RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
XCL1-201ENST00000367818 C7P10643 843 aa14.02□□□□□ -0.17
XCL1-201ENST00000367818 ATMINO43313 823 aaPredicted RBP14.01□□□□□ -0.17
XCL1-201ENST00000367818 MAMSTRQ6ZN01 415 aa14.01□□□□□ -0.17
XCL1-201ENST00000367818 POTEJP0CG39 1038 aa13.98□□□□□ -0.17
XCL1-201ENST00000367818 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
XCL1-201ENST00000367818 LCE2DQ5TA82 110 aaPredicted RBP13.92□□□□□ -0.18
XCL1-201ENST00000367818 SCUBE2Q9NQ36 999 aa13.9□□□□□ -0.18
XCL1-201ENST00000367818 ATN1P54259 1190 aaPredicted RBP13.85□□□□□ -0.19
XCL1-201ENST00000367818 FAM163AQ96GL9 167 aaPredicted RBP13.84□□□□□ -0.19
XCL1-201ENST00000367818 TSPYL2Q9H2G4 693 aaPredicted RBP13.82□□□□□ -0.2
XCL1-201ENST00000367818 CCDC61Q9Y6R9 512 aa13.81□□□□□ -0.2
XCL1-201ENST00000367818 BMP2KQ9NSY1 1161 aaPredicted RBP13.75□□□□□ -0.21
XCL1-201ENST00000367818 POTEFA5A3E0 1075 aa13.74□□□□□ -0.21
XCL1-201ENST00000367818 KIF12Q96FN5 646 aa13.74□□□□□ -0.21
XCL1-201ENST00000367818 TIE1P35590 1138 aa13.69□□□□□ -0.22
XCL1-201ENST00000367818 TRPC6Q9Y210 931 aa13.69□□□□□ -0.22
XCL1-201ENST00000367818 MAP3K13O43283 966 aa13.63□□□□□ -0.23
XCL1-201ENST00000367818 PROM2Q8N271 834 aa13.62□□□□□ -0.23
XCL1-201ENST00000367818 SEC24BO95487 1268 aa13.6□□□□□ -0.23
XCL1-201ENST00000367818 CDAN1Q8IWY9 1227 aa13.6□□□□□ -0.23
XCL1-201ENST00000367818 COLQQ9Y215 455 aaPredicted RBP13.6□□□□□ -0.23
XCL1-201ENST00000367818 TTLL13PA6NNM8 815 aa13.58□□□□□ -0.23
XCL1-201ENST00000367818 RASEFQ8IZ41 740 aa13.55□□□□□ -0.24
XCL1-201ENST00000367818 PLEKHG5O94827 1062 aa13.54□□□□□ -0.24
XCL1-201ENST00000367818 IER5LQ5T953 404 aa13.54□□□□□ -0.24
XCL1-201ENST00000367818 TRIM35Q9UPQ4 493 aa13.5□□□□□ -0.25
XCL1-201ENST00000367818 EHMT2Q96KQ7 1210 aa13.47□□□□□ -0.25
XCL1-201ENST00000367818 SLAIN1Q8ND83 568 aa13.46□□□□□ -0.25
XCL1-201ENST00000367818 ST18O60284 1047 aa13.45□□□□□ -0.26
XCL1-201ENST00000367818 SGIP1Q9BQI5 828 aa13.45□□□□□ -0.26
XCL1-201ENST00000367818 MIER1Q8N108 512 aa13.45□□□□□ -0.26
XCL1-201ENST00000367818 PCDHB13Q9Y5F0 798 aa13.44□□□□□ -0.26
XCL1-201ENST00000367818 PLCG2P16885 1265 aa13.35□□□□□ -0.27
XCL1-201ENST00000367818 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
XCL1-201ENST00000367818 IFNL1Q8IU54 200 aa13.32□□□□□ -0.28
XCL1-201ENST00000367818 TMEM106CQ9BVX2 250 aa13.32□□□□□ -0.28
XCL1-201ENST00000367818 TMEM121BQ9BXQ6 578 aaPredicted RBP13.31□□□□□ -0.28
XCL1-201ENST00000367818 SPNS2Q8IVW8 549 aa13.29□□□□□ -0.28
XCL1-201ENST00000367818 PLCD3Q8N3E9 789 aa13.29□□□□□ -0.28
XCL1-201ENST00000367818 IRX5P78411 483 aaPredicted RBP13.28□□□□□ -0.28
XCL1-201ENST00000367818 NUBP1P53384 320 aa13.26□□□□□ -0.29
XCL1-201ENST00000367818 ZBTB47Q9UFB7 747 aaPredicted RBP13.26□□□□□ -0.29
XCL1-201ENST00000367818 SNPHO15079 494 aa13.22□□□□□ -0.29
XCL1-201ENST00000367818 FAM212AQ96EL1 285 aa13.22□□□□□ -0.29
XCL1-201ENST00000367818 OCEL1Q9H607 264 aa13.19□□□□□ -0.3
XCL1-201ENST00000367818 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.18□□□□□ -0.3
XCL1-201ENST00000367818 MARVELD3Q96A59 401 aa13.17□□□□□ -0.3
XCL1-201ENST00000367818 EMP3P54852 163 aa13.06□□□□□ -0.32
XCL1-201ENST00000367818 PYGBP11216 843 aa13.02□□□□□ -0.33
XCL1-201ENST00000367818 C3orf67Q6ZVT6 689 aa13.02□□□□□ -0.33
XCL1-201ENST00000367818 PDCD7Q8N8D1 485 aaKnown RBP12.99□□□□□ -0.33
XCL1-201ENST00000367818 PCDHB8Q9UN66 801 aa12.99□□□□□ -0.33
XCL1-201ENST00000367818 KRTAP3-3Q9BYR6 98 aa12.98□□□□□ -0.33
XCL1-201ENST00000367818 KRTAP3-2Q9BYR7 98 aa12.98□□□□□ -0.33
XCL1-201ENST00000367818 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
XCL1-201ENST00000367818 HS3ST6Q96QI5 342 aa12.97□□□□□ -0.33
XCL1-201ENST00000367818 L3MBTL3Q96JM7 780 aaPredicted RBP12.94□□□□□ -0.34
XCL1-201ENST00000367818 POTEB3A0JP26 581 aa12.93□□□□□ -0.34
XCL1-201ENST00000367818 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
XCL1-201ENST00000367818 POTEBQ6S5H4 581 aa12.93□□□□□ -0.34
XCL1-201ENST00000367818 GOLGA2Q08379 1002 aa12.9□□□□□ -0.34
XCL1-201ENST00000367818 MKRN3Q13064 507 aaKnown RBP12.9□□□□□ -0.34
XCL1-201ENST00000367818 ZNF467Q7Z7K2 595 aaPredicted RBP12.86□□□□□ -0.35
XCL1-201ENST00000367818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.83□□□□□ -0.36
XCL1-201ENST00000367818 GSE1Q14687 1217 aa12.75□□□□□ -0.37
XCL1-201ENST00000367818 PSEN1P49768 467 aa12.74□□□□□ -0.37
XCL1-201ENST00000367818 ILDR1Q86SU0 546 aaPredicted RBP12.74□□□□□ -0.37
XCL1-201ENST00000367818 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
XCL1-201ENST00000367818 FKBP8Q14318 412 aa12.72□□□□□ -0.37
XCL1-201ENST00000367818 RNF166Q96A37 237 aaPredicted RBP12.7□□□□□ -0.38
XCL1-201ENST00000367818 G3V3G9 751 aa12.69□□□□□ -0.38
XCL1-201ENST00000367818 CHRM1P11229 460 aaPredicted RBP12.69□□□□□ -0.38
XCL1-201ENST00000367818 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
XCL1-201ENST00000367818 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
XCL1-201ENST00000367818 ZNF710Q8N1W2 664 aa12.68□□□□□ -0.38
XCL1-201ENST00000367818 FBXO3Q9UK99 471 aa12.67□□□□□ -0.38
XCL1-201ENST00000367818 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
XCL1-201ENST00000367818 ERBB3P21860 1342 aa12.65□□□□□ -0.38
XCL1-201ENST00000367818 PDAP1Q13442 181 aaKnown RBP12.64□□□□□ -0.39
XCL1-201ENST00000367818 DOK7Q18PE1 504 aa12.64□□□□□ -0.39
XCL1-201ENST00000367818 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
XCL1-201ENST00000367818 CABP2Q9NPB3 220 aa12.59□□□□□ -0.39
XCL1-201ENST00000367818 MYT1LQ9UL68 1186 aa12.59□□□□□ -0.39
XCL1-201ENST00000367818 RIMBP2O15034 1052 aa12.56□□□□□ -0.4
XCL1-201ENST00000367818 VARS2Q5ST30 1063 aaKnown RBP12.56□□□□□ -0.4
XCL1-201ENST00000367818 VASPP50552 380 aaPredicted RBP12.54□□□□□ -0.4
XCL1-201ENST00000367818 PTGER2P43116 358 aa12.49□□□□□ -0.41
XCL1-201ENST00000367818 ZNF687Q8N1G0 1237 aa12.48□□□□□ -0.41
XCL1-201ENST00000367818 ZSWIM6Q9HCJ5 1215 aa12.47□□□□□ -0.41
XCL1-201ENST00000367818 GPR153Q6NV75 609 aa12.39□□□□□ -0.43
XCL1-201ENST00000367818 TMEM92Q6UXU6 159 aa12.38□□□□□ -0.43
XCL1-201ENST00000367818 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
XCL1-201ENST00000367818 CIZ1Q9ULV3 898 aaPredicted RBP12.38□□□□□ -0.43
XCL1-201ENST00000367818 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
XCL1-201ENST00000367818 SPOCK2Q92563 424 aa12.33□□□□□ -0.44
XCL1-201ENST00000367818 ANKRD13DQ6ZTN6 518 aa12.32□□□□□ -0.44
XCL1-201ENST00000367818 LSM11P83369 360 aaKnown RBP eCLIP12.27□□□□□ -0.45
XCL1-201ENST00000367818 ARSIQ5FYB1 569 aa12.27□□□□□ -0.45
XCL1-201ENST00000367818 ZNF316A6NFI3 1004 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms