RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 PLPPR3Q6T4P5 718 aa9.55□□□□□ -0.88
CCDC171-201ENST00000380701 HSP90AA1P07900 732 aaKnown RBP9.54□□□□□ -0.88
CCDC171-201ENST00000380701 KANK1Q14678 1352 aa9.54□□□□□ -0.88
CCDC171-201ENST00000380701 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
CCDC171-201ENST00000380701 CEP164Q9UPV0 1460 aa9.53□□□□□ -0.88
CCDC171-201ENST00000380701 PDS5BQ9NTI5 1447 aa9.53□□□□□ -0.88
CCDC171-201ENST00000380701 KCNH8Q96L42 1107 aa9.53□□□□□ -0.88
CCDC171-201ENST00000380701 CHMP4BQ9H444 224 aaKnown RBP9.53□□□□□ -0.88
CCDC171-201ENST00000380701 EIF4G2P78344 907 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC171-201ENST00000380701 CHIC2Q9UKJ5 165 aa9.52□□□□□ -0.89
CCDC171-201ENST00000380701 SCAF1Q9H7N4 1312 aaKnown RBP9.52□□□□□ -0.89
CCDC171-201ENST00000380701 CARMIL2Q6F5E8 1435 aa9.51□□□□□ -0.89
CCDC171-201ENST00000380701 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
CCDC171-201ENST00000380701 NUDCQ9Y266 331 aa9.48□□□□□ -0.89
CCDC171-201ENST00000380701 CDK11BP21127 795 aaKnown RBP9.48□□□□□ -0.89
CCDC171-201ENST00000380701 CCNB3Q8WWL7 1395 aa9.47□□□□□ -0.89
CCDC171-201ENST00000380701 TNIKQ9UKE5 1360 aa9.46□□□□□ -0.89
CCDC171-201ENST00000380701 SMARCA2P51531 1590 aa9.46□□□□□ -0.89
CCDC171-201ENST00000380701 CHMP4AQ9BY43 222 aa9.46□□□□□ -0.9
CCDC171-201ENST00000380701 KDM2AQ9Y2K7 1162 aa9.45□□□□□ -0.9
CCDC171-201ENST00000380701 MS4A1P11836 297 aa9.45□□□□□ -0.9
CCDC171-201ENST00000380701 HNRNPUQ00839 825 aaKnown RBP eCLIP9.44□□□□□ -0.9
CCDC171-201ENST00000380701 KNSTRNQ9Y448 316 aa9.44□□□□□ -0.9
CCDC171-201ENST00000380701 BCL11AQ9H165 835 aa9.44□□□□□ -0.9
CCDC171-201ENST00000380701 POGKQ9P215 609 aa9.44□□□□□ -0.9
CCDC171-201ENST00000380701 TIMELESSQ9UNS1 1208 aa9.43□□□□□ -0.9
CCDC171-201ENST00000380701 MRS2Q9HD23 443 aa9.43□□□□□ -0.9
CCDC171-201ENST00000380701 A0A0G2JS52 829 aa9.43□□□□□ -0.9
CCDC171-201ENST00000380701 ANP32EQ9BTT0 268 aa9.43□□□□□ -0.9
CCDC171-201ENST00000380701 MAPK8IP3Q9UPT6 1336 aa9.41□□□□□ -0.9
CCDC171-201ENST00000380701 TRHP20396 242 aaPredicted RBP9.41□□□□□ -0.9
CCDC171-201ENST00000380701 MYO15BQ96JP2 1530 aa9.4□□□□□ -0.9
CCDC171-201ENST00000380701 CEP162Q5TB80 1403 aa9.4□□□□□ -0.9
CCDC171-201ENST00000380701 CARMIL1Q5VZK9 1371 aa9.4□□□□□ -0.9
CCDC171-201ENST00000380701 CASC1Q6TDU7 716 aa9.4□□□□□ -0.9
CCDC171-201ENST00000380701 RRP7BPQ9NSQ0 103 aa9.4□□□□□ -0.9
CCDC171-201ENST00000380701 FAM9BQ8IZU0 186 aa9.4□□□□□ -0.9
CCDC171-201ENST00000380701 RSPH4AQ5TD94 716 aa9.4□□□□□ -0.91
CCDC171-201ENST00000380701 CCDC136Q96JN2 1154 aa9.39□□□□□ -0.91
CCDC171-201ENST00000380701 DDX10Q13206 875 aaKnown RBP9.38□□□□□ -0.91
CCDC171-201ENST00000380701 EFCAB2Q5VUJ9 269 aa9.38□□□□□ -0.91
CCDC171-201ENST00000380701 ZBTB7CA1YPR0 619 aa9.38□□□□□ -0.91
CCDC171-201ENST00000380701 CFAP44Q96MT7 982 aa9.38□□□□□ -0.91
CCDC171-201ENST00000380701 NCLP19338 710 aaKnown RBP9.37□□□□□ -0.91
CCDC171-201ENST00000380701 CARD11Q9BXL7 1154 aa9.36□□□□□ -0.91
CCDC171-201ENST00000380701 CUX2O14529 1486 aa9.36□□□□□ -0.91
CCDC171-201ENST00000380701 BECN1Q14457 450 aa9.36□□□□□ -0.91
CCDC171-201ENST00000380701 GTF3C3Q9Y5Q9 886 aa9.36□□□□□ -0.91
CCDC171-201ENST00000380701 FMN1Q68DA7 1419 aa9.35□□□□□ -0.91
CCDC171-201ENST00000380701 GOLGA6L22H0YM25 854 aa9.34□□□□□ -0.91
CCDC171-201ENST00000380701 TMF1P82094 1093 aa9.34□□□□□ -0.91
CCDC171-201ENST00000380701 ABCC8Q09428 1581 aa9.34□□□□□ -0.91
CCDC171-201ENST00000380701 DDRGK1Q96HY6 314 aa9.34□□□□□ -0.91
CCDC171-201ENST00000380701 NPHP1O15259 732 aa9.33□□□□□ -0.92
CCDC171-201ENST00000380701 RGL3Q3MIN7 710 aa9.33□□□□□ -0.92
CCDC171-201ENST00000380701 HDAC5Q9UQL6 1122 aa9.32□□□□□ -0.92
CCDC171-201ENST00000380701 CALD1Q05682 793 aaKnown RBP9.32□□□□□ -0.92
CCDC171-201ENST00000380701 ZRSR1Q15695 479 aaKnown RBP9.31□□□□□ -0.92
CCDC171-201ENST00000380701 LMOD2Q6P5Q4 547 aa9.3□□□□□ -0.92
CCDC171-201ENST00000380701 EIF4G1Q04637 1599 aaKnown RBP9.3□□□□□ -0.92
CCDC171-201ENST00000380701 HDGFL2Q7Z4V5 671 aaPredicted RBP9.3□□□□□ -0.92
CCDC171-201ENST00000380701 SOGA1O94964 1423 aa9.3□□□□□ -0.92
CCDC171-201ENST00000380701 FTSJ3Q8IY81 847 aaKnown RBP9.3□□□□□ -0.92
CCDC171-201ENST00000380701 EID1Q9Y6B2 187 aa9.3□□□□□ -0.92
CCDC171-201ENST00000380701 FKBP8Q14318 412 aa9.29□□□□□ -0.92
CCDC171-201ENST00000380701 EIF3AQ14152 1382 aaKnown RBP9.29□□□□□ -0.92
CCDC171-201ENST00000380701 ANKRD30AQ9BXX3 1397 aa9.28□□□□□ -0.92
CCDC171-201ENST00000380701 CADPSQ9ULU8 1353 aa9.28□□□□□ -0.92
CCDC171-201ENST00000380701 GOLGA2Q08379 1002 aa9.27□□□□□ -0.93
CCDC171-201ENST00000380701 TMX4Q9H1E5 349 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-201ENST00000380701 ARXQ96QS3 562 aa9.27□□□□□ -0.93
CCDC171-201ENST00000380701 ARHGAP35Q9NRY4 1499 aa9.27□□□□□ -0.93
CCDC171-201ENST00000380701 CECR2Q9BXF3 1484 aa9.26□□□□□ -0.93
CCDC171-201ENST00000380701 SALL2Q9Y467 1007 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-201ENST00000380701 PPM1GO15355 546 aaPredicted RBP9.25□□□□□ -0.93
CCDC171-201ENST00000380701 RTF1Q92541 710 aaKnown RBP9.24□□□□□ -0.93
CCDC171-201ENST00000380701 SRPK2P78362 688 aaKnown RBP9.24□□□□□ -0.93
CCDC171-201ENST00000380701 CCDC18Q5T9S5 1454 aa9.23□□□□□ -0.93
CCDC171-201ENST00000380701 OS9Q13438 667 aaPredicted RBP9.22□□□□□ -0.93
CCDC171-201ENST00000380701 UACAQ9BZF9 1416 aa9.22□□□□□ -0.93
CCDC171-201ENST00000380701 NRDCO43847 1150 aa9.21□□□□□ -0.93
CCDC171-201ENST00000380701 GGT6Q6P531 493 aa9.21□□□□□ -0.93
CCDC171-201ENST00000380701 IPO8O15397 1037 aaKnown RBP9.21□□□□□ -0.93
CCDC171-201ENST00000380701 MORC1Q86VD1 984 aa9.21□□□□□ -0.94
CCDC171-201ENST00000380701 MLECQ14165 292 aa9.21□□□□□ -0.94
CCDC171-201ENST00000380701 TERF2IPQ9NYB0 399 aa9.21□□□□□ -0.94
CCDC171-201ENST00000380701 GOLGA6L6A8MZA4 724 aa9.21□□□□□ -0.94
CCDC171-201ENST00000380701 VPS8Q8N3P4 1428 aa9.2□□□□□ -0.94
CCDC171-201ENST00000380701 SPAG9O60271 1321 aaKnown RBP9.2□□□□□ -0.94
CCDC171-201ENST00000380701 MCCP23508 829 aa9.2□□□□□ -0.94
CCDC171-201ENST00000380701 DCAF11Q8TEB1 546 aa9.19□□□□□ -0.94
CCDC171-201ENST00000380701 U2SURPO15042 1029 aaKnown RBP9.19□□□□□ -0.94
CCDC171-201ENST00000380701 LMOD3Q0VAK6 560 aa9.19□□□□□ -0.94
CCDC171-201ENST00000380701 SETD5Q9C0A6 1442 aa9.19□□□□□ -0.94
CCDC171-201ENST00000380701 PLEKHG5O94827 1062 aa9.18□□□□□ -0.94
CCDC171-201ENST00000380701 RAPGEF2Q9Y4G8 1499 aa9.18□□□□□ -0.94
CCDC171-201ENST00000380701 FGD1P98174 961 aa9.18□□□□□ -0.94
CCDC171-201ENST00000380701 STAC3Q96MF2 364 aa9.18□□□□□ -0.94
CCDC171-201ENST00000380701 TOP2AP11388 1531 aaKnown RBP9.18□□□□□ -0.94
CCDC171-201ENST00000380701 OSCARQ8IYS5 282 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 338.2 ms