RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 MS4A3Q96HJ5 214 aa14.58□□□□□ -0.08
PTPRK-202ENST00000368205 RASEFQ8IZ41 740 aa14.57□□□□□ -0.08
PTPRK-202ENST00000368205 FBXO3Q9UK99 471 aa14.55□□□□□ -0.08
PTPRK-202ENST00000368205 KIF12Q96FN5 646 aa14.52□□□□□ -0.09
PTPRK-202ENST00000368205 NUBP1P53384 320 aa14.5□□□□□ -0.09
PTPRK-202ENST00000368205 ASTLQ6HA08 431 aaPredicted RBP14.49□□□□□ -0.09
PTPRK-202ENST00000368205 ATMINO43313 823 aaPredicted RBP14.44□□□□□ -0.1
PTPRK-202ENST00000368205 PELP1Q8IZL8 1130 aaKnown RBP14.44□□□□□ -0.1
PTPRK-202ENST00000368205 MAP3K13O43283 966 aa14.42□□□□□ -0.1
PTPRK-202ENST00000368205 FAM212AQ96EL1 285 aa14.38□□□□□ -0.11
PTPRK-202ENST00000368205 SGIP1Q9BQI5 828 aa14.38□□□□□ -0.11
PTPRK-202ENST00000368205 VASPP50552 380 aaPredicted RBP14.35□□□□□ -0.11
PTPRK-202ENST00000368205 SLC39A7Q92504 469 aa14.35□□□□□ -0.11
PTPRK-202ENST00000368205 C7P10643 843 aa14.34□□□□□ -0.11
PTPRK-202ENST00000368205 TIE1P35590 1138 aa14.34□□□□□ -0.11
PTPRK-202ENST00000368205 BMP2KQ9NSY1 1161 aaPredicted RBP14.33□□□□□ -0.12
PTPRK-202ENST00000368205 METRNQ9UJH8 293 aa14.33□□□□□ -0.12
PTPRK-202ENST00000368205 TRPC6Q9Y210 931 aa14.33□□□□□ -0.12
PTPRK-202ENST00000368205 POTEB2H3BUK9 544 aa14.32□□□□□ -0.12
PTPRK-202ENST00000368205 ATN1P54259 1190 aaPredicted RBP14.32□□□□□ -0.12
PTPRK-202ENST00000368205 PCDHB13Q9Y5F0 798 aa14.29□□□□□ -0.12
PTPRK-202ENST00000368205 DCAF8Q5TAQ9 597 aa14.24□□□□□ -0.13
PTPRK-202ENST00000368205 OTUD5Q96G74 571 aa14.24□□□□□ -0.13
PTPRK-202ENST00000368205 TTLL13PA6NNM8 815 aa14.23□□□□□ -0.13
PTPRK-202ENST00000368205 IFNL1Q8IU54 200 aa14.22□□□□□ -0.13
PTPRK-202ENST00000368205 KLHL34Q8N239 644 aa14.21□□□□□ -0.13
PTPRK-202ENST00000368205 PYGBP11216 843 aa14.15□□□□□ -0.14
PTPRK-202ENST00000368205 GSE1Q14687 1217 aa14.15□□□□□ -0.14
PTPRK-202ENST00000368205 POTEFA5A3E0 1075 aa14.14□□□□□ -0.15
PTPRK-202ENST00000368205 POTEJP0CG39 1038 aa14.14□□□□□ -0.15
PTPRK-202ENST00000368205 TRIM35Q9UPQ4 493 aa14.13□□□□□ -0.15
PTPRK-202ENST00000368205 IER5LQ5T953 404 aa14.12□□□□□ -0.15
PTPRK-202ENST00000368205 MAMSTRQ6ZN01 415 aa14.11□□□□□ -0.15
PTPRK-202ENST00000368205 IFNLR1Q8IU57 520 aaPredicted RBP14.09□□□□□ -0.15
PTPRK-202ENST00000368205 TMEM106CQ9BVX2 250 aa14.09□□□□□ -0.15
PTPRK-202ENST00000368205 CHRM1P11229 460 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-202ENST00000368205 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
PTPRK-202ENST00000368205 COLQQ9Y215 455 aaPredicted RBP14.05□□□□□ -0.16
PTPRK-202ENST00000368205 SEC24BO95487 1268 aa14.04□□□□□ -0.16
PTPRK-202ENST00000368205 PCDHB8Q9UN66 801 aa14.03□□□□□ -0.16
PTPRK-202ENST00000368205 SCUBE2Q9NQ36 999 aa14.02□□□□□ -0.17
PTPRK-202ENST00000368205 ZNF467Q7Z7K2 595 aaPredicted RBP14.01□□□□□ -0.17
PTPRK-202ENST00000368205 IRX5P78411 483 aaPredicted RBP13.94□□□□□ -0.18
PTPRK-202ENST00000368205 PLCG2P16885 1265 aa13.91□□□□□ -0.18
PTPRK-202ENST00000368205 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
PTPRK-202ENST00000368205 OCEL1Q9H607 264 aa13.87□□□□□ -0.19
PTPRK-202ENST00000368205 PSEN1P49768 467 aa13.85□□□□□ -0.19
PTPRK-202ENST00000368205 PDAP1Q13442 181 aaKnown RBP13.82□□□□□ -0.2
PTPRK-202ENST00000368205 TRIM41Q8WV44 630 aa13.82□□□□□ -0.2
PTPRK-202ENST00000368205 POTEMA6NI47 508 aa13.79□□□□□ -0.2
PTPRK-202ENST00000368205 GOLGA2Q08379 1002 aa13.79□□□□□ -0.2
PTPRK-202ENST00000368205 MKRN3Q13064 507 aaKnown RBP13.78□□□□□ -0.2
PTPRK-202ENST00000368205 LCE2DQ5TA82 110 aaPredicted RBP13.77□□□□□ -0.21
PTPRK-202ENST00000368205 POTEGQ6S5H5 508 aa13.76□□□□□ -0.21
PTPRK-202ENST00000368205 PDCD7Q8N8D1 485 aaKnown RBP13.76□□□□□ -0.21
PTPRK-202ENST00000368205 SLAIN1Q8ND83 568 aa13.73□□□□□ -0.21
PTPRK-202ENST00000368205 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-202ENST00000368205 ILDR1Q86SU0 546 aaPredicted RBP13.71□□□□□ -0.21
PTPRK-202ENST00000368205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.69□□□□□ -0.221e-11■■□□□ 11.8
PTPRK-202ENST00000368205 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
PTPRK-202ENST00000368205 L3MBTL3Q96JM7 780 aaPredicted RBP13.66□□□□□ -0.22
PTPRK-202ENST00000368205 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.66□□□□□ -0.22
PTPRK-202ENST00000368205 PCDH10Q9P2E7 1040 aa13.63□□□□□ -0.23
PTPRK-202ENST00000368205 RNF25Q96BH1 459 aaPredicted RBP13.59□□□□□ -0.23
PTPRK-202ENST00000368205 RIOK3O14730 519 aaKnown RBP13.58□□□□□ -0.24
PTPRK-202ENST00000368205 C3orf67Q6ZVT6 689 aa13.58□□□□□ -0.24
PTPRK-202ENST00000368205 SNPHO15079 494 aa13.55□□□□□ -0.24
PTPRK-202ENST00000368205 ST18O60284 1047 aa13.55□□□□□ -0.24
PTPRK-202ENST00000368205 DPY19L2Q6NUT2 758 aa13.54□□□□□ -0.24
PTPRK-202ENST00000368205 PLSCR2Q9NRY7 297 aa13.54□□□□□ -0.24
PTPRK-202ENST00000368205 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-202ENST00000368205 EFCAB3Q8N7B9 438 aa13.52□□□□□ -0.25
PTPRK-202ENST00000368205 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.49□□□□□ -0.25
PTPRK-202ENST00000368205 ZFP91Q96JP5 570 aaPredicted RBP13.49□□□□□ -0.25
PTPRK-202ENST00000368205 BOLA1Q9Y3E2 137 aa13.49□□□□□ -0.25
PTPRK-202ENST00000368205 TMEM121BQ9BXQ6 578 aaPredicted RBP13.48□□□□□ -0.25
PTPRK-202ENST00000368205 G3V3G9 751 aa13.47□□□□□ -0.25
PTPRK-202ENST00000368205 SOX12O15370 315 aa13.44□□□□□ -0.26
PTPRK-202ENST00000368205 TAOK2Q9UL54 1235 aa13.44□□□□□ -0.26
PTPRK-202ENST00000368205 ECM2O94769 699 aaPredicted RBP13.38□□□□□ -0.27
PTPRK-202ENST00000368205 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
PTPRK-202ENST00000368205 PKD2Q13563 968 aa13.35□□□□□ -0.27
PTPRK-202ENST00000368205 MS4A4AQ96JQ5 239 aa13.35□□□□□ -0.27
PTPRK-202ENST00000368205 BCL11BQ9C0K0 894 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-202ENST00000368205 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
PTPRK-202ENST00000368205 MICALL2Q8IY33 904 aa13.33□□□□□ -0.28
PTPRK-202ENST00000368205 MARVELD3Q96A59 401 aa13.3□□□□□ -0.28
PTPRK-202ENST00000368205 NLRP6P59044 892 aa13.29□□□□□ -0.28
PTPRK-202ENST00000368205 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
PTPRK-202ENST00000368205 HOXB3P14651 431 aaPredicted RBP13.28□□□□□ -0.28
PTPRK-202ENST00000368205 STK25O00506 426 aa13.27□□□□□ -0.29
PTPRK-202ENST00000368205 RGL2O15211 777 aa13.27□□□□□ -0.29
PTPRK-202ENST00000368205 FBXO22Q8NEZ5 403 aa13.27□□□□□ -0.29
PTPRK-202ENST00000368205 EMP3P54852 163 aa13.24□□□□□ -0.29
PTPRK-202ENST00000368205 TMEM92Q6UXU6 159 aa13.24□□□□□ -0.29
PTPRK-202ENST00000368205 DOK7Q18PE1 504 aa13.23□□□□□ -0.29
PTPRK-202ENST00000368205 MFRPQ9BY79 579 aa13.23□□□□□ -0.29
PTPRK-202ENST00000368205 HOXB1P14653 301 aaPredicted RBP13.18□□□□□ -0.3
PTPRK-202ENST00000368205 ZNF710Q8N1W2 664 aa13.18□□□□□ -0.3
PTPRK-202ENST00000368205 HS3ST6Q96QI5 342 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.8 ms