST00000390879 PITPNM1O00562 1244 aa3.65□□□□□ -1.83
SNORA48.1-201ENST00000390879 SEMA3EO15041 775 aa3.65□□□□□ -1.83
SNORA48.1-201ENST00000390879 PPP1R37O75864 691 aa3.65□□□□□ -1.83
SNORA48.1-201ENST00000390879 CHADLQ6NUI6 762 aa3.65□□□□□ -1.83
SNORA48.1-201ENST00000390879 PSEN1P49768 467 aa3.64□□□□□ -1.83
SNORA48.1-201ENST00000390879 E2F4Q16254 413 aa3.64□□□□□ -1.83
SNORA48.1-201ENST00000390879 ARHGEF1Q92888 912 aaKnown RBP3.64□□□□□ -1.83
SNORA48.1-201ENST00000390879 TESPA1A2RU30 521 aaPredicted RBP3.62□□□□□ -1.83
SNORA48.1-201ENST00000390879 EFCAB3Q8N7B9 438 aa3.62□□□□□ -1.83
SNORA48.1-201ENST00000390879 PHF8Q9UPP1 1060 aa3.62□□□□□ -1.83
SNORA48.1-201ENST00000390879 MMRN1Q13201 1228 aa3.61□□□□□ -1.83
SNORA48.1-201ENST00000390879 CABP2Q9NPB3 220 aa3.61□□□□□ -1.83
SNORA48.1-201ENST00000390879 NLRP6P59044 892 aa3.6□□□□□ -1.83
SNORA48.1-201ENST00000390879 ZNF579Q8NAF0 562 aaKnown RBP3.6□□□□□ -1.83
SNORA48.1-201ENST00000390879 FBXO22Q8NEZ5 403 aa3.6□□□□□ -1.83
SNORA48.1-201ENST00000390879 LARP6Q9BRS8 491 aaKnown RBP3.6□□□□□ -1.83
SNORA48.1-201ENST00000390879 FARP1Q9Y4F1 1045 aaPredicted RBP3.6□□□□□ -1.83
SNORA48.1-201ENST00000390879 C19orf67A6NJJ6 358 aa3.59□□□□□ -1.83
SNORA48.1-201ENST00000390879 ZMYND10O75800 440 aa3.59□□□□□ -1.83
SNORA48.1-201ENST00000390879 SMYD5Q6GMV2 418 aa3.59□□□□□ -1.83
SNORA48.1-201ENST00000390879 IFNL1Q8IU54 200 aa3.59□□□□□ -1.83
SNORA48.1-201ENST00000390879 CCDC61Q9Y6R9 512 aa3.59□□□□□ -1.83
SNORA48.1-201ENST00000390879 NCKAP5LQ9HCH0 1330 aa3.59□□□□□ -1.83
SNORA48.1-201ENST00000390879 GPBP1L1Q9HC44 474 aaPredicted RBP3.58□□□□□ -1.84
SNORA48.1-201ENST00000390879 SOX12O15370 315 aa3.57□□□□□ -1.84
SNORA48.1-201ENST00000390879 MAP3K13O43283 966 aa3.57□□□□□ -1.84
SNORA48.1-201ENST00000390879 RBM26Q5T8P6 1007 aaKnown RBP3.57□□□□□ -1.84
SNORA48.1-201ENST00000390879 PAK3O75914 559 aaPredicted RBP3.56□□□□□ -1.84
SNORA48.1-201ENST00000390879 PRKAR2AP13861 404 aaKnown RBP3.56□□□□□ -1.84
SNORA48.1-201ENST00000390879 PDE4AP27815 886 aa3.56□□□□□ -1.84
SNORA48.1-201ENST00000390879 BARGINQ6ZT62 677 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms