RNA–Protein interactions for RNA: ENST00000370563.3

CLCA4-201, Transcript of chloride channel accessory 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCA4, Length 3,211 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA4-201ENST00000370563 ARID3AQ99856 593 aa5.73□□□□□ -1.49
CLCA4-201ENST00000370563 STAG3Q9UJ98 1225 aa5.73□□□□□ -1.49
CLCA4-201ENST00000370563 TRAIPQ9BWF2 469 aa5.72□□□□□ -1.49
CLCA4-201ENST00000370563 CCDC180Q9P1Z9 1646 aa5.71□□□□□ -1.49
CLCA4-201ENST00000370563 HMGB1P09429 215 aaKnown RBP5.71□□□□□ -1.49
CLCA4-201ENST00000370563 NEUROD2Q15784 382 aa5.7□□□□□ -1.5
CLCA4-201ENST00000370563 C1orf115Q9H7X2 142 aa5.7□□□□□ -1.5
CLCA4-201ENST00000370563 ZNF219Q9P2Y4 722 aaPredicted RBP5.7□□□□□ -1.5
CLCA4-201ENST00000370563 NECTIN2Q92692 538 aa5.69□□□□□ -1.5
CLCA4-201ENST00000370563 LMOD2Q6P5Q4 547 aa5.69□□□□□ -1.5
CLCA4-201ENST00000370563 GTPBP6O43824 516 aaPredicted RBP5.67□□□□□ -1.5
CLCA4-201ENST00000370563 ZBTB7CA1YPR0 619 aa5.67□□□□□ -1.5
CLCA4-201ENST00000370563 RYDENQ9NUL5 291 aaKnown RBP5.67□□□□□ -1.5
CLCA4-201ENST00000370563 MSH5O43196 834 aa5.67□□□□□ -1.5
CLCA4-201ENST00000370563 IGSF3O75054 1194 aa5.66□□□□□ -1.5
CLCA4-201ENST00000370563 MKRN4PQ13434 485 aaPredicted RBP5.66□□□□□ -1.5
CLCA4-201ENST00000370563 NISCHQ9Y2I1 1504 aa5.65□□□□□ -1.51
CLCA4-201ENST00000370563 KCTD17Q8N5Z5 321 aa5.64□□□□□ -1.51
CLCA4-201ENST00000370563 PUS7Q96PZ0 661 aaKnown RBP5.64□□□□□ -1.51
CLCA4-201ENST00000370563 PDIA4P13667 645 aaKnown RBP5.64□□□□□ -1.51
CLCA4-201ENST00000370563 NKX1-1Q15270 411 aaPredicted RBP5.63□□□□□ -1.51
CLCA4-201ENST00000370563 RGS22Q8NE09 1264 aa5.63□□□□□ -1.51
CLCA4-201ENST00000370563 ZC3H15Q8WU90 426 aaKnown RBP5.62□□□□□ -1.51
CLCA4-201ENST00000370563 SLC24A3Q9HC58 644 aa5.62□□□□□ -1.51
CLCA4-201ENST00000370563 ZMYND10O75800 440 aa5.61□□□□□ -1.51
CLCA4-201ENST00000370563 A6NJR5 290 aa5.61□□□□□ -1.51
CLCA4-201ENST00000370563 ARID3CA6NKF2 412 aa5.6□□□□□ -1.51
CLCA4-201ENST00000370563 ARIH1Q9Y4X5 557 aaPredicted RBP5.59□□□□□ -1.51
CLCA4-201ENST00000370563 CHRM1P11229 460 aaPredicted RBP5.58□□□□□ -1.52
CLCA4-201ENST00000370563 CDK11AQ9UQ88 783 aaPredicted RBP5.57□□□□□ -1.52
CLCA4-201ENST00000370563 ARHGEF1Q92888 912 aaKnown RBP5.57□□□□□ -1.52
CLCA4-201ENST00000370563 APBB1O00213 710 aa5.56□□□□□ -1.52
CLCA4-201ENST00000370563 FLIIQ13045 1269 aa5.56□□□□□ -1.52
CLCA4-201ENST00000370563 PATL2C9JE40 543 aaKnown RBP5.56□□□□□ -1.52
CLCA4-201ENST00000370563 HSP90B1P14625 803 aaKnown RBP5.56□□□□□ -1.52
CLCA4-201ENST00000370563 ZBTB47Q9UFB7 747 aaPredicted RBP5.56□□□□□ -1.52
CLCA4-201ENST00000370563 TESPA1A2RU30 521 aaPredicted RBP5.55□□□□□ -1.52
CLCA4-201ENST00000370563 BARGINQ6ZT62 677 aa5.55□□□□□ -1.52
CLCA4-201ENST00000370563 KCNV2Q8TDN2 545 aa5.55□□□□□ -1.52
CLCA4-201ENST00000370563 PLEKHG5O94827 1062 aa5.55□□□□□ -1.52
CLCA4-201ENST00000370563 GOPCQ9HD26 462 aa5.54□□□□□ -1.52
CLCA4-201ENST00000370563 CIZ1Q9ULV3 898 aaPredicted RBP5.54□□□□□ -1.52
CLCA4-201ENST00000370563 RAD21O60216 631 aa5.53□□□□□ -1.52
CLCA4-201ENST00000370563 CDK11BP21127 795 aaKnown RBP5.53□□□□□ -1.52
CLCA4-201ENST00000370563 PDE4CQ08493 712 aa5.52□□□□□ -1.53
CLCA4-201ENST00000370563 RNF25Q96BH1 459 aaPredicted RBP5.52□□□□□ -1.53
CLCA4-201ENST00000370563 AMOTL2Q9Y2J4 779 aa5.52□□□□□ -1.53
CLCA4-201ENST00000370563 GSE1Q14687 1217 aa5.52□□□□□ -1.53
CLCA4-201ENST00000370563 MYO15BQ96JP2 1530 aa5.51□□□□□ -1.53
CLCA4-201ENST00000370563 IL27Q8NEV9 243 aa5.51□□□□□ -1.53
CLCA4-201ENST00000370563 ZNF428Q96B54 188 aa5.51□□□□□ -1.53
CLCA4-201ENST00000370563 U3KPZ7 1027 aaPredicted RBP5.51□□□□□ -1.53
CLCA4-201ENST00000370563 MTMR7Q9Y216 660 aa5.5□□□□□ -1.53
CLCA4-201ENST00000370563 ONECUT3O60422 494 aaPredicted RBP5.5□□□□□ -1.53
CLCA4-201ENST00000370563 MKRN3Q13064 507 aaKnown RBP5.5□□□□□ -1.53
CLCA4-201ENST00000370563 AK7Q96M32 723 aa5.5□□□□□ -1.53
CLCA4-201ENST00000370563 CHMP4AQ9BY43 222 aa5.5□□□□□ -1.53
CLCA4-201ENST00000370563 GPBP1L1Q9HC44 474 aaPredicted RBP5.5□□□□□ -1.53
CLCA4-201ENST00000370563 CANXP27824 592 aaKnown RBP5.49□□□□□ -1.53
CLCA4-201ENST00000370563 RIOK3O14730 519 aaKnown RBP5.48□□□□□ -1.53
CLCA4-201ENST00000370563 PLCD3Q8N3E9 789 aa5.48□□□□□ -1.53
CLCA4-201ENST00000370563 CCDC82Q8N4S0 544 aa5.48□□□□□ -1.53
CLCA4-201ENST00000370563 VGFO15240 615 aaPredicted RBP5.47□□□□□ -1.53
CLCA4-201ENST00000370563 FOXD4L5Q5VV16 416 aaPredicted RBP5.47□□□□□ -1.53
CLCA4-201ENST00000370563 FOXD4L4Q8WXT5 416 aaPredicted RBP5.47□□□□□ -1.53
CLCA4-201ENST00000370563 SMYD5Q6GMV2 418 aa5.46□□□□□ -1.54
CLCA4-201ENST00000370563 TRAK2O60296 914 aa5.46□□□□□ -1.54
CLCA4-201ENST00000370563 RBM25P49756 843 aaKnown RBP5.46□□□□□ -1.54
CLCA4-201ENST00000370563 ZBTB12Q9Y330 459 aaPredicted RBP5.46□□□□□ -1.54
CLCA4-201ENST00000370563 AEBP1Q8IUX7 1158 aa5.45□□□□□ -1.54
CLCA4-201ENST00000370563 IGSF5Q9NSI5 407 aa5.44□□□□□ -1.54
CLCA4-201ENST00000370563 POLA2Q14181 598 aa5.43□□□□□ -1.54
CLCA4-201ENST00000370563 CADPS2Q86UW7 1296 aa5.43□□□□□ -1.54
CLCA4-201ENST00000370563 WDR70Q9NW82 654 aa5.43□□□□□ -1.54
CLCA4-201ENST00000370563 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.42□□□□□ -1.54
CLCA4-201ENST00000370563 MFAP1P55081 439 aaKnown RBP5.42□□□□□ -1.54
CLCA4-201ENST00000370563 MIER1Q8N108 512 aa5.42□□□□□ -1.54
CLCA4-201ENST00000370563 SERPINA10Q9UK55 444 aa5.42□□□□□ -1.54
CLCA4-201ENST00000370563 TMCO4Q5TGY1 634 aa5.42□□□□□ -1.54
CLCA4-201ENST00000370563 SEMA3EO15041 775 aa5.41□□□□□ -1.54
CLCA4-201ENST00000370563 KDM4CQ9H3R0 1056 aa5.41□□□□□ -1.54
CLCA4-201ENST00000370563 STK25O00506 426 aa5.4□□□□□ -1.54
CLCA4-201ENST00000370563 KCNA1Q09470 495 aa5.4□□□□□ -1.54
CLCA4-201ENST00000370563 SSUH2Q9Y2M2 353 aa5.4□□□□□ -1.54
CLCA4-201ENST00000370563 RSPH4AQ5TD94 716 aa5.4□□□□□ -1.55
CLCA4-201ENST00000370563 GZF1Q9H116 711 aaPredicted RBP5.4□□□□□ -1.55
CLCA4-201ENST00000370563 SOCS7O14512 581 aa5.39□□□□□ -1.55
CLCA4-201ENST00000370563 FNBP4Q8N3X1 1017 aaPredicted RBP5.39□□□□□ -1.55
CLCA4-201ENST00000370563 PPP1R15AO75807 674 aaPredicted RBP5.39□□□□□ -1.55
CLCA4-201ENST00000370563 CLUAP1Q96AJ1 413 aa5.38□□□□□ -1.55
CLCA4-201ENST00000370563 NUBP1P53384 320 aa5.36□□□□□ -1.55
CLCA4-201ENST00000370563 E9PSI1 815 aa5.36□□□□□ -1.55
CLCA4-201ENST00000370563 RB1CC1Q8TDY2 1594 aa5.35□□□□□ -1.55
CLCA4-201ENST00000370563 TRIM66O15016 1216 aa5.35□□□□□ -1.55
CLCA4-201ENST00000370563 MFSD10Q14728 455 aa5.35□□□□□ -1.55
CLCA4-201ENST00000370563 DDRGK1Q96HY6 314 aa5.35□□□□□ -1.55
CLCA4-201ENST00000370563 CUX2O14529 1486 aa5.35□□□□□ -1.55
CLCA4-201ENST00000370563 NACADO15069 1562 aa5.34□□□□□ -1.55
CLCA4-201ENST00000370563 USP35Q9P2H5 1018 aa5.34□□□□□ -1.55
CLCA4-201ENST00000370563 FAM117AQ9C073 453 aa5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms