RNA–Protein interactions for RNA: ENST00000369144.7

EIF3A-201, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3A, Length 6,646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-201ENST00000369144 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
EIF3A-201ENST00000369144 TNNT2P45379 298 aaPredicted RBP16.84■□□□□ 0.29
EIF3A-201ENST00000369144 ZRSR1Q15695 479 aaKnown RBP16.83■□□□□ 0.29
EIF3A-201ENST00000369144 TONSLQ96HA7 1378 aa16.82■□□□□ 0.28
EIF3A-201ENST00000369144 PLCB2Q00722 1185 aa16.82■□□□□ 0.28
EIF3A-201ENST00000369144 HIRIP3Q9BW71 556 aaPredicted RBP16.79■□□□□ 0.28
EIF3A-201ENST00000369144 NAP1L5Q96NT1 182 aaPredicted RBP16.78■□□□□ 0.28
EIF3A-201ENST00000369144 CHIC2Q9UKJ5 165 aa16.78■□□□□ 0.28
EIF3A-201ENST00000369144 CLSTN1O94985 981 aa16.75■□□□□ 0.27
EIF3A-201ENST00000369144 MRS2Q9HD23 443 aa16.74■□□□□ 0.27
EIF3A-201ENST00000369144 BECN1Q14457 450 aa16.72■□□□□ 0.27
EIF3A-201ENST00000369144 GOLGA6L22H0YM25 854 aa16.72■□□□□ 0.27
EIF3A-201ENST00000369144 HAP1P54257 671 aaPredicted RBP16.72■□□□□ 0.27
EIF3A-201ENST00000369144 NPHP1O15259 732 aa16.68■□□□□ 0.26
EIF3A-201ENST00000369144 NAP1L2Q9ULW6 460 aaPredicted RBP16.68■□□□□ 0.26
EIF3A-201ENST00000369144 PPM1GO15355 546 aaPredicted RBP16.67■□□□□ 0.26
EIF3A-201ENST00000369144 LAS1LQ9Y4W2 734 aaKnown RBP16.67■□□□□ 0.26
EIF3A-201ENST00000369144 DDRGK1Q96HY6 314 aa16.65■□□□□ 0.26
EIF3A-201ENST00000369144 ARID4BQ4LE39 1312 aaPredicted RBP16.65■□□□□ 0.26
EIF3A-201ENST00000369144 NPM1P06748 294 aaKnown RBP eCLIP16.63■□□□□ 0.251e-6■■□□□ 13.4
EIF3A-201ENST00000369144 CASC1Q6TDU7 716 aa16.6■□□□□ 0.25
EIF3A-201ENST00000369144 PPP1R15AO75807 674 aaPredicted RBP16.58■□□□□ 0.24
EIF3A-201ENST00000369144 ARID3AQ99856 593 aa16.57■□□□□ 0.24
EIF3A-201ENST00000369144 NEUROD2Q15784 382 aa16.57■□□□□ 0.24
EIF3A-201ENST00000369144 LMOD2Q6P5Q4 547 aa16.56■□□□□ 0.24
EIF3A-201ENST00000369144 FGD1P98174 961 aa16.55■□□□□ 0.24
EIF3A-201ENST00000369144 ERICH6BQ5W0A0 696 aa16.55■□□□□ 0.24
EIF3A-201ENST00000369144 FTSJ3Q8IY81 847 aaKnown RBP16.55■□□□□ 0.24
EIF3A-201ENST00000369144 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
EIF3A-201ENST00000369144 PRM3Q9NNZ6 103 aa16.54■□□□□ 0.24
EIF3A-201ENST00000369144 SPRYD3Q8NCJ5 442 aa16.52■□□□□ 0.24
EIF3A-201ENST00000369144 PDE4CQ08493 712 aa16.52■□□□□ 0.23
EIF3A-201ENST00000369144 GOLGA6L6A8MZA4 724 aa16.51■□□□□ 0.23
EIF3A-201ENST00000369144 RGS3P49796 1198 aa16.51■□□□□ 0.23
EIF3A-201ENST00000369144 OS9Q13438 667 aaPredicted RBP16.51■□□□□ 0.23
EIF3A-201ENST00000369144 ANP32EQ9BTT0 268 aa16.51■□□□□ 0.23
EIF3A-201ENST00000369144 HSP90AB1P08238 724 aaKnown RBP16.5■□□□□ 0.23
EIF3A-201ENST00000369144 MIER1Q8N108 512 aa16.49■□□□□ 0.23
EIF3A-201ENST00000369144 KCNJ4P48050 445 aa16.48■□□□□ 0.23
EIF3A-201ENST00000369144 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
EIF3A-201ENST00000369144 DRC7Q8IY82 874 aa16.47■□□□□ 0.23
EIF3A-201ENST00000369144 RGL3Q3MIN7 710 aa16.47■□□□□ 0.23
EIF3A-201ENST00000369144 ANO8Q9HCE9 1232 aaPredicted RBP16.46■□□□□ 0.23
EIF3A-201ENST00000369144 FRAT1Q92837 279 aaPredicted RBP16.46■□□□□ 0.23
EIF3A-201ENST00000369144 ABCC9O60706 1549 aa16.42■□□□□ 0.22
EIF3A-201ENST00000369144 SUPT16HQ9Y5B9 1047 aaKnown RBP16.41■□□□□ 0.22
EIF3A-201ENST00000369144 CSRNP3Q8WYN3 585 aa16.41■□□□□ 0.22
EIF3A-201ENST00000369144 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
EIF3A-201ENST00000369144 TSPY4P0CV99 314 aa16.39■□□□□ 0.21
EIF3A-201ENST00000369144 TSPY10P0CW01 314 aa16.39■□□□□ 0.21
EIF3A-201ENST00000369144 RRP7BPQ9NSQ0 103 aa16.39■□□□□ 0.21
EIF3A-201ENST00000369144 NOC3LQ8WTT2 800 aaKnown RBP16.38■□□□□ 0.21
EIF3A-201ENST00000369144 CHAF1AQ13111 956 aaPredicted RBP16.38■□□□□ 0.21
EIF3A-201ENST00000369144 KCNH8Q96L42 1107 aa16.38■□□□□ 0.21
EIF3A-201ENST00000369144 CFAP53Q96M91 514 aa16.38■□□□□ 0.21
EIF3A-201ENST00000369144 PNNQ9H307 717 aaKnown RBP16.37■□□□□ 0.21
EIF3A-201ENST00000369144 SOX12O15370 315 aa16.36■□□□□ 0.21
EIF3A-201ENST00000369144 NRDCO43847 1150 aa16.36■□□□□ 0.21
EIF3A-201ENST00000369144 MSNP26038 577 aaKnown RBP16.35■□□□□ 0.21
EIF3A-201ENST00000369144 MAPK8IP3Q9UPT6 1336 aa16.34■□□□□ 0.21
EIF3A-201ENST00000369144 FBXO3Q9UK99 471 aa16.33■□□□□ 0.21
EIF3A-201ENST00000369144 EIF4G2P78344 907 aaKnown RBP eCLIP16.33■□□□□ 0.22e-13■□□□□ 10.3
EIF3A-201ENST00000369144 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
EIF3A-201ENST00000369144 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
EIF3A-201ENST00000369144 U2SURPO15042 1029 aaKnown RBP16.3■□□□□ 0.2
EIF3A-201ENST00000369144 APBB1O00213 710 aa16.3■□□□□ 0.2
EIF3A-201ENST00000369144 NOP58Q9Y2X3 529 aaKnown RBP16.3■□□□□ 0.2
EIF3A-201ENST00000369144 CC2D1BQ5T0F9 858 aaKnown RBP16.3■□□□□ 0.2
EIF3A-201ENST00000369144 KIAA2012Q0VF49 1180 aa16.28■□□□□ 0.2
EIF3A-201ENST00000369144 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.27■□□□□ 0.2
EIF3A-201ENST00000369144 HSCBQ8IWL3 235 aa16.27■□□□□ 0.19
EIF3A-201ENST00000369144 A0A0U1RQG5 324 aaPredicted RBP16.25■□□□□ 0.19
EIF3A-201ENST00000369144 GZF1Q9H116 711 aaPredicted RBP16.24■□□□□ 0.19
EIF3A-201ENST00000369144 B4GALNT3Q6L9W6 998 aa16.24■□□□□ 0.19
EIF3A-201ENST00000369144 POGKQ9P215 609 aa16.23■□□□□ 0.19
EIF3A-201ENST00000369144 CREBRFQ8IUR6 639 aa16.23■□□□□ 0.19
EIF3A-201ENST00000369144 TNNT3P45378 269 aaPredicted RBP16.22■□□□□ 0.19
EIF3A-201ENST00000369144 ZNF330Q9Y3S2 320 aaPredicted RBP16.22■□□□□ 0.19
EIF3A-201ENST00000369144 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
EIF3A-201ENST00000369144 HSP90B1P14625 803 aaKnown RBP16.19■□□□□ 0.18
EIF3A-201ENST00000369144 L1TD1Q5T7N2 865 aaKnown RBP16.19■□□□□ 0.18
EIF3A-201ENST00000369144 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
EIF3A-201ENST00000369144 DEKP35659 375 aaKnown RBP16.17■□□□□ 0.18
EIF3A-201ENST00000369144 WWC1Q8IX03 1113 aa16.17■□□□□ 0.18
EIF3A-201ENST00000369144 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
EIF3A-201ENST00000369144 MCCP23508 829 aa16.16■□□□□ 0.18
EIF3A-201ENST00000369144 PATL2C9JE40 543 aaKnown RBP16.14■□□□□ 0.17
EIF3A-201ENST00000369144 CHMP7Q8WUX9 453 aaPredicted RBP16.14■□□□□ 0.17
EIF3A-201ENST00000369144 SAFB2Q14151 953 aaKnown RBP eCLIP16.13■□□□□ 0.17
EIF3A-201ENST00000369144 PPP4R2Q9NY27 417 aa16.11■□□□□ 0.17
EIF3A-201ENST00000369144 NOL8Q76FK4 1167 aaKnown RBP16.09■□□□□ 0.17
EIF3A-201ENST00000369144 FOXD4L1Q9NU39 408 aa16.08■□□□□ 0.17
EIF3A-201ENST00000369144 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
EIF3A-201ENST00000369144 VPS53Q5VIR6 699 aa16.07■□□□□ 0.16
EIF3A-201ENST00000369144 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
EIF3A-201ENST00000369144 SLKQ9H2G2 1235 aaPredicted RBP16.07■□□□□ 0.16
EIF3A-201ENST00000369144 GOLGA6L1Q8N7Z2 621 aa16.07■□□□□ 0.16
EIF3A-201ENST00000369144 RASSF8Q8NHQ8 419 aa16.06■□□□□ 0.16
EIF3A-201ENST00000369144 CHMP3Q9Y3E7 222 aa16.06■□□□□ 0.16
EIF3A-201ENST00000369144 MLECQ14165 292 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms