RNA–Protein interactions for RNA: ENST00000371459.5

SUPT3H-202, Transcript of SPT3 homolog, SAGA and STAGA complex component, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SUPT3H, Length 2,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3H-202ENST00000371459 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
SUPT3H-202ENST00000371459 TAOK2Q9UL54 1235 aa11.8□□□□□ -0.52
SUPT3H-202ENST00000371459 DCAF8Q5TAQ9 597 aa11.76□□□□□ -0.53
SUPT3H-202ENST00000371459 CREBZFQ9NS37 354 aa11.76□□□□□ -0.53
SUPT3H-202ENST00000371459 RIOK3O14730 519 aaKnown RBP11.73□□□□□ -0.53
SUPT3H-202ENST00000371459 PRR29P0C7W0 189 aa11.73□□□□□ -0.53
SUPT3H-202ENST00000371459 PRKCSHP14314 528 aaPredicted RBP11.72□□□□□ -0.53
SUPT3H-202ENST00000371459 MNX1P50219 401 aaPredicted RBP11.72□□□□□ -0.53
SUPT3H-202ENST00000371459 CLEC11AQ9Y240 323 aa11.72□□□□□ -0.53
SUPT3H-202ENST00000371459 FAM212AQ96EL1 285 aa11.71□□□□□ -0.53
SUPT3H-202ENST00000371459 REM2Q8IYK8 340 aaPredicted RBP11.7□□□□□ -0.54
SUPT3H-202ENST00000371459 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
SUPT3H-202ENST00000371459 VGFO15240 615 aaPredicted RBP11.66□□□□□ -0.54
SUPT3H-202ENST00000371459 NKX1-1Q15270 411 aaPredicted RBP11.65□□□□□ -0.54
SUPT3H-202ENST00000371459 SGIP1Q9BQI5 828 aa11.64□□□□□ -0.55
SUPT3H-202ENST00000371459 RASEFQ8IZ41 740 aa11.63□□□□□ -0.55
SUPT3H-202ENST00000371459 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
SUPT3H-202ENST00000371459 TPRNQ4KMQ1 711 aa11.61□□□□□ -0.55
SUPT3H-202ENST00000371459 STK25O00506 426 aa11.59□□□□□ -0.55
SUPT3H-202ENST00000371459 PITPNM1O00562 1244 aa11.55□□□□□ -0.56
SUPT3H-202ENST00000371459 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.53□□□□□ -0.56
SUPT3H-202ENST00000371459 NBR1Q14596 966 aa11.53□□□□□ -0.56
SUPT3H-202ENST00000371459 ZFP91Q96JP5 570 aaPredicted RBP11.53□□□□□ -0.56
SUPT3H-202ENST00000371459 BCL11BQ9C0K0 894 aaPredicted RBP11.51□□□□□ -0.57
SUPT3H-202ENST00000371459 PYGBP11216 843 aa11.51□□□□□ -0.57
SUPT3H-202ENST00000371459 RYDENQ9NUL5 291 aaKnown RBP11.51□□□□□ -0.57
SUPT3H-202ENST00000371459 STK24Q9Y6E0 443 aa11.51□□□□□ -0.57
SUPT3H-202ENST00000371459 ZNF467Q7Z7K2 595 aaPredicted RBP11.4□□□□□ -0.58
SUPT3H-202ENST00000371459 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
SUPT3H-202ENST00000371459 TSPYL2Q9H2G4 693 aaPredicted RBP11.37□□□□□ -0.59
SUPT3H-202ENST00000371459 FARP1Q9Y4F1 1045 aaPredicted RBP11.37□□□□□ -0.59
SUPT3H-202ENST00000371459 PDAP1Q13442 181 aaKnown RBP11.34□□□□□ -0.59
SUPT3H-202ENST00000371459 CCDC61Q9Y6R9 512 aa11.29□□□□□ -0.6
SUPT3H-202ENST00000371459 ZNF579Q8NAF0 562 aaKnown RBP11.29□□□□□ -0.6
SUPT3H-202ENST00000371459 P3H3Q8IVL6 736 aa11.28□□□□□ -0.6
SUPT3H-202ENST00000371459 PCDHB8Q9UN66 801 aa11.28□□□□□ -0.6
SUPT3H-202ENST00000371459 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
SUPT3H-202ENST00000371459 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
SUPT3H-202ENST00000371459 PSEN1P49768 467 aa11.26□□□□□ -0.61
SUPT3H-202ENST00000371459 FXR2P51116 673 aaKnown RBP eCLIP11.24□□□□□ -0.61
SUPT3H-202ENST00000371459 CADPS2Q86UW7 1296 aa11.24□□□□□ -0.61
SUPT3H-202ENST00000371459 MFRPQ9BY79 579 aa11.23□□□□□ -0.61
SUPT3H-202ENST00000371459 WDR70Q9NW82 654 aa11.21□□□□□ -0.61
SUPT3H-202ENST00000371459 PAK3O75914 559 aaPredicted RBP11.19□□□□□ -0.62
SUPT3H-202ENST00000371459 KCNV2Q8TDN2 545 aa11.16□□□□□ -0.62
SUPT3H-202ENST00000371459 IFNL1Q8IU54 200 aa11.16□□□□□ -0.62
SUPT3H-202ENST00000371459 KIF12Q96FN5 646 aa11.15□□□□□ -0.63
SUPT3H-202ENST00000371459 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
SUPT3H-202ENST00000371459 SOX12O15370 315 aa11.13□□□□□ -0.63
SUPT3H-202ENST00000371459 MAP3K13O43283 966 aa11.13□□□□□ -0.63
SUPT3H-202ENST00000371459 NLRP6P59044 892 aa11.13□□□□□ -0.63
SUPT3H-202ENST00000371459 EFCAB3Q8N7B9 438 aa11.12□□□□□ -0.63
SUPT3H-202ENST00000371459 PPP1R37O75864 691 aa11.1□□□□□ -0.63
SUPT3H-202ENST00000371459 CABP2Q9NPB3 220 aa11.1□□□□□ -0.63
SUPT3H-202ENST00000371459 PIP4P2Q8N4L2 257 aa11.08□□□□□ -0.64
SUPT3H-202ENST00000371459 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
SUPT3H-202ENST00000371459 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.07□□□□□ -0.64
SUPT3H-202ENST00000371459 CHRDL2Q6WN34 429 aa11.06□□□□□ -0.64
SUPT3H-202ENST00000371459 ARHGEF1Q92888 912 aaKnown RBP11.06□□□□□ -0.64
SUPT3H-202ENST00000371459 LMOD2Q6P5Q4 547 aa11.05□□□□□ -0.64
SUPT3H-202ENST00000371459 E2F4Q16254 413 aa11.02□□□□□ -0.64
SUPT3H-202ENST00000371459 ZRANB1Q9UGI0 708 aa11.01□□□□□ -0.65
SUPT3H-202ENST00000371459 TULP1O00294 542 aaPredicted RBP10.99□□□□□ -0.65
SUPT3H-202ENST00000371459 CD44P16070 742 aaKnown RBP10.98□□□□□ -0.65
SUPT3H-202ENST00000371459 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
SUPT3H-202ENST00000371459 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
SUPT3H-202ENST00000371459 NCKAP5LQ9HCH0 1330 aa10.96□□□□□ -0.65
SUPT3H-202ENST00000371459 TMEM132AQ24JP5 1023 aa10.96□□□□□ -0.66
SUPT3H-202ENST00000371459 PDE4AP27815 886 aa10.95□□□□□ -0.66
SUPT3H-202ENST00000371459 MFSD10Q14728 455 aa10.95□□□□□ -0.66
SUPT3H-202ENST00000371459 TESPA1A2RU30 521 aaPredicted RBP10.94□□□□□ -0.66
SUPT3H-202ENST00000371459 CRISPLD2Q9H0B8 497 aa10.93□□□□□ -0.66
SUPT3H-202ENST00000371459 LARP6Q9BRS8 491 aaKnown RBP10.92□□□□□ -0.66
SUPT3H-202ENST00000371459 GTF3C3Q9Y5Q9 886 aa10.92□□□□□ -0.66
SUPT3H-202ENST00000371459 TMEM106CQ9BVX2 250 aa10.91□□□□□ -0.66
SUPT3H-202ENST00000371459 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
SUPT3H-202ENST00000371459 ARIH1Q9Y4X5 557 aaPredicted RBP10.91□□□□□ -0.66
SUPT3H-202ENST00000371459 SEMA3EO15041 775 aa10.9□□□□□ -0.66
SUPT3H-202ENST00000371459 ZC3H15Q8WU90 426 aaKnown RBP10.89□□□□□ -0.67
SUPT3H-202ENST00000371459 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
SUPT3H-202ENST00000371459 MS4A3Q96HJ5 214 aa10.87□□□□□ -0.67
SUPT3H-202ENST00000371459 MKRN3Q13064 507 aaKnown RBP10.86□□□□□ -0.67
SUPT3H-202ENST00000371459 CAMK2BQ13554 666 aa10.86□□□□□ -0.67
SUPT3H-202ENST00000371459 TRPC6Q9Y210 931 aa10.86□□□□□ -0.67
SUPT3H-202ENST00000371459 SMYD5Q6GMV2 418 aa10.85□□□□□ -0.67
SUPT3H-202ENST00000371459 TIMELESSQ9UNS1 1208 aa10.84□□□□□ -0.67
SUPT3H-202ENST00000371459 C19orf67A6NJJ6 358 aa10.83□□□□□ -0.68
SUPT3H-202ENST00000371459 TIE1P35590 1138 aa10.83□□□□□ -0.68
SUPT3H-202ENST00000371459 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
SUPT3H-202ENST00000371459 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
SUPT3H-202ENST00000371459 BRPF1P55201 1214 aaPredicted RBP10.81□□□□□ -0.68
SUPT3H-202ENST00000371459 TTLL13PA6NNM8 815 aa10.77□□□□□ -0.69
SUPT3H-202ENST00000371459 ZMYND10O75800 440 aa10.77□□□□□ -0.69
SUPT3H-202ENST00000371459 SLC24A3Q9HC58 644 aa10.77□□□□□ -0.69
SUPT3H-202ENST00000371459 GPHNQ9NQX3 736 aaPredicted RBP10.75□□□□□ -0.69
SUPT3H-202ENST00000371459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.75□□□□□ -0.692e-6■■□□□ 13.3
SUPT3H-202ENST00000371459 PPP1R15BQ5SWA1 713 aa10.74□□□□□ -0.69
SUPT3H-202ENST00000371459 BMP2KQ9NSY1 1161 aaPredicted RBP10.74□□□□□ -0.69
SUPT3H-202ENST00000371459 NEUROD2Q15784 382 aa10.71□□□□□ -0.69
SUPT3H-202ENST00000371459 BARGINQ6ZT62 677 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms