RNA–Protein interactions for RNA: ENST00000378182.3

TRIM13-202, Transcript of tripartite motif containing 13, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM13, Length 7,249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-202ENST00000378182 SENP3-EIF4A1A0A087X0R7 540 aa18.85■□□□□ 0.61
TRIM13-202ENST00000378182 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
TRIM13-202ENST00000378182 TRHP20396 242 aaPredicted RBP18.84■□□□□ 0.61
TRIM13-202ENST00000378182 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.84■□□□□ 0.61
TRIM13-202ENST00000378182 SCRIBQ14160 1630 aa18.79■□□□□ 0.6
TRIM13-202ENST00000378182 HIRIP3Q9BW71 556 aaPredicted RBP18.79■□□□□ 0.6
TRIM13-202ENST00000378182 LAS1LQ9Y4W2 734 aaKnown RBP18.78■□□□□ 0.6
TRIM13-202ENST00000378182 IRX6P78412 446 aaPredicted RBP18.78■□□□□ 0.6
TRIM13-202ENST00000378182 TSPY4P0CV99 314 aa18.77■□□□□ 0.6
TRIM13-202ENST00000378182 TSPY10P0CW01 314 aa18.77■□□□□ 0.6
TRIM13-202ENST00000378182 CCDC136Q96JN2 1154 aa18.75■□□□□ 0.59
TRIM13-202ENST00000378182 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
TRIM13-202ENST00000378182 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
TRIM13-202ENST00000378182 CLSTN1O94985 981 aa18.7■□□□□ 0.58
TRIM13-202ENST00000378182 NCLP19338 710 aaKnown RBP18.66■□□□□ 0.58
TRIM13-202ENST00000378182 RRP7BPQ9NSQ0 103 aa18.65■□□□□ 0.58
TRIM13-202ENST00000378182 SOX12O15370 315 aa18.63■□□□□ 0.57
TRIM13-202ENST00000378182 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
TRIM13-202ENST00000378182 GOLGA2Q08379 1002 aa18.63■□□□□ 0.57
TRIM13-202ENST00000378182 NAP1L2Q9ULW6 460 aaPredicted RBP18.63■□□□□ 0.57
TRIM13-202ENST00000378182 ISY1Q9ULR0 285 aaKnown RBP18.62■□□□□ 0.57
TRIM13-202ENST00000378182 MLECQ14165 292 aa18.62■□□□□ 0.57
TRIM13-202ENST00000378182 ZRSR1Q15695 479 aaKnown RBP18.62■□□□□ 0.57
TRIM13-202ENST00000378182 TNNT2P45379 298 aaPredicted RBP18.61■□□□□ 0.57
TRIM13-202ENST00000378182 NEUROD2Q15784 382 aa18.59■□□□□ 0.57
TRIM13-202ENST00000378182 MTUS2Q5JR59 1369 aa18.57■□□□□ 0.56
TRIM13-202ENST00000378182 OS9Q13438 667 aaPredicted RBP18.54■□□□□ 0.56
TRIM13-202ENST00000378182 POGKQ9P215 609 aa18.53■□□□□ 0.56
TRIM13-202ENST00000378182 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
TRIM13-202ENST00000378182 FTSJ3Q8IY81 847 aaKnown RBP18.52■□□□□ 0.55
TRIM13-202ENST00000378182 CASC1Q6TDU7 716 aa18.51■□□□□ 0.55
TRIM13-202ENST00000378182 ACIN1Q9UKV3 1341 aaKnown RBP18.49■□□□□ 0.55
TRIM13-202ENST00000378182 PTMAP06454 111 aaKnown RBP18.47■□□□□ 0.55
TRIM13-202ENST00000378182 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.47■□□□□ 0.55
TRIM13-202ENST00000378182 FGD1P98174 961 aa18.47■□□□□ 0.55
TRIM13-202ENST00000378182 PLCB2Q00722 1185 aa18.47■□□□□ 0.55
TRIM13-202ENST00000378182 CFAP53Q96M91 514 aa18.47■□□□□ 0.55
TRIM13-202ENST00000378182 TRIM44Q96DX7 344 aaPredicted RBP18.44■□□□□ 0.54
TRIM13-202ENST00000378182 DNTTIP2Q5QJE6 756 aaKnown RBP18.43■□□□□ 0.54
TRIM13-202ENST00000378182 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
TRIM13-202ENST00000378182 CCDC9Q9Y3X0 531 aaKnown RBP18.43■□□□□ 0.54
TRIM13-202ENST00000378182 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
TRIM13-202ENST00000378182 GLIPR1L2Q4G1C9 344 aa18.41■□□□□ 0.54
TRIM13-202ENST00000378182 ERCC6Q03468 1493 aa18.41■□□□□ 0.54
TRIM13-202ENST00000378182 KCNJ4P48050 445 aa18.41■□□□□ 0.54
TRIM13-202ENST00000378182 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
TRIM13-202ENST00000378182 U2SURPO15042 1029 aaKnown RBP18.41■□□□□ 0.54
TRIM13-202ENST00000378182 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
TRIM13-202ENST00000378182 BECN1Q14457 450 aa18.4■□□□□ 0.54
TRIM13-202ENST00000378182 SAFB2Q14151 953 aaKnown RBP eCLIP18.4■□□□□ 0.54
TRIM13-202ENST00000378182 PRM3Q9NNZ6 103 aa18.38■□□□□ 0.53
TRIM13-202ENST00000378182 GOLGA6L22H0YM25 854 aa18.37■□□□□ 0.53
TRIM13-202ENST00000378182 FRAT1Q92837 279 aaPredicted RBP18.37■□□□□ 0.53
TRIM13-202ENST00000378182 PAK3O75914 559 aaPredicted RBP18.37■□□□□ 0.53
TRIM13-202ENST00000378182 CC2D1BQ5T0F9 858 aaKnown RBP18.35■□□□□ 0.53
TRIM13-202ENST00000378182 EIF4G2P78344 907 aaKnown RBP eCLIP18.35■□□□□ 0.53
TRIM13-202ENST00000378182 ANO8Q9HCE9 1232 aaPredicted RBP18.3■□□□□ 0.52
TRIM13-202ENST00000378182 CARD11Q9BXL7 1154 aa18.28■□□□□ 0.52
TRIM13-202ENST00000378182 STK26Q9P289 416 aa18.28■□□□□ 0.52
TRIM13-202ENST00000378182 CFDP1Q9UEE9 299 aaPredicted RBP18.27■□□□□ 0.52
TRIM13-202ENST00000378182 CSB-PGBD3P0DP91 1061 aa18.27■□□□□ 0.51
TRIM13-202ENST00000378182 NUDCQ9Y266 331 aa18.26■□□□□ 0.51
TRIM13-202ENST00000378182 SRPK2P78362 688 aaKnown RBP18.26■□□□□ 0.51
TRIM13-202ENST00000378182 TMX4Q9H1E5 349 aaPredicted RBP18.25■□□□□ 0.51
TRIM13-202ENST00000378182 PDE4CQ08493 712 aa18.25■□□□□ 0.51
TRIM13-202ENST00000378182 DDRGK1Q96HY6 314 aa18.25■□□□□ 0.51
TRIM13-202ENST00000378182 RGS3P49796 1198 aa18.24■□□□□ 0.51
TRIM13-202ENST00000378182 HSP90AB1P08238 724 aaKnown RBP18.24■□□□□ 0.51
TRIM13-202ENST00000378182 G3V3G9 751 aa18.23■□□□□ 0.51
TRIM13-202ENST00000378182 DCAF8Q5TAQ9 597 aa18.23■□□□□ 0.51
TRIM13-202ENST00000378182 APBB1O00213 710 aa18.22■□□□□ 0.51
TRIM13-202ENST00000378182 GNL2Q13823 731 aaKnown RBP18.21■□□□□ 0.51
TRIM13-202ENST00000378182 CDCA8Q53HL2 280 aa18.21■□□□□ 0.51
TRIM13-202ENST00000378182 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.51
TRIM13-202ENST00000378182 SPRYD3Q8NCJ5 442 aa18.2■□□□□ 0.5
TRIM13-202ENST00000378182 GOLGA6L6A8MZA4 724 aa18.17■□□□□ 0.5
TRIM13-202ENST00000378182 ERICH6BQ5W0A0 696 aa18.17■□□□□ 0.5
TRIM13-202ENST00000378182 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
TRIM13-202ENST00000378182 RTF1Q92541 710 aaKnown RBP18.17■□□□□ 0.5
TRIM13-202ENST00000378182 CHMP3Q9Y3E7 222 aa18.16■□□□□ 0.5
TRIM13-202ENST00000378182 MIER1Q8N108 512 aa18.15■□□□□ 0.5
TRIM13-202ENST00000378182 GOLGA6L4A6NEF3 574 aa18.14■□□□□ 0.49
TRIM13-202ENST00000378182 GGT6Q6P531 493 aa18.13■□□□□ 0.49
TRIM13-202ENST00000378182 AEBP2Q6ZN18 517 aaPredicted RBP18.13■□□□□ 0.49
TRIM13-202ENST00000378182 RSF1Q96T23 1441 aaPredicted RBP18.12■□□□□ 0.49
TRIM13-202ENST00000378182 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
TRIM13-202ENST00000378182 SUPT16HQ9Y5B9 1047 aaKnown RBP18.1■□□□□ 0.49
TRIM13-202ENST00000378182 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
TRIM13-202ENST00000378182 MSH5O43196 834 aa18.09■□□□□ 0.49
TRIM13-202ENST00000378182 PNNQ9H307 717 aaKnown RBP18.08■□□□□ 0.49
TRIM13-202ENST00000378182 NAP1L5Q96NT1 182 aaPredicted RBP18.07■□□□□ 0.48
TRIM13-202ENST00000378182 RTN4Q9NQC3 1192 aaKnown RBP18.07■□□□□ 0.48
TRIM13-202ENST00000378182 KANK1Q14678 1352 aa18.07■□□□□ 0.48
TRIM13-202ENST00000378182 TAF7LQ5H9L4 462 aa18.06■□□□□ 0.48
TRIM13-202ENST00000378182 DCAF11Q8TEB1 546 aa18.05■□□□□ 0.48
TRIM13-202ENST00000378182 VPS53Q5VIR6 699 aa18.05■□□□□ 0.48
TRIM13-202ENST00000378182 CLIP1P30622 1438 aa18.05■□□□□ 0.48
TRIM13-202ENST00000378182 KRI1Q8N9T8 703 aaKnown RBP18.04■□□□□ 0.48
TRIM13-202ENST00000378182 PHF23Q9BUL5 403 aaPredicted RBP18.04■□□□□ 0.48
TRIM13-202ENST00000378182 NOC3LQ8WTT2 800 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms