RNA–Protein interactions for RNA: ENST00000370203.8

TMEM56-201, Transcript of transmembrane protein 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM56, Length 6,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-201ENST00000370203 PPP1R15AO75807 674 aaPredicted RBP16.86■□□□□ 0.29
TMEM56-201ENST00000370203 CHMP7Q8WUX9 453 aaPredicted RBP16.86■□□□□ 0.29
TMEM56-201ENST00000370203 UPF2Q9HAU5 1272 aaKnown RBP16.86■□□□□ 0.29
TMEM56-201ENST00000370203 HAP1P54257 671 aaPredicted RBP16.85■□□□□ 0.29
TMEM56-201ENST00000370203 CCDC136Q96JN2 1154 aa16.84■□□□□ 0.29
TMEM56-201ENST00000370203 MRS2Q9HD23 443 aa16.82■□□□□ 0.28
TMEM56-201ENST00000370203 LMOD2Q6P5Q4 547 aa16.81■□□□□ 0.28
TMEM56-201ENST00000370203 TSPY4P0CV99 314 aa16.78■□□□□ 0.28
TMEM56-201ENST00000370203 TSPY10P0CW01 314 aa16.78■□□□□ 0.28
TMEM56-201ENST00000370203 LAS1LQ9Y4W2 734 aaKnown RBP16.75■□□□□ 0.27
TMEM56-201ENST00000370203 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
TMEM56-201ENST00000370203 TNNT2P45379 298 aaPredicted RBP16.73■□□□□ 0.27
TMEM56-201ENST00000370203 NEUROD2Q15784 382 aa16.73■□□□□ 0.27
TMEM56-201ENST00000370203 MTUS2Q5JR59 1369 aa16.7■□□□□ 0.26
TMEM56-201ENST00000370203 MYH16Q9H6N6 1097 aa16.69■□□□□ 0.26
TMEM56-201ENST00000370203 MIER1Q8N108 512 aa16.68■□□□□ 0.26
TMEM56-201ENST00000370203 SOX12O15370 315 aa16.67■□□□□ 0.26
TMEM56-201ENST00000370203 NPHP1O15259 732 aa16.63■□□□□ 0.25
TMEM56-201ENST00000370203 MLECQ14165 292 aa16.63■□□□□ 0.25
TMEM56-201ENST00000370203 NCLP19338 710 aaKnown RBP16.63■□□□□ 0.25
TMEM56-201ENST00000370203 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
TMEM56-201ENST00000370203 TRHP20396 242 aaPredicted RBP16.62■□□□□ 0.25
TMEM56-201ENST00000370203 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
TMEM56-201ENST00000370203 CC2D1BQ5T0F9 858 aaKnown RBP16.55■□□□□ 0.24
TMEM56-201ENST00000370203 SAFB2Q14151 953 aaKnown RBP eCLIP16.55■□□□□ 0.24
TMEM56-201ENST00000370203 EIF4G2P78344 907 aaKnown RBP eCLIP16.53■□□□□ 0.24
TMEM56-201ENST00000370203 AMER1Q5JTC6 1135 aaPredicted RBP16.52■□□□□ 0.24
TMEM56-201ENST00000370203 PLEKHD1A6NEE1 506 aa16.52■□□□□ 0.23
TMEM56-201ENST00000370203 FRAT1Q92837 279 aaPredicted RBP16.51■□□□□ 0.23
TMEM56-201ENST00000370203 POGKQ9P215 609 aa16.5■□□□□ 0.23
TMEM56-201ENST00000370203 NAP1L2Q9ULW6 460 aaPredicted RBP16.49■□□□□ 0.23
TMEM56-201ENST00000370203 FTSJ3Q8IY81 847 aaKnown RBP16.48■□□□□ 0.23
TMEM56-201ENST00000370203 U2SURPO15042 1029 aaKnown RBP16.47■□□□□ 0.23
TMEM56-201ENST00000370203 CARD11Q9BXL7 1154 aa16.47■□□□□ 0.23
TMEM56-201ENST00000370203 ZCCHC6Q5VYS8 1495 aaKnown RBP16.46■□□□□ 0.23
TMEM56-201ENST00000370203 KNSTRNQ9Y448 316 aa16.46■□□□□ 0.23
TMEM56-201ENST00000370203 RGS3P49796 1198 aa16.45■□□□□ 0.22
TMEM56-201ENST00000370203 SIN3AQ96ST3 1273 aa16.45■□□□□ 0.22
TMEM56-201ENST00000370203 CFDP1Q9UEE9 299 aaPredicted RBP16.45■□□□□ 0.22
TMEM56-201ENST00000370203 SUPT16HQ9Y5B9 1047 aaKnown RBP16.45■□□□□ 0.22
TMEM56-201ENST00000370203 PLCB2Q00722 1185 aa16.44■□□□□ 0.22
TMEM56-201ENST00000370203 CLIP1P30622 1438 aa16.43■□□□□ 0.22
TMEM56-201ENST00000370203 OS9Q13438 667 aaPredicted RBP16.42■□□□□ 0.22
TMEM56-201ENST00000370203 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
TMEM56-201ENST00000370203 RTN4Q9NQC3 1192 aaKnown RBP16.4■□□□□ 0.22
TMEM56-201ENST00000370203 SPRYD3Q8NCJ5 442 aa16.4■□□□□ 0.22
TMEM56-201ENST00000370203 MAPK8IP3Q9UPT6 1336 aa16.4■□□□□ 0.22
TMEM56-201ENST00000370203 STK26Q9P289 416 aa16.38■□□□□ 0.21
TMEM56-201ENST00000370203 PTMAP06454 111 aaKnown RBP16.38■□□□□ 0.21
TMEM56-201ENST00000370203 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
TMEM56-201ENST00000370203 CLSTN1O94985 981 aa16.37■□□□□ 0.21
TMEM56-201ENST00000370203 ZNF330Q9Y3S2 320 aaPredicted RBP16.37■□□□□ 0.21
TMEM56-201ENST00000370203 ZRSR1Q15695 479 aaKnown RBP16.36■□□□□ 0.21
TMEM56-201ENST00000370203 APBB1O00213 710 aa16.35■□□□□ 0.21
TMEM56-201ENST00000370203 TRIM44Q96DX7 344 aaPredicted RBP16.35■□□□□ 0.21
TMEM56-201ENST00000370203 BECN1Q14457 450 aa16.34■□□□□ 0.21
TMEM56-201ENST00000370203 ERCC6Q03468 1493 aa16.34■□□□□ 0.21
TMEM56-201ENST00000370203 GOLGA2Q08379 1002 aa16.33■□□□□ 0.21
TMEM56-201ENST00000370203 DNTTIP2Q5QJE6 756 aaKnown RBP16.33■□□□□ 0.2
TMEM56-201ENST00000370203 CASC1Q6TDU7 716 aa16.33■□□□□ 0.2
TMEM56-201ENST00000370203 FGD1P98174 961 aa16.32■□□□□ 0.2
TMEM56-201ENST00000370203 PAK3O75914 559 aaPredicted RBP16.31■□□□□ 0.2
TMEM56-201ENST00000370203 SRPK2P78362 688 aaKnown RBP16.31■□□□□ 0.2
TMEM56-201ENST00000370203 FOXD1Q16676 465 aa16.3■□□□□ 0.2
TMEM56-201ENST00000370203 KCNJ4P48050 445 aa16.3■□□□□ 0.2
TMEM56-201ENST00000370203 EIF4G1Q04637 1599 aaKnown RBP16.3■□□□□ 0.2
TMEM56-201ENST00000370203 DCAF11Q8TEB1 546 aa16.29■□□□□ 0.2
TMEM56-201ENST00000370203 NUTM2DQ5VT03 806 aaPredicted RBP16.29■□□□□ 0.2
TMEM56-201ENST00000370203 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
TMEM56-201ENST00000370203 GGT6Q6P531 493 aa16.28■□□□□ 0.2
TMEM56-201ENST00000370203 GOLGA6L22H0YM25 854 aa16.27■□□□□ 0.19
TMEM56-201ENST00000370203 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
TMEM56-201ENST00000370203 B4GALNT3Q6L9W6 998 aa16.25■□□□□ 0.19
TMEM56-201ENST00000370203 DDRGK1Q96HY6 314 aa16.25■□□□□ 0.19
TMEM56-201ENST00000370203 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
TMEM56-201ENST00000370203 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
TMEM56-201ENST00000370203 CEP162Q5TB80 1403 aa16.24■□□□□ 0.19
TMEM56-201ENST00000370203 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
TMEM56-201ENST00000370203 GLIPR1L2Q4G1C9 344 aa16.23■□□□□ 0.19
TMEM56-201ENST00000370203 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
TMEM56-201ENST00000370203 DCAF1Q9Y4B6 1507 aa16.21■□□□□ 0.19
TMEM56-201ENST00000370203 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
TMEM56-201ENST00000370203 CDCA8Q53HL2 280 aa16.19■□□□□ 0.18
TMEM56-201ENST00000370203 NUTM2FA1L443 756 aa16.19■□□□□ 0.18
TMEM56-201ENST00000370203 CSB-PGBD3P0DP91 1061 aa16.19■□□□□ 0.18
TMEM56-201ENST00000370203 ERICH6BQ5W0A0 696 aa16.16■□□□□ 0.18
TMEM56-201ENST00000370203 NAP1L5Q96NT1 182 aaPredicted RBP16.16■□□□□ 0.18
TMEM56-201ENST00000370203 MORC1Q86VD1 984 aa16.15■□□□□ 0.18
TMEM56-201ENST00000370203 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
TMEM56-201ENST00000370203 PDE4CQ08493 712 aa16.13■□□□□ 0.17
TMEM56-201ENST00000370203 CCNB3Q8WWL7 1395 aa16.11■□□□□ 0.17
TMEM56-201ENST00000370203 RTF1Q92541 710 aaKnown RBP16.11■□□□□ 0.17
TMEM56-201ENST00000370203 CHMP3Q9Y3E7 222 aa16.11■□□□□ 0.17
TMEM56-201ENST00000370203 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
TMEM56-201ENST00000370203 ARID3AQ99856 593 aa16.1■□□□□ 0.17
TMEM56-201ENST00000370203 TMF1P82094 1093 aa16.1■□□□□ 0.17
TMEM56-201ENST00000370203 WRNQ14191 1432 aaPredicted RBP eCLIP16.08■□□□□ 0.17
TMEM56-201ENST00000370203 LTV1Q96GA3 475 aaPredicted RBP16.08■□□□□ 0.17
TMEM56-201ENST00000370203 GOLGA6L4A6NEF3 574 aa16.06■□□□□ 0.16
TMEM56-201ENST00000370203 GNL2Q13823 731 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms