RNA–Protein interactions for RNA: ENST00000383888.1

RNU6-338P-201, Transcript of RNA, U6 small nuclear 338, pseudogene, humanhuman

BASIC

Gene RNU6-338P, Length 105 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-338P-201ENST00000383888 MS4A3Q96HJ5 214 aa9.08□□□□□ -0.96
RNU6-338P-201ENST00000383888 METRNQ9UJH8 293 aa9.08□□□□□ -0.96
RNU6-338P-201ENST00000383888 ATMINO43313 823 aaPredicted RBP9.06□□□□□ -0.96
RNU6-338P-201ENST00000383888 MAMSTRQ6ZN01 415 aa9.05□□□□□ -0.96
RNU6-338P-201ENST00000383888 POTEGQ6S5H5 508 aa9.04□□□□□ -0.96
RNU6-338P-201ENST00000383888 TSPYL2Q9H2G4 693 aaPredicted RBP9.03□□□□□ -0.96
RNU6-338P-201ENST00000383888 PCDH10Q9P2E7 1040 aa9.02□□□□□ -0.97
RNU6-338P-201ENST00000383888 PROM2Q8N271 834 aa8.99□□□□□ -0.97
RNU6-338P-201ENST00000383888 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
RNU6-338P-201ENST00000383888 POTEJP0CG39 1038 aa8.98□□□□□ -0.97
RNU6-338P-201ENST00000383888 ATN1P54259 1190 aaPredicted RBP8.97□□□□□ -0.97
RNU6-338P-201ENST00000383888 SCUBE2Q9NQ36 999 aa8.97□□□□□ -0.97
RNU6-338P-201ENST00000383888 PLEKHG5O94827 1062 aa8.96□□□□□ -0.98
RNU6-338P-201ENST00000383888 KIF12Q96FN5 646 aa8.96□□□□□ -0.98
RNU6-338P-201ENST00000383888 MIER1Q8N108 512 aa8.91□□□□□ -0.98
RNU6-338P-201ENST00000383888 FAM163AQ96GL9 167 aaPredicted RBP8.91□□□□□ -0.98
RNU6-338P-201ENST00000383888 BMP2KQ9NSY1 1161 aaPredicted RBP8.91□□□□□ -0.98
RNU6-338P-201ENST00000383888 TIE1P35590 1138 aa8.9□□□□□ -0.98
RNU6-338P-201ENST00000383888 MAP3K13O43283 966 aa8.89□□□□□ -0.99
RNU6-338P-201ENST00000383888 POTEFA5A3E0 1075 aa8.86□□□□□ -0.99
RNU6-338P-201ENST00000383888 TRPC6Q9Y210 931 aa8.86□□□□□ -0.99
RNU6-338P-201ENST00000383888 SEC24BO95487 1268 aa8.85□□□□□ -0.99
RNU6-338P-201ENST00000383888 LCE2DQ5TA82 110 aaPredicted RBP8.85□□□□□ -0.99
RNU6-338P-201ENST00000383888 RASEFQ8IZ41 740 aa8.85□□□□□ -0.99
RNU6-338P-201ENST00000383888 SGIP1Q9BQI5 828 aa8.83□□□□□ -1
RNU6-338P-201ENST00000383888 TTLL13PA6NNM8 815 aa8.82□□□□□ -1
RNU6-338P-201ENST00000383888 IER5LQ5T953 404 aa8.8□□□□□ -1
RNU6-338P-201ENST00000383888 PLCD3Q8N3E9 789 aa8.8□□□□□ -1
RNU6-338P-201ENST00000383888 COLQQ9Y215 455 aaPredicted RBP8.8□□□□□ -1
RNU6-338P-201ENST00000383888 ZBTB47Q9UFB7 747 aaPredicted RBP8.79□□□□□ -1
RNU6-338P-201ENST00000383888 PCDHB13Q9Y5F0 798 aa8.78□□□□□ -1
RNU6-338P-201ENST00000383888 TRIM35Q9UPQ4 493 aa8.77□□□□□ -1.01
RNU6-338P-201ENST00000383888 NUBP1P53384 320 aa8.72□□□□□ -1.01
RNU6-338P-201ENST00000383888 CDAN1Q8IWY9 1227 aa8.71□□□□□ -1.02
RNU6-338P-201ENST00000383888 IFNL1Q8IU54 200 aa8.7□□□□□ -1.02
RNU6-338P-201ENST00000383888 SLAIN1Q8ND83 568 aa8.7□□□□□ -1.02
RNU6-338P-201ENST00000383888 FAM212AQ96EL1 285 aa8.7□□□□□ -1.02
RNU6-338P-201ENST00000383888 TMEM106CQ9BVX2 250 aa8.69□□□□□ -1.02
RNU6-338P-201ENST00000383888 PLCG2P16885 1265 aa8.68□□□□□ -1.02
RNU6-338P-201ENST00000383888 ST18O60284 1047 aa8.65□□□□□ -1.02
RNU6-338P-201ENST00000383888 IRX5P78411 483 aaPredicted RBP8.63□□□□□ -1.03
RNU6-338P-201ENST00000383888 OCEL1Q9H607 264 aa8.62□□□□□ -1.03
RNU6-338P-201ENST00000383888 SNPHO15079 494 aa8.59□□□□□ -1.03
RNU6-338P-201ENST00000383888 DCAF8Q5TAQ9 597 aa8.59□□□□□ -1.03
RNU6-338P-201ENST00000383888 TMEM121BQ9BXQ6 578 aaPredicted RBP8.59□□□□□ -1.03
RNU6-338P-201ENST00000383888 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.57□□□□□ -1.04
RNU6-338P-201ENST00000383888 PYGBP11216 843 aa8.55□□□□□ -1.04
RNU6-338P-201ENST00000383888 FKBP8Q14318 412 aa8.52□□□□□ -1.05
RNU6-338P-201ENST00000383888 PCDHB8Q9UN66 801 aa8.52□□□□□ -1.05
RNU6-338P-201ENST00000383888 FBXO3Q9UK99 471 aa8.51□□□□□ -1.05
RNU6-338P-201ENST00000383888 MMRN1Q13201 1228 aa8.5□□□□□ -1.05
RNU6-338P-201ENST00000383888 SPNS2Q8IVW8 549 aa8.5□□□□□ -1.05
RNU6-338P-201ENST00000383888 GOLGA2Q08379 1002 aa8.48□□□□□ -1.05
RNU6-338P-201ENST00000383888 MARVELD3Q96A59 401 aa8.48□□□□□ -1.05
RNU6-338P-201ENST00000383888 ZNF467Q7Z7K2 595 aaPredicted RBP8.47□□□□□ -1.05
RNU6-338P-201ENST00000383888 L3MBTL3Q96JM7 780 aaPredicted RBP8.47□□□□□ -1.05
RNU6-338P-201ENST00000383888 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
RNU6-338P-201ENST00000383888 GSE1Q14687 1217 aa8.46□□□□□ -1.06
RNU6-338P-201ENST00000383888 C3orf67Q6ZVT6 689 aa8.46□□□□□ -1.06
RNU6-338P-201ENST00000383888 PDCD7Q8N8D1 485 aaKnown RBP8.44□□□□□ -1.06
RNU6-338P-201ENST00000383888 KLHL34Q8N239 644 aa8.43□□□□□ -1.06
RNU6-338P-201ENST00000383888 CHRM1P11229 460 aaPredicted RBP8.42□□□□□ -1.06
RNU6-338P-201ENST00000383888 EMP3P54852 163 aa8.41□□□□□ -1.06
RNU6-338P-201ENST00000383888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.41□□□□□ -1.06
RNU6-338P-201ENST00000383888 PSEN1P49768 467 aa8.38□□□□□ -1.07
RNU6-338P-201ENST00000383888 VASPP50552 380 aaPredicted RBP8.35□□□□□ -1.07
RNU6-338P-201ENST00000383888 HS3ST6Q96QI5 342 aa8.35□□□□□ -1.07
RNU6-338P-201ENST00000383888 FAM205CA6NFA0 338 aa8.34□□□□□ -1.07
RNU6-338P-201ENST00000383888 ILDR1Q86SU0 546 aaPredicted RBP8.34□□□□□ -1.07
RNU6-338P-201ENST00000383888 PDAP1Q13442 181 aaKnown RBP8.33□□□□□ -1.08
RNU6-338P-201ENST00000383888 G3V3G9 751 aa8.32□□□□□ -1.08
RNU6-338P-201ENST00000383888 POTEB3A0JP26 581 aa8.31□□□□□ -1.08
RNU6-338P-201ENST00000383888 POTEBQ6S5H4 581 aa8.31□□□□□ -1.08
RNU6-338P-201ENST00000383888 KRTAP3-3Q9BYR6 98 aa8.31□□□□□ -1.08
RNU6-338P-201ENST00000383888 KRTAP3-2Q9BYR7 98 aa8.31□□□□□ -1.08
RNU6-338P-201ENST00000383888 DPY19L2Q6NUT2 758 aa8.29□□□□□ -1.08
RNU6-338P-201ENST00000383888 BOLA1Q9Y3E2 137 aa8.29□□□□□ -1.08
RNU6-338P-201ENST00000383888 CABP2Q9NPB3 220 aa8.27□□□□□ -1.09
RNU6-338P-201ENST00000383888 ZNF710Q8N1W2 664 aa8.26□□□□□ -1.09
RNU6-338P-201ENST00000383888 HOXB3P14651 431 aaPredicted RBP8.24□□□□□ -1.09
RNU6-338P-201ENST00000383888 HOXB1P14653 301 aaPredicted RBP8.24□□□□□ -1.09
RNU6-338P-201ENST00000383888 DOK7Q18PE1 504 aa8.23□□□□□ -1.09
RNU6-338P-201ENST00000383888 SPOCK2Q92563 424 aa8.23□□□□□ -1.09
RNU6-338P-201ENST00000383888 CIZ1Q9ULV3 898 aaPredicted RBP8.23□□□□□ -1.09
RNU6-338P-201ENST00000383888 ERBB3P21860 1342 aa8.22□□□□□ -1.09
RNU6-338P-201ENST00000383888 RIMBP2O15034 1052 aa8.2□□□□□ -1.1
RNU6-338P-201ENST00000383888 IFNLR1Q8IU57 520 aaPredicted RBP8.17□□□□□ -1.1
RNU6-338P-201ENST00000383888 EFCAB3Q8N7B9 438 aa8.14□□□□□ -1.11
RNU6-338P-201ENST00000383888 TRIM41Q8WV44 630 aa8.14□□□□□ -1.11
RNU6-338P-201ENST00000383888 RNF166Q96A37 237 aaPredicted RBP8.14□□□□□ -1.11
RNU6-338P-201ENST00000383888 ZSWIM6Q9HCJ5 1215 aa8.14□□□□□ -1.11
RNU6-338P-201ENST00000383888 VARS2Q5ST30 1063 aaKnown RBP8.13□□□□□ -1.11
RNU6-338P-201ENST00000383888 MYT1LQ9UL68 1186 aa8.11□□□□□ -1.11
RNU6-338P-201ENST00000383888 ZNF687Q8N1G0 1237 aa8.1□□□□□ -1.11
RNU6-338P-201ENST00000383888 MICALL2Q8IY33 904 aa8.09□□□□□ -1.11
RNU6-338P-201ENST00000383888 SOX12O15370 315 aa8.08□□□□□ -1.12
RNU6-338P-201ENST00000383888 PTGER2P43116 358 aa8.07□□□□□ -1.12
RNU6-338P-201ENST00000383888 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
RNU6-338P-201ENST00000383888 TMEM92Q6UXU6 159 aa8.06□□□□□ -1.12
RNU6-338P-201ENST00000383888 RIOK3O14730 519 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms