RNA–Protein interactions for RNA: ENST00000385041.1

MIR548A1-201, Transcript of microRNA 548a-1, humanhuman

BASIC

Gene MIR548A1, Length 97 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548A1-201ENST00000385041 FAM163AQ96GL9 167 aaPredicted RBP6.88□□□□□ -1.31
MIR548A1-201ENST00000385041 NPM1P06748 294 aaKnown RBP eCLIP6.87□□□□□ -1.31
MIR548A1-201ENST00000385041 POTEJP0CG39 1038 aa6.86□□□□□ -1.31
MIR548A1-201ENST00000385041 PHF12Q96QT6 1004 aa6.86□□□□□ -1.31
MIR548A1-201ENST00000385041 ATMINO43313 823 aaPredicted RBP6.85□□□□□ -1.31
MIR548A1-201ENST00000385041 CDAN1Q8IWY9 1227 aa6.8□□□□□ -1.32
MIR548A1-201ENST00000385041 MS4A3Q96HJ5 214 aa6.79□□□□□ -1.32
MIR548A1-201ENST00000385041 MNX1P50219 401 aaPredicted RBP6.75□□□□□ -1.33
MIR548A1-201ENST00000385041 ATN1P54259 1190 aaPredicted RBP6.74□□□□□ -1.33
MIR548A1-201ENST00000385041 POTEFA5A3E0 1075 aa6.69□□□□□ -1.34
MIR548A1-201ENST00000385041 MMRN1Q13201 1228 aa6.68□□□□□ -1.34
MIR548A1-201ENST00000385041 TIE1P35590 1138 aa6.67□□□□□ -1.34
MIR548A1-201ENST00000385041 BMP2KQ9NSY1 1161 aaPredicted RBP6.66□□□□□ -1.34
MIR548A1-201ENST00000385041 CCDC61Q9Y6R9 512 aa6.66□□□□□ -1.34
MIR548A1-201ENST00000385041 SEC24BO95487 1268 aa6.65□□□□□ -1.34
MIR548A1-201ENST00000385041 SPNS2Q8IVW8 549 aa6.65□□□□□ -1.34
MIR548A1-201ENST00000385041 KIF12Q96FN5 646 aa6.65□□□□□ -1.34
MIR548A1-201ENST00000385041 ST18O60284 1047 aa6.64□□□□□ -1.35
MIR548A1-201ENST00000385041 IER5LQ5T953 404 aa6.63□□□□□ -1.35
MIR548A1-201ENST00000385041 TSPYL2Q9H2G4 693 aaPredicted RBP6.63□□□□□ -1.35
MIR548A1-201ENST00000385041 SPDYE4A6NLX3 237 aa6.62□□□□□ -1.35
MIR548A1-201ENST00000385041 TMEM121BQ9BXQ6 578 aaPredicted RBP6.62□□□□□ -1.35
MIR548A1-201ENST00000385041 SLAIN1Q8ND83 568 aa6.6□□□□□ -1.35
MIR548A1-201ENST00000385041 COLQQ9Y215 455 aaPredicted RBP6.59□□□□□ -1.35
MIR548A1-201ENST00000385041 TTLL13PA6NNM8 815 aa6.57□□□□□ -1.36
MIR548A1-201ENST00000385041 SNPHO15079 494 aa6.56□□□□□ -1.36
MIR548A1-201ENST00000385041 MAP3K13O43283 966 aa6.56□□□□□ -1.36
MIR548A1-201ENST00000385041 SGIP1Q9BQI5 828 aa6.56□□□□□ -1.36
MIR548A1-201ENST00000385041 TRPC6Q9Y210 931 aa6.55□□□□□ -1.36
MIR548A1-201ENST00000385041 TRIM35Q9UPQ4 493 aa6.53□□□□□ -1.36
MIR548A1-201ENST00000385041 PLEKHG5O94827 1062 aa6.5□□□□□ -1.37
MIR548A1-201ENST00000385041 PLCG2P16885 1265 aa6.48□□□□□ -1.37
MIR548A1-201ENST00000385041 PCDHB13Q9Y5F0 798 aa6.45□□□□□ -1.38
MIR548A1-201ENST00000385041 IRX5P78411 483 aaPredicted RBP6.44□□□□□ -1.38
MIR548A1-201ENST00000385041 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.44□□□□□ -1.38
MIR548A1-201ENST00000385041 RASEFQ8IZ41 740 aa6.43□□□□□ -1.38
MIR548A1-201ENST00000385041 MARVELD3Q96A59 401 aa6.43□□□□□ -1.38
MIR548A1-201ENST00000385041 OCEL1Q9H607 264 aa6.42□□□□□ -1.38
MIR548A1-201ENST00000385041 PROM2Q8N271 834 aa6.41□□□□□ -1.38
MIR548A1-201ENST00000385041 TMEM106CQ9BVX2 250 aa6.4□□□□□ -1.38
MIR548A1-201ENST00000385041 EMP3P54852 163 aa6.39□□□□□ -1.39
MIR548A1-201ENST00000385041 KRTAP3-3Q9BYR6 98 aa6.39□□□□□ -1.39
MIR548A1-201ENST00000385041 KRTAP3-2Q9BYR7 98 aa6.39□□□□□ -1.39
MIR548A1-201ENST00000385041 MIER1Q8N108 512 aa6.38□□□□□ -1.39
MIR548A1-201ENST00000385041 IFNL1Q8IU54 200 aa6.37□□□□□ -1.39
MIR548A1-201ENST00000385041 HS3ST6Q96QI5 342 aa6.37□□□□□ -1.39
MIR548A1-201ENST00000385041 ZBTB47Q9UFB7 747 aaPredicted RBP6.35□□□□□ -1.39
MIR548A1-201ENST00000385041 FAM205CA6NFA0 338 aa6.34□□□□□ -1.39
MIR548A1-201ENST00000385041 CSRNP3Q8WYN3 585 aa6.33□□□□□ -1.4
MIR548A1-201ENST00000385041 POTEB3A0JP26 581 aa6.31□□□□□ -1.4
MIR548A1-201ENST00000385041 POTEBQ6S5H4 581 aa6.31□□□□□ -1.4
MIR548A1-201ENST00000385041 C3orf67Q6ZVT6 689 aa6.31□□□□□ -1.4
MIR548A1-201ENST00000385041 L3MBTL3Q96JM7 780 aaPredicted RBP6.31□□□□□ -1.4
MIR548A1-201ENST00000385041 NUBP1P53384 320 aa6.29□□□□□ -1.4
MIR548A1-201ENST00000385041 RNF166Q96A37 237 aaPredicted RBP6.29□□□□□ -1.4
MIR548A1-201ENST00000385041 FAM212AQ96EL1 285 aa6.29□□□□□ -1.4
MIR548A1-201ENST00000385041 PLCD3Q8N3E9 789 aa6.26□□□□□ -1.41
MIR548A1-201ENST00000385041 PTGER2P43116 358 aa6.23□□□□□ -1.41
MIR548A1-201ENST00000385041 PDCD7Q8N8D1 485 aaKnown RBP6.23□□□□□ -1.41
MIR548A1-201ENST00000385041 MYT1LQ9UL68 1186 aa6.22□□□□□ -1.41
MIR548A1-201ENST00000385041 HOXB1P14653 301 aaPredicted RBP6.21□□□□□ -1.42
MIR548A1-201ENST00000385041 GOLGA2Q08379 1002 aa6.21□□□□□ -1.42
MIR548A1-201ENST00000385041 MKRN3Q13064 507 aaKnown RBP6.21□□□□□ -1.42
MIR548A1-201ENST00000385041 ERBB3P21860 1342 aa6.2□□□□□ -1.42
MIR548A1-201ENST00000385041 ZNF710Q8N1W2 664 aa6.18□□□□□ -1.42
MIR548A1-201ENST00000385041 DOK7Q18PE1 504 aa6.17□□□□□ -1.42
MIR548A1-201ENST00000385041 PYGBP11216 843 aa6.16□□□□□ -1.42
MIR548A1-201ENST00000385041 HOXB3P14651 431 aaPredicted RBP6.16□□□□□ -1.42
MIR548A1-201ENST00000385041 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.16□□□□□ -1.42
MIR548A1-201ENST00000385041 DCAF8Q5TAQ9 597 aa6.15□□□□□ -1.42
MIR548A1-201ENST00000385041 PCDHB8Q9UN66 801 aa6.15□□□□□ -1.42
MIR548A1-201ENST00000385041 RIMBP2O15034 1052 aa6.14□□□□□ -1.43
MIR548A1-201ENST00000385041 ZNF467Q7Z7K2 595 aaPredicted RBP6.14□□□□□ -1.43
MIR548A1-201ENST00000385041 ILDR1Q86SU0 546 aaPredicted RBP6.14□□□□□ -1.43
MIR548A1-201ENST00000385041 ZNF687Q8N1G0 1237 aa6.14□□□□□ -1.43
MIR548A1-201ENST00000385041 G3V3G9 751 aa6.13□□□□□ -1.43
MIR548A1-201ENST00000385041 ZSWIM6Q9HCJ5 1215 aa6.11□□□□□ -1.43
MIR548A1-201ENST00000385041 VARS2Q5ST30 1063 aaKnown RBP6.1□□□□□ -1.43
MIR548A1-201ENST00000385041 BOLA1Q9Y3E2 137 aa6.1□□□□□ -1.43
MIR548A1-201ENST00000385041 CHRM1P11229 460 aaPredicted RBP6.06□□□□□ -1.44
MIR548A1-201ENST00000385041 GSE1Q14687 1217 aa6.06□□□□□ -1.44
MIR548A1-201ENST00000385041 PSEN1P49768 467 aa6.04□□□□□ -1.44
MIR548A1-201ENST00000385041 PLA2G2EQ9NZK7 142 aa6.04□□□□□ -1.44
MIR548A1-201ENST00000385041 DPY19L2Q6NUT2 758 aa6.03□□□□□ -1.44
MIR548A1-201ENST00000385041 ANKRD13DQ6ZTN6 518 aa6.02□□□□□ -1.45
MIR548A1-201ENST00000385041 GPR153Q6NV75 609 aa6.01□□□□□ -1.45
MIR548A1-201ENST00000385041 HCSTQ9UBK5 93 aa6.01□□□□□ -1.45
MIR548A1-201ENST00000385041 PDAP1Q13442 181 aaKnown RBP6□□□□□ -1.45
MIR548A1-201ENST00000385041 LSM11P83369 360 aaKnown RBP eCLIP5.97□□□□□ -1.45
MIR548A1-201ENST00000385041 RGS20O76081 388 aa5.96□□□□□ -1.46
MIR548A1-201ENST00000385041 PBX2P40425 430 aa5.96□□□□□ -1.46
MIR548A1-201ENST00000385041 CABP2Q9NPB3 220 aa5.96□□□□□ -1.46
MIR548A1-201ENST00000385041 ZNF316A6NFI3 1004 aaPredicted RBP5.94□□□□□ -1.46
MIR548A1-201ENST00000385041 EHMT2Q96KQ7 1210 aa5.93□□□□□ -1.46
MIR548A1-201ENST00000385041 FBXO3Q9UK99 471 aa5.92□□□□□ -1.46
MIR548A1-201ENST00000385041 ARSIQ5FYB1 569 aa5.9□□□□□ -1.46
MIR548A1-201ENST00000385041 TMEM92Q6UXU6 159 aa5.89□□□□□ -1.47
MIR548A1-201ENST00000385041 MICALL2Q8IY33 904 aa5.89□□□□□ -1.47
MIR548A1-201ENST00000385041 KLHL34Q8N239 644 aa5.88□□□□□ -1.47
MIR548A1-201ENST00000385041 IRX2Q9BZI1 471 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms