RNA–Protein interactions for RNA: ENST00000390454.2

TRAV25-201, Transcript of T cell receptor alpha variable 25, humanhuman

APPRIS P1 BASIC

Gene TRAV25, Length 403 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25-201ENST00000390454 ZBTB47Q9UFB7 747 aaPredicted RBP10.81□□□□□ -0.68
TRAV25-201ENST00000390454 ABCB7O75027 752 aa10.76□□□□□ -0.69
TRAV25-201ENST00000390454 ZNF692Q9BU19 519 aaPredicted RBP10.73□□□□□ -0.69
TRAV25-201ENST00000390454 P3H3Q8IVL6 736 aa10.68□□□□□ -0.7
TRAV25-201ENST00000390454 GTPBP6O43824 516 aaPredicted RBP10.66□□□□□ -0.7
TRAV25-201ENST00000390454 RANGAP1P46060 587 aaPredicted RBP10.65□□□□□ -0.7
TRAV25-201ENST00000390454 GSE1Q14687 1217 aa10.65□□□□□ -0.7
TRAV25-201ENST00000390454 NKX1-1Q15270 411 aaPredicted RBP10.63□□□□□ -0.71
TRAV25-201ENST00000390454 RYDENQ9NUL5 291 aaKnown RBP10.63□□□□□ -0.71
TRAV25-201ENST00000390454 POTEHQ6S545 545 aa10.62□□□□□ -0.71
TRAV25-201ENST00000390454 SPDYE2BA6NHP3 402 aa10.61□□□□□ -0.71
TRAV25-201ENST00000390454 SPDYE6P0CI01 402 aa10.61□□□□□ -0.71
TRAV25-201ENST00000390454 SPDYE2Q495Y8 402 aa10.61□□□□□ -0.71
TRAV25-201ENST00000390454 PABPN1Q86U42 306 aaKnown RBP eCLIP10.6□□□□□ -0.71
TRAV25-201ENST00000390454 RIOK3O14730 519 aaKnown RBP10.59□□□□□ -0.71
TRAV25-201ENST00000390454 SUPT5HO00267 1087 aaKnown RBP10.58□□□□□ -0.72
TRAV25-201ENST00000390454 LMOD2Q6P5Q4 547 aa10.58□□□□□ -0.72
TRAV25-201ENST00000390454 RNF25Q96BH1 459 aaPredicted RBP10.58□□□□□ -0.72
TRAV25-201ENST00000390454 STK25O00506 426 aa10.57□□□□□ -0.72
TRAV25-201ENST00000390454 SSUH2Q9Y2M2 353 aa10.57□□□□□ -0.72
TRAV25-201ENST00000390454 PODXL2Q9NZ53 605 aa10.55□□□□□ -0.72
TRAV25-201ENST00000390454 BRPF1P55201 1214 aaPredicted RBP10.54□□□□□ -0.72
TRAV25-201ENST00000390454 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.54□□□□□ -0.72
TRAV25-201ENST00000390454 WDR70Q9NW82 654 aa10.53□□□□□ -0.72
TRAV25-201ENST00000390454 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
TRAV25-201ENST00000390454 NEUROD2Q15784 382 aa10.48□□□□□ -0.73
TRAV25-201ENST00000390454 DCAF8Q5TAQ9 597 aa10.48□□□□□ -0.73
TRAV25-201ENST00000390454 OSCARQ8IYS5 282 aa10.47□□□□□ -0.73
TRAV25-201ENST00000390454 STK24Q9Y6E0 443 aa10.44□□□□□ -0.74
TRAV25-201ENST00000390454 KCNV2Q8TDN2 545 aa10.41□□□□□ -0.74
TRAV25-201ENST00000390454 SGIP1Q9BQI5 828 aa10.4□□□□□ -0.74
TRAV25-201ENST00000390454 BCL11BQ9C0K0 894 aaPredicted RBP10.4□□□□□ -0.74
TRAV25-201ENST00000390454 NUBP1P53384 320 aa10.38□□□□□ -0.75
TRAV25-201ENST00000390454 FAM212AQ96EL1 285 aa10.38□□□□□ -0.75
TRAV25-201ENST00000390454 ZC3H15Q8WU90 426 aaKnown RBP10.37□□□□□ -0.75
TRAV25-201ENST00000390454 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.35□□□□□ -0.75
TRAV25-201ENST00000390454 ZFP91Q96JP5 570 aaPredicted RBP10.35□□□□□ -0.75
TRAV25-201ENST00000390454 RBM42Q9BTD8 480 aaKnown RBP10.34□□□□□ -0.75
TRAV25-201ENST00000390454 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
TRAV25-201ENST00000390454 SLC24A3Q9HC58 644 aa10.33□□□□□ -0.76
TRAV25-201ENST00000390454 UBTFP17480 764 aaKnown RBP10.31□□□□□ -0.76
TRAV25-201ENST00000390454 ARHGEF1Q92888 912 aaKnown RBP10.3□□□□□ -0.76
TRAV25-201ENST00000390454 ZMYND15Q9H091 742 aa10.27□□□□□ -0.77
TRAV25-201ENST00000390454 RSPH6AQ9H0K4 717 aa10.27□□□□□ -0.77
TRAV25-201ENST00000390454 NPM2Q86SE8 214 aaKnown RBP10.25□□□□□ -0.77
TRAV25-201ENST00000390454 CADPS2Q86UW7 1296 aa10.25□□□□□ -0.77
TRAV25-201ENST00000390454 TRIM26Q12899 539 aaPredicted RBP10.24□□□□□ -0.77
TRAV25-201ENST00000390454 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
TRAV25-201ENST00000390454 AKT1S1Q96B36 256 aa10.21□□□□□ -0.77
TRAV25-201ENST00000390454 TESPA1A2RU30 521 aaPredicted RBP10.2□□□□□ -0.78
TRAV25-201ENST00000390454 ZMYND10O75800 440 aa10.19□□□□□ -0.78
TRAV25-201ENST00000390454 E2F4Q16254 413 aa10.19□□□□□ -0.78
TRAV25-201ENST00000390454 SEMA3EO15041 775 aa10.17□□□□□ -0.78
TRAV25-201ENST00000390454 PYGBP11216 843 aa10.16□□□□□ -0.78
TRAV25-201ENST00000390454 ARID3AQ99856 593 aa10.13□□□□□ -0.79
TRAV25-201ENST00000390454 REM2Q8IYK8 340 aaPredicted RBP10.12□□□□□ -0.79
TRAV25-201ENST00000390454 AK7Q96M32 723 aa10.12□□□□□ -0.79
TRAV25-201ENST00000390454 BARGINQ6ZT62 677 aa10.11□□□□□ -0.79
TRAV25-201ENST00000390454 RASEFQ8IZ41 740 aa10.11□□□□□ -0.79
TRAV25-201ENST00000390454 HRCP23327 699 aa10.1□□□□□ -0.79
TRAV25-201ENST00000390454 IL27Q8NEV9 243 aa10.09□□□□□ -0.79
TRAV25-201ENST00000390454 ZNF467Q7Z7K2 595 aaPredicted RBP10.08□□□□□ -0.8
TRAV25-201ENST00000390454 KRI1Q8N9T8 703 aaKnown RBP10.07□□□□□ -0.8
TRAV25-201ENST00000390454 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
TRAV25-201ENST00000390454 ZBTB7CA1YPR0 619 aa10.06□□□□□ -0.8
TRAV25-201ENST00000390454 GPBP1L1Q9HC44 474 aaPredicted RBP10.06□□□□□ -0.8
TRAV25-201ENST00000390454 CREBZFQ9NS37 354 aa10.05□□□□□ -0.8
TRAV25-201ENST00000390454 PRR29P0C7W0 189 aa10.04□□□□□ -0.8
TRAV25-201ENST00000390454 PDAP1Q13442 181 aaKnown RBP10.04□□□□□ -0.8
TRAV25-201ENST00000390454 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
TRAV25-201ENST00000390454 KDM4CQ9H3R0 1056 aa10.03□□□□□ -0.8
TRAV25-201ENST00000390454 CCDC9Q9Y3X0 531 aaKnown RBP10.03□□□□□ -0.8
TRAV25-201ENST00000390454 PDIA4P13667 645 aaKnown RBP10.02□□□□□ -0.81
TRAV25-201ENST00000390454 CHRDL2Q6WN34 429 aa10.02□□□□□ -0.81
TRAV25-201ENST00000390454 MFRPQ9BY79 579 aa10.01□□□□□ -0.81
TRAV25-201ENST00000390454 PITPNM1O00562 1244 aa10□□□□□ -0.81
TRAV25-201ENST00000390454 GPIHBP1Q8IV16 184 aa9.99□□□□□ -0.81
TRAV25-201ENST00000390454 CLEC11AQ9Y240 323 aa9.98□□□□□ -0.81
TRAV25-201ENST00000390454 ZCCHC6Q5VYS8 1495 aaKnown RBP9.97□□□□□ -0.81
TRAV25-201ENST00000390454 SHROOM4Q9ULL8 1493 aa9.97□□□□□ -0.81
TRAV25-201ENST00000390454 APBB1O00213 710 aa9.96□□□□□ -0.82
TRAV25-201ENST00000390454 PDE4DQ08499 809 aa9.95□□□□□ -0.82
TRAV25-201ENST00000390454 FLIIQ13045 1269 aa9.95□□□□□ -0.82
TRAV25-201ENST00000390454 PDE4AP27815 886 aa9.94□□□□□ -0.82
TRAV25-201ENST00000390454 NLRP6P59044 892 aa9.94□□□□□ -0.82
TRAV25-201ENST00000390454 C1orf115Q9H7X2 142 aa9.94□□□□□ -0.82
TRAV25-201ENST00000390454 ARIH1Q9Y4X5 557 aaPredicted RBP9.94□□□□□ -0.82
TRAV25-201ENST00000390454 MKRN3Q13064 507 aaKnown RBP9.93□□□□□ -0.82
TRAV25-201ENST00000390454 LARP6Q9BRS8 491 aaKnown RBP9.93□□□□□ -0.82
TRAV25-201ENST00000390454 CCDC180Q9P1Z9 1646 aa9.93□□□□□ -0.82
TRAV25-201ENST00000390454 ARID3CA6NKF2 412 aa9.92□□□□□ -0.82
TRAV25-201ENST00000390454 TRIM66O15016 1216 aa9.92□□□□□ -0.82
TRAV25-201ENST00000390454 PPP1R37O75864 691 aa9.92□□□□□ -0.82
TRAV25-201ENST00000390454 PSEN1P49768 467 aa9.91□□□□□ -0.82
TRAV25-201ENST00000390454 ZNF316A6NFI3 1004 aaPredicted RBP9.9□□□□□ -0.82
TRAV25-201ENST00000390454 RBM26Q5T8P6 1007 aaKnown RBP9.89□□□□□ -0.83
TRAV25-201ENST00000390454 SOX12O15370 315 aa9.88□□□□□ -0.83
TRAV25-201ENST00000390454 FXR2P51116 673 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRAV25-201ENST00000390454 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
TRAV25-201ENST00000390454 PCDHB8Q9UN66 801 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms