RNA–Protein interactions for RNA: ENST00000377464.5

RERE-202, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RERE, Length 6,733 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-202ENST00000377464 IRX6P78412 446 aaPredicted RBP17.15■□□□□ 0.34
RERE-202ENST00000377464 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
RERE-202ENST00000377464 KDM2AQ9Y2K7 1162 aa17.15■□□□□ 0.34
RERE-202ENST00000377464 GOLGA6L22H0YM25 854 aa17.14■□□□□ 0.33
RERE-202ENST00000377464 BECN1Q14457 450 aa17.14■□□□□ 0.33
RERE-202ENST00000377464 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
RERE-202ENST00000377464 CHIC2Q9UKJ5 165 aa17.07■□□□□ 0.32
RERE-202ENST00000377464 NPHP1O15259 732 aa17.07■□□□□ 0.32
RERE-202ENST00000377464 MRS2Q9HD23 443 aa17.07■□□□□ 0.32
RERE-202ENST00000377464 CASC1Q6TDU7 716 aa17.06■□□□□ 0.32
RERE-202ENST00000377464 CLSTN1O94985 981 aa17.05■□□□□ 0.32
RERE-202ENST00000377464 PLCB2Q00722 1185 aa17.04■□□□□ 0.32
RERE-202ENST00000377464 PPP1R15AO75807 674 aaPredicted RBP17.03■□□□□ 0.32
RERE-202ENST00000377464 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
RERE-202ENST00000377464 NAP1L5Q96NT1 182 aaPredicted RBP16.99■□□□□ 0.31
RERE-202ENST00000377464 GOLGA6L6A8MZA4 724 aa16.97■□□□□ 0.31
RERE-202ENST00000377464 NAP1L2Q9ULW6 460 aaPredicted RBP16.96■□□□□ 0.31
RERE-202ENST00000377464 ABCC9O60706 1549 aa16.96■□□□□ 0.31
RERE-202ENST00000377464 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
RERE-202ENST00000377464 AMER1Q5JTC6 1135 aaPredicted RBP16.95■□□□□ 0.3
RERE-202ENST00000377464 LAS1LQ9Y4W2 734 aaKnown RBP16.95■□□□□ 0.3
RERE-202ENST00000377464 SENP3-EIF4A1A0A087X0R7 540 aa16.92■□□□□ 0.3
RERE-202ENST00000377464 FTSJ3Q8IY81 847 aaKnown RBP16.92■□□□□ 0.3
RERE-202ENST00000377464 FGD1P98174 961 aa16.91■□□□□ 0.3
RERE-202ENST00000377464 HIRIP3Q9BW71 556 aaPredicted RBP16.9■□□□□ 0.3
RERE-202ENST00000377464 GOLGA2Q08379 1002 aa16.89■□□□□ 0.29
RERE-202ENST00000377464 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
RERE-202ENST00000377464 CSRNP3Q8WYN3 585 aa16.88■□□□□ 0.29
RERE-202ENST00000377464 TSPY4P0CV99 314 aa16.88■□□□□ 0.29
RERE-202ENST00000377464 TSPY10P0CW01 314 aa16.88■□□□□ 0.29
RERE-202ENST00000377464 LMOD2Q6P5Q4 547 aa16.88■□□□□ 0.29
RERE-202ENST00000377464 RTN4Q9NQC3 1192 aaKnown RBP16.87■□□□□ 0.29
RERE-202ENST00000377464 CFAP53Q96M91 514 aa16.86■□□□□ 0.29
RERE-202ENST00000377464 ISY1Q9ULR0 285 aaKnown RBP16.85■□□□□ 0.29
RERE-202ENST00000377464 ARID4BQ4LE39 1312 aaPredicted RBP16.85■□□□□ 0.29
RERE-202ENST00000377464 KCNJ4P48050 445 aa16.84■□□□□ 0.29
RERE-202ENST00000377464 PRM3Q9NNZ6 103 aa16.84■□□□□ 0.29
RERE-202ENST00000377464 HSP90AB1P08238 724 aaKnown RBP16.83■□□□□ 0.29
RERE-202ENST00000377464 NRDCO43847 1150 aa16.82■□□□□ 0.28
RERE-202ENST00000377464 NEUROD2Q15784 382 aa16.81■□□□□ 0.28
RERE-202ENST00000377464 ERICH6BQ5W0A0 696 aa16.8■□□□□ 0.28
RERE-202ENST00000377464 MAPK8IP3Q9UPT6 1336 aa16.77■□□□□ 0.28
RERE-202ENST00000377464 GOLGA6L4A6NEF3 574 aa16.77■□□□□ 0.28
RERE-202ENST00000377464 DRC7Q8IY82 874 aa16.77■□□□□ 0.28
RERE-202ENST00000377464 CHAF1AQ13111 956 aaPredicted RBP16.76■□□□□ 0.27
RERE-202ENST00000377464 RGL3Q3MIN7 710 aa16.76■□□□□ 0.27
RERE-202ENST00000377464 EIF4G2P78344 907 aaKnown RBP eCLIP16.75■□□□□ 0.27
RERE-202ENST00000377464 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
RERE-202ENST00000377464 RGS3P49796 1198 aa16.74■□□□□ 0.27
RERE-202ENST00000377464 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
RERE-202ENST00000377464 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
RERE-202ENST00000377464 KNSTRNQ9Y448 316 aa16.73■□□□□ 0.27
RERE-202ENST00000377464 NOC3LQ8WTT2 800 aaKnown RBP16.72■□□□□ 0.27
RERE-202ENST00000377464 RRP7BPQ9NSQ0 103 aa16.71■□□□□ 0.27
RERE-202ENST00000377464 KIAA2012Q0VF49 1180 aa16.7■□□□□ 0.26
RERE-202ENST00000377464 L1TD1Q5T7N2 865 aaKnown RBP16.7■□□□□ 0.26
RERE-202ENST00000377464 GNL2Q13823 731 aaKnown RBP16.69■□□□□ 0.26
RERE-202ENST00000377464 MIER1Q8N108 512 aa16.68■□□□□ 0.26
RERE-202ENST00000377464 PDE4CQ08493 712 aa16.68■□□□□ 0.26
RERE-202ENST00000377464 MTUS2Q5JR59 1369 aa16.67■□□□□ 0.26
RERE-202ENST00000377464 MSNP26038 577 aaKnown RBP16.67■□□□□ 0.26
RERE-202ENST00000377464 NUDCQ9Y266 331 aa16.66■□□□□ 0.26
RERE-202ENST00000377464 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
RERE-202ENST00000377464 POGKQ9P215 609 aa16.65■□□□□ 0.26
RERE-202ENST00000377464 CHMP7Q8WUX9 453 aaPredicted RBP16.64■□□□□ 0.26
RERE-202ENST00000377464 U2SURPO15042 1029 aaKnown RBP16.63■□□□□ 0.25
RERE-202ENST00000377464 CDCA8Q53HL2 280 aa16.63■□□□□ 0.25
RERE-202ENST00000377464 HSCBQ8IWL3 235 aa16.63■□□□□ 0.25
RERE-202ENST00000377464 SUPT16HQ9Y5B9 1047 aaKnown RBP16.63■□□□□ 0.25
RERE-202ENST00000377464 CHMP4BQ9H444 224 aaKnown RBP16.61■□□□□ 0.25
RERE-202ENST00000377464 MCCP23508 829 aa16.61■□□□□ 0.25
RERE-202ENST00000377464 SOX12O15370 315 aa16.59■□□□□ 0.25
RERE-202ENST00000377464 ARID3AQ99856 593 aa16.59■□□□□ 0.25
RERE-202ENST00000377464 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
RERE-202ENST00000377464 CC2D1BQ5T0F9 858 aaKnown RBP16.57■□□□□ 0.24
RERE-202ENST00000377464 NOP58Q9Y2X3 529 aaKnown RBP16.57■□□□□ 0.24
RERE-202ENST00000377464 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
RERE-202ENST00000377464 MS4A1P11836 297 aa16.54■□□□□ 0.24
RERE-202ENST00000377464 ANO8Q9HCE9 1232 aaPredicted RBP16.53■□□□□ 0.24
RERE-202ENST00000377464 APBB1O00213 710 aa16.51■□□□□ 0.23
RERE-202ENST00000377464 ZNF330Q9Y3S2 320 aaPredicted RBP16.5■□□□□ 0.23
RERE-202ENST00000377464 TNNT3P45378 269 aaPredicted RBP16.49■□□□□ 0.23
RERE-202ENST00000377464 TMX4Q9H1E5 349 aaPredicted RBP16.48■□□□□ 0.23
RERE-202ENST00000377464 HSP90B1P14625 803 aaKnown RBP16.48■□□□□ 0.23
RERE-202ENST00000377464 PLEKHD1A6NEE1 506 aa16.48■□□□□ 0.23
RERE-202ENST00000377464 KIAA1211Q6ZU35 1233 aa16.47■□□□□ 0.23
RERE-202ENST00000377464 PPP4R2Q9NY27 417 aa16.46■□□□□ 0.23
RERE-202ENST00000377464 CREBRFQ8IUR6 639 aa16.46■□□□□ 0.22
RERE-202ENST00000377464 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
RERE-202ENST00000377464 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
RERE-202ENST00000377464 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
RERE-202ENST00000377464 TPM4P67936 248 aa16.44■□□□□ 0.22
RERE-202ENST00000377464 B4GALNT3Q6L9W6 998 aa16.41■□□□□ 0.22
RERE-202ENST00000377464 KRI1Q8N9T8 703 aaKnown RBP16.41■□□□□ 0.22
RERE-202ENST00000377464 RASSF8Q8NHQ8 419 aa16.41■□□□□ 0.22
RERE-202ENST00000377464 G3V3G9 751 aa16.41■□□□□ 0.22
RERE-202ENST00000377464 DCAF8Q5TAQ9 597 aa16.41■□□□□ 0.22
RERE-202ENST00000377464 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.4■□□□□ 0.22
RERE-202ENST00000377464 SRPK2P78362 688 aaKnown RBP16.4■□□□□ 0.22
RERE-202ENST00000377464 VPS53Q5VIR6 699 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms