RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 MS4A3Q96HJ5 214 aa9.52□□□□□ -0.89
RNU6-1040P-201ENST00000383974 ZBTB47Q9UFB7 747 aaPredicted RBP9.48□□□□□ -0.89
RNU6-1040P-201ENST00000383974 FBXO3Q9UK99 471 aa9.47□□□□□ -0.89
RNU6-1040P-201ENST00000383974 KIF12Q96FN5 646 aa9.45□□□□□ -0.9
RNU6-1040P-201ENST00000383974 NUBP1P53384 320 aa9.44□□□□□ -0.9
RNU6-1040P-201ENST00000383974 PELP1Q8IZL8 1130 aaKnown RBP9.42□□□□□ -0.9
RNU6-1040P-201ENST00000383974 MAP3K13O43283 966 aa9.41□□□□□ -0.9
RNU6-1040P-201ENST00000383974 ASTLQ6HA08 431 aaPredicted RBP9.41□□□□□ -0.9
RNU6-1040P-201ENST00000383974 ATMINO43313 823 aaPredicted RBP9.39□□□□□ -0.91
RNU6-1040P-201ENST00000383974 VASPP50552 380 aaPredicted RBP9.39□□□□□ -0.91
RNU6-1040P-201ENST00000383974 FAM212AQ96EL1 285 aa9.38□□□□□ -0.91
RNU6-1040P-201ENST00000383974 TRPC6Q9Y210 931 aa9.38□□□□□ -0.91
RNU6-1040P-201ENST00000383974 POTEB2H3BUK9 544 aa9.34□□□□□ -0.91
RNU6-1040P-201ENST00000383974 ATN1P54259 1190 aaPredicted RBP9.34□□□□□ -0.91
RNU6-1040P-201ENST00000383974 BMP2KQ9NSY1 1161 aaPredicted RBP9.34□□□□□ -0.91
RNU6-1040P-201ENST00000383974 METRNQ9UJH8 293 aa9.34□□□□□ -0.91
RNU6-1040P-201ENST00000383974 PCDHB13Q9Y5F0 798 aa9.33□□□□□ -0.92
RNU6-1040P-201ENST00000383974 TIE1P35590 1138 aa9.32□□□□□ -0.92
RNU6-1040P-201ENST00000383974 SLC39A7Q92504 469 aa9.32□□□□□ -0.92
RNU6-1040P-201ENST00000383974 SGIP1Q9BQI5 828 aa9.31□□□□□ -0.92
RNU6-1040P-201ENST00000383974 C7P10643 843 aa9.3□□□□□ -0.92
RNU6-1040P-201ENST00000383974 KLHL34Q8N239 644 aa9.3□□□□□ -0.92
RNU6-1040P-201ENST00000383974 DCAF8Q5TAQ9 597 aa9.29□□□□□ -0.92
RNU6-1040P-201ENST00000383974 IFNL1Q8IU54 200 aa9.29□□□□□ -0.92
RNU6-1040P-201ENST00000383974 TTLL13PA6NNM8 815 aa9.28□□□□□ -0.92
RNU6-1040P-201ENST00000383974 OTUD5Q96G74 571 aa9.27□□□□□ -0.93
RNU6-1040P-201ENST00000383974 PYGBP11216 843 aa9.26□□□□□ -0.93
RNU6-1040P-201ENST00000383974 POTEJP0CG39 1038 aa9.23□□□□□ -0.93
RNU6-1040P-201ENST00000383974 POTEFA5A3E0 1075 aa9.22□□□□□ -0.93
RNU6-1040P-201ENST00000383974 IFNLR1Q8IU57 520 aaPredicted RBP9.22□□□□□ -0.93
RNU6-1040P-201ENST00000383974 TRIM35Q9UPQ4 493 aa9.22□□□□□ -0.93
RNU6-1040P-201ENST00000383974 GSE1Q14687 1217 aa9.2□□□□□ -0.94
RNU6-1040P-201ENST00000383974 TMEM106CQ9BVX2 250 aa9.2□□□□□ -0.94
RNU6-1040P-201ENST00000383974 PCDHB8Q9UN66 801 aa9.18□□□□□ -0.94
RNU6-1040P-201ENST00000383974 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
RNU6-1040P-201ENST00000383974 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
RNU6-1040P-201ENST00000383974 SEC24BO95487 1268 aa9.16□□□□□ -0.94
RNU6-1040P-201ENST00000383974 IER5LQ5T953 404 aa9.16□□□□□ -0.94
RNU6-1040P-201ENST00000383974 MAMSTRQ6ZN01 415 aa9.14□□□□□ -0.95
RNU6-1040P-201ENST00000383974 SCUBE2Q9NQ36 999 aa9.13□□□□□ -0.95
RNU6-1040P-201ENST00000383974 CHRM1P11229 460 aaPredicted RBP9.11□□□□□ -0.95
RNU6-1040P-201ENST00000383974 ZNF467Q7Z7K2 595 aaPredicted RBP9.11□□□□□ -0.95
RNU6-1040P-201ENST00000383974 CIZ1Q9ULV3 898 aaPredicted RBP9.1□□□□□ -0.95
RNU6-1040P-201ENST00000383974 PLCG2P16885 1265 aa9.08□□□□□ -0.96
RNU6-1040P-201ENST00000383974 IRX5P78411 483 aaPredicted RBP9.08□□□□□ -0.96
RNU6-1040P-201ENST00000383974 PSEN1P49768 467 aa9.03□□□□□ -0.96
RNU6-1040P-201ENST00000383974 OCEL1Q9H607 264 aa9.02□□□□□ -0.97
RNU6-1040P-201ENST00000383974 GOLGA2Q08379 1002 aa9.01□□□□□ -0.97
RNU6-1040P-201ENST00000383974 PDAP1Q13442 181 aaKnown RBP9□□□□□ -0.97
RNU6-1040P-201ENST00000383974 POTEMA6NI47 508 aa8.98□□□□□ -0.97
RNU6-1040P-201ENST00000383974 MKRN3Q13064 507 aaKnown RBP8.98□□□□□ -0.97
RNU6-1040P-201ENST00000383974 PDCD7Q8N8D1 485 aaKnown RBP8.98□□□□□ -0.97
RNU6-1040P-201ENST00000383974 LCE2DQ5TA82 110 aaPredicted RBP8.97□□□□□ -0.97
RNU6-1040P-201ENST00000383974 TRIM41Q8WV44 630 aa8.97□□□□□ -0.97
RNU6-1040P-201ENST00000383974 POTEGQ6S5H5 508 aa8.96□□□□□ -0.98
RNU6-1040P-201ENST00000383974 SLAIN1Q8ND83 568 aa8.95□□□□□ -0.98
RNU6-1040P-201ENST00000383974 FAM163AQ96GL9 167 aaPredicted RBP8.95□□□□□ -0.98
RNU6-1040P-201ENST00000383974 CABP2Q9NPB3 220 aa8.94□□□□□ -0.98
RNU6-1040P-201ENST00000383974 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.93□□□□□ -0.98
RNU6-1040P-201ENST00000383974 RNF25Q96BH1 459 aaPredicted RBP8.91□□□□□ -0.98
RNU6-1040P-201ENST00000383974 ILDR1Q86SU0 546 aaPredicted RBP8.89□□□□□ -0.99
RNU6-1040P-201ENST00000383974 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.89□□□□□ -0.99
RNU6-1040P-201ENST00000383974 RIOK3O14730 519 aaKnown RBP8.87□□□□□ -0.99
RNU6-1040P-201ENST00000383974 L3MBTL3Q96JM7 780 aaPredicted RBP8.87□□□□□ -0.99
RNU6-1040P-201ENST00000383974 C3orf67Q6ZVT6 689 aa8.86□□□□□ -0.99
RNU6-1040P-201ENST00000383974 DPY19L2Q6NUT2 758 aa8.85□□□□□ -0.99
RNU6-1040P-201ENST00000383974 EFCAB3Q8N7B9 438 aa8.84□□□□□ -0.99
RNU6-1040P-201ENST00000383974 PLSCR2Q9NRY7 297 aa8.84□□□□□ -0.99
RNU6-1040P-201ENST00000383974 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.83□□□□□ -1
RNU6-1040P-201ENST00000383974 ST18O60284 1047 aa8.83□□□□□ -1
RNU6-1040P-201ENST00000383974 ZFP91Q96JP5 570 aaPredicted RBP8.83□□□□□ -1
RNU6-1040P-201ENST00000383974 VGFO15240 615 aaPredicted RBP8.82□□□□□ -1
RNU6-1040P-201ENST00000383974 BOLA1Q9Y3E2 137 aa8.8□□□□□ -1
RNU6-1040P-201ENST00000383974 PCDH10Q9P2E7 1040 aa8.78□□□□□ -1
RNU6-1040P-201ENST00000383974 G3V3G9 751 aa8.77□□□□□ -1.01
RNU6-1040P-201ENST00000383974 SNPHO15079 494 aa8.77□□□□□ -1.01
RNU6-1040P-201ENST00000383974 ECM2O94769 699 aaPredicted RBP8.75□□□□□ -1.01
RNU6-1040P-201ENST00000383974 SOX12O15370 315 aa8.74□□□□□ -1.01
RNU6-1040P-201ENST00000383974 PKD2Q13563 968 aa8.74□□□□□ -1.01
RNU6-1040P-201ENST00000383974 MS4A4AQ96JQ5 239 aa8.73□□□□□ -1.01
RNU6-1040P-201ENST00000383974 TMEM121BQ9BXQ6 578 aaPredicted RBP8.73□□□□□ -1.01
RNU6-1040P-201ENST00000383974 BCL11BQ9C0K0 894 aaPredicted RBP8.73□□□□□ -1.01
RNU6-1040P-201ENST00000383974 PHF8Q9UPP1 1060 aa8.73□□□□□ -1.01
RNU6-1040P-201ENST00000383974 TAOK2Q9UL54 1235 aa8.72□□□□□ -1.01
RNU6-1040P-201ENST00000383974 CDAN1Q8IWY9 1227 aa8.71□□□□□ -1.02
RNU6-1040P-201ENST00000383974 MARVELD3Q96A59 401 aa8.71□□□□□ -1.02
RNU6-1040P-201ENST00000383974 STK24Q9Y6E0 443 aa8.71□□□□□ -1.02
RNU6-1040P-201ENST00000383974 RGL2O15211 777 aa8.7□□□□□ -1.02
RNU6-1040P-201ENST00000383974 MICALL2Q8IY33 904 aa8.7□□□□□ -1.02
RNU6-1040P-201ENST00000383974 STK25O00506 426 aa8.69□□□□□ -1.02
RNU6-1040P-201ENST00000383974 HOXB3P14651 431 aaPredicted RBP8.66□□□□□ -1.02
RNU6-1040P-201ENST00000383974 FBXO22Q8NEZ5 403 aa8.66□□□□□ -1.02
RNU6-1040P-201ENST00000383974 NLRP6P59044 892 aa8.65□□□□□ -1.02
RNU6-1040P-201ENST00000383974 TMEM92Q6UXU6 159 aa8.65□□□□□ -1.02
RNU6-1040P-201ENST00000383974 MFRPQ9BY79 579 aa8.65□□□□□ -1.02
RNU6-1040P-201ENST00000383974 EMP3P54852 163 aa8.64□□□□□ -1.03
RNU6-1040P-201ENST00000383974 DOK7Q18PE1 504 aa8.6□□□□□ -1.03
RNU6-1040P-201ENST00000383974 ZNF710Q8N1W2 664 aa8.6□□□□□ -1.03
RNU6-1040P-201ENST00000383974 POTEB3A0JP26 581 aa8.58□□□□□ -1.04
RNU6-1040P-201ENST00000383974 FAM205CA6NFA0 338 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms