RNA–Protein interactions for RNA: ENST00000390497.1

TRAJ40-201, Transcript of T cell receptor alpha joining 40, humanhuman

APPRIS P1 BASIC

Gene TRAJ40, Length 61 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ40-201ENST00000390497 REM2Q8IYK8 340 aaPredicted RBP6.68□□□□□ -1.34
TRAJ40-201ENST00000390497 FAM212AQ96EL1 285 aa6.67□□□□□ -1.34
TRAJ40-201ENST00000390497 DNAJC5Q9H3Z4 198 aa6.67□□□□□ -1.34
TRAJ40-201ENST00000390497 CHRM1P11229 460 aaPredicted RBP6.66□□□□□ -1.34
TRAJ40-201ENST00000390497 HS6ST3Q8IZP7 471 aa6.66□□□□□ -1.34
TRAJ40-201ENST00000390497 CREBZFQ9NS37 354 aa6.65□□□□□ -1.34
TRAJ40-201ENST00000390497 RIOK3O14730 519 aaKnown RBP6.64□□□□□ -1.35
TRAJ40-201ENST00000390497 KDM2AQ9Y2K7 1162 aa6.62□□□□□ -1.35
TRAJ40-201ENST00000390497 VGFO15240 615 aaPredicted RBP6.61□□□□□ -1.35
TRAJ40-201ENST00000390497 MNX1P50219 401 aaPredicted RBP6.61□□□□□ -1.35
TRAJ40-201ENST00000390497 SGIP1Q9BQI5 828 aa6.6□□□□□ -1.35
TRAJ40-201ENST00000390497 RYDENQ9NUL5 291 aaKnown RBP6.6□□□□□ -1.35
TRAJ40-201ENST00000390497 TSHZ2Q9NRE2 1034 aa6.59□□□□□ -1.35
TRAJ40-201ENST00000390497 RNF25Q96BH1 459 aaPredicted RBP6.58□□□□□ -1.36
TRAJ40-201ENST00000390497 STK25O00506 426 aa6.56□□□□□ -1.36
TRAJ40-201ENST00000390497 PITPNM1O00562 1244 aa6.55□□□□□ -1.36
TRAJ40-201ENST00000390497 RASEFQ8IZ41 740 aa6.55□□□□□ -1.36
TRAJ40-201ENST00000390497 GTPBP6O43824 516 aaPredicted RBP6.52□□□□□ -1.37
TRAJ40-201ENST00000390497 PYGBP11216 843 aa6.51□□□□□ -1.37
TRAJ40-201ENST00000390497 NKX1-1Q15270 411 aaPredicted RBP6.5□□□□□ -1.37
TRAJ40-201ENST00000390497 ZNF467Q7Z7K2 595 aaPredicted RBP6.5□□□□□ -1.37
TRAJ40-201ENST00000390497 STK24Q9Y6E0 443 aa6.5□□□□□ -1.37
TRAJ40-201ENST00000390497 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.49□□□□□ -1.37
TRAJ40-201ENST00000390497 NBR1Q14596 966 aa6.49□□□□□ -1.37
TRAJ40-201ENST00000390497 ZFP91Q96JP5 570 aaPredicted RBP6.49□□□□□ -1.37
TRAJ40-201ENST00000390497 BCL11BQ9C0K0 894 aaPredicted RBP6.49□□□□□ -1.37
TRAJ40-201ENST00000390497 FARP1Q9Y4F1 1045 aaPredicted RBP6.48□□□□□ -1.37
TRAJ40-201ENST00000390497 TSPYL2Q9H2G4 693 aaPredicted RBP6.46□□□□□ -1.38
TRAJ40-201ENST00000390497 PAK3O75914 559 aaPredicted RBP6.44□□□□□ -1.38
TRAJ40-201ENST00000390497 PRKCSHP14314 528 aaPredicted RBP6.44□□□□□ -1.38
TRAJ40-201ENST00000390497 PDAP1Q13442 181 aaKnown RBP6.44□□□□□ -1.38
TRAJ40-201ENST00000390497 PRKAR2AP13861 404 aaKnown RBP6.43□□□□□ -1.38
TRAJ40-201ENST00000390497 TPRNQ4KMQ1 711 aa6.43□□□□□ -1.38
TRAJ40-201ENST00000390497 CHADLQ6NUI6 762 aa6.43□□□□□ -1.38
TRAJ40-201ENST00000390497 ZNF579Q8NAF0 562 aaKnown RBP6.43□□□□□ -1.38
TRAJ40-201ENST00000390497 FXR2P51116 673 aaKnown RBP eCLIP6.42□□□□□ -1.38
TRAJ40-201ENST00000390497 CCDC61Q9Y6R9 512 aa6.4□□□□□ -1.38
TRAJ40-201ENST00000390497 WDR70Q9NW82 654 aa6.39□□□□□ -1.39
TRAJ40-201ENST00000390497 PSEN1P49768 467 aa6.38□□□□□ -1.39
TRAJ40-201ENST00000390497 P3H3Q8IVL6 736 aa6.38□□□□□ -1.39
TRAJ40-201ENST00000390497 SOX12O15370 315 aa6.36□□□□□ -1.39
TRAJ40-201ENST00000390497 PCDHB8Q9UN66 801 aa6.36□□□□□ -1.39
TRAJ40-201ENST00000390497 PCDHB13Q9Y5F0 798 aa6.36□□□□□ -1.39
TRAJ40-201ENST00000390497 CHRDL2Q6WN34 429 aa6.34□□□□□ -1.39
TRAJ40-201ENST00000390497 NLRP6P59044 892 aa6.33□□□□□ -1.4
TRAJ40-201ENST00000390497 KIF12Q96FN5 646 aa6.33□□□□□ -1.4
TRAJ40-201ENST00000390497 MAP3K13O43283 966 aa6.31□□□□□ -1.4
TRAJ40-201ENST00000390497 IFNL1Q8IU54 200 aa6.31□□□□□ -1.4
TRAJ40-201ENST00000390497 PIP4P2Q8N4L2 257 aa6.31□□□□□ -1.4
TRAJ40-201ENST00000390497 MFRPQ9BY79 579 aa6.31□□□□□ -1.4
TRAJ40-201ENST00000390497 TULP1O00294 542 aaPredicted RBP6.29□□□□□ -1.4
TRAJ40-201ENST00000390497 EFCAB3Q8N7B9 438 aa6.28□□□□□ -1.4
TRAJ40-201ENST00000390497 ZRANB1Q9UGI0 708 aa6.28□□□□□ -1.4
TRAJ40-201ENST00000390497 ARHGEF1Q92888 912 aaKnown RBP6.27□□□□□ -1.41
TRAJ40-201ENST00000390497 CABP2Q9NPB3 220 aa6.27□□□□□ -1.41
TRAJ40-201ENST00000390497 CD44P16070 742 aaKnown RBP6.26□□□□□ -1.41
TRAJ40-201ENST00000390497 FBXO22Q8NEZ5 403 aa6.26□□□□□ -1.41
TRAJ40-201ENST00000390497 PDE4AP27815 886 aa6.25□□□□□ -1.41
TRAJ40-201ENST00000390497 GOLGA2Q08379 1002 aa6.25□□□□□ -1.41
TRAJ40-201ENST00000390497 CADPS2Q86UW7 1296 aa6.25□□□□□ -1.41
TRAJ40-201ENST00000390497 E2F4Q16254 413 aa6.24□□□□□ -1.41
TRAJ40-201ENST00000390497 PHF8Q9UPP1 1060 aa6.24□□□□□ -1.41
TRAJ40-201ENST00000390497 PPP1R37O75864 691 aa6.23□□□□□ -1.41
TRAJ40-201ENST00000390497 KCNV2Q8TDN2 545 aa6.23□□□□□ -1.41
TRAJ40-201ENST00000390497 MKRN3Q13064 507 aaKnown RBP6.22□□□□□ -1.41
TRAJ40-201ENST00000390497 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.22□□□□□ -1.41
TRAJ40-201ENST00000390497 CLCN6P51797 869 aa6.21□□□□□ -1.42
TRAJ40-201ENST00000390497 TMEM106CQ9BVX2 250 aa6.2□□□□□ -1.42
TRAJ40-201ENST00000390497 SMYD5Q6GMV2 418 aa6.19□□□□□ -1.42
TRAJ40-201ENST00000390497 LMOD2Q6P5Q4 547 aa6.18□□□□□ -1.42
TRAJ40-201ENST00000390497 PHF12Q96QT6 1004 aa6.18□□□□□ -1.42
TRAJ40-201ENST00000390497 LARP6Q9BRS8 491 aaKnown RBP6.18□□□□□ -1.42
TRAJ40-201ENST00000390497 C19orf67A6NJJ6 358 aa6.17□□□□□ -1.42
TRAJ40-201ENST00000390497 TIE1P35590 1138 aa6.17□□□□□ -1.42
TRAJ40-201ENST00000390497 ARIH1Q9Y4X5 557 aaPredicted RBP6.17□□□□□ -1.42
TRAJ40-201ENST00000390497 MFSD10Q14728 455 aa6.16□□□□□ -1.42
TRAJ40-201ENST00000390497 ERICH6Q7L0X2 663 aa6.15□□□□□ -1.42
TRAJ40-201ENST00000390497 DDX27Q96GQ7 796 aaKnown RBP6.15□□□□□ -1.42
TRAJ40-201ENST00000390497 MS4A4AQ96JQ5 239 aa6.15□□□□□ -1.42
TRAJ40-201ENST00000390497 TESPA1A2RU30 521 aaPredicted RBP6.14□□□□□ -1.43
TRAJ40-201ENST00000390497 MS4A3Q96HJ5 214 aa6.14□□□□□ -1.43
TRAJ40-201ENST00000390497 CRISPLD2Q9H0B8 497 aa6.14□□□□□ -1.43
TRAJ40-201ENST00000390497 NCKAP5LQ9HCH0 1330 aa6.14□□□□□ -1.43
TRAJ40-201ENST00000390497 ILDR1Q86SU0 546 aaPredicted RBP6.13□□□□□ -1.43
TRAJ40-201ENST00000390497 TTLL13PA6NNM8 815 aa6.12□□□□□ -1.43
TRAJ40-201ENST00000390497 CAMK2BQ13554 666 aa6.12□□□□□ -1.43
TRAJ40-201ENST00000390497 TMEM132AQ24JP5 1023 aa6.12□□□□□ -1.43
TRAJ40-201ENST00000390497 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.12□□□□□ -1.43
TRAJ40-201ENST00000390497 SEMA3EO15041 775 aa6.11□□□□□ -1.43
TRAJ40-201ENST00000390497 GPHNQ9NQX3 736 aaPredicted RBP6.11□□□□□ -1.43
TRAJ40-201ENST00000390497 ZC3H15Q8WU90 426 aaKnown RBP6.09□□□□□ -1.43
TRAJ40-201ENST00000390497 BMP2KQ9NSY1 1161 aaPredicted RBP6.08□□□□□ -1.44
TRAJ40-201ENST00000390497 TRPC6Q9Y210 931 aa6.08□□□□□ -1.44
TRAJ40-201ENST00000390497 GTF3C3Q9Y5Q9 886 aa6.08□□□□□ -1.44
TRAJ40-201ENST00000390497 TRIM35Q9UPQ4 493 aa6.07□□□□□ -1.44
TRAJ40-201ENST00000390497 SPDYE16A6NNV3 312 aaPredicted RBP6.06□□□□□ -1.44
TRAJ40-201ENST00000390497 PPP1R15BQ5SWA1 713 aa6.06□□□□□ -1.44
TRAJ40-201ENST00000390497 TMC2Q8TDI7 906 aa6.06□□□□□ -1.44
TRAJ40-201ENST00000390497 DAXXQ9UER7 740 aaPredicted RBP6.06□□□□□ -1.44
TRAJ40-201ENST00000390497 G3V3G9 751 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms