RNA–Protein interactions for RNA: ENST00000367427.7

CFHR3-202, Transcript of complement factor H related 3, humanhuman

TSL 5

Gene CFHR3, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-202ENST00000367427 PLEKHG5O94827 1062 aa19.47■□□□□ 0.71
CFHR3-202ENST00000367427 KIF12Q96FN5 646 aa19.46■□□□□ 0.71
CFHR3-202ENST00000367427 ATMINO43313 823 aaPredicted RBP19.45■□□□□ 0.7
CFHR3-202ENST00000367427 RASEFQ8IZ41 740 aa19.45■□□□□ 0.7
CFHR3-202ENST00000367427 OTUD5Q96G74 571 aa19.41■□□□□ 0.7
CFHR3-202ENST00000367427 FKBP8Q14318 412 aa19.4■□□□□ 0.7
CFHR3-202ENST00000367427 PLCD3Q8N3E9 789 aa19.36■□□□□ 0.69
CFHR3-202ENST00000367427 MAP3K13O43283 966 aa19.31■□□□□ 0.68
CFHR3-202ENST00000367427 C7P10643 843 aa19.31■□□□□ 0.68
CFHR3-202ENST00000367427 SLC39A7Q92504 469 aa19.31■□□□□ 0.68
CFHR3-202ENST00000367427 METRNQ9UJH8 293 aa19.31■□□□□ 0.68
CFHR3-202ENST00000367427 NUBP1P53384 320 aa19.29■□□□□ 0.68
CFHR3-202ENST00000367427 TRPC6Q9Y210 931 aa19.29■□□□□ 0.68
CFHR3-202ENST00000367427 ATN1P54259 1190 aaPredicted RBP19.28■□□□□ 0.68
CFHR3-202ENST00000367427 POTEJP0CG39 1038 aa19.24■□□□□ 0.67
CFHR3-202ENST00000367427 BMP2KQ9NSY1 1161 aaPredicted RBP19.24■□□□□ 0.67
CFHR3-202ENST00000367427 ZBTB47Q9UFB7 747 aaPredicted RBP19.24■□□□□ 0.67
CFHR3-202ENST00000367427 TIE1P35590 1138 aa19.18■□□□□ 0.66
CFHR3-202ENST00000367427 SGIP1Q9BQI5 828 aa19.15■□□□□ 0.66
CFHR3-202ENST00000367427 POTEFA5A3E0 1075 aa19.13■□□□□ 0.65
CFHR3-202ENST00000367427 TTLL13PA6NNM8 815 aa19.08■□□□□ 0.64
CFHR3-202ENST00000367427 PCDHB13Q9Y5F0 798 aa19.06■□□□□ 0.64
CFHR3-202ENST00000367427 FAM212AQ96EL1 285 aa19.03■□□□□ 0.64
CFHR3-202ENST00000367427 FBXO3Q9UK99 471 aa19.03■□□□□ 0.64
CFHR3-202ENST00000367427 MAMSTRQ6ZN01 415 aa19.01■□□□□ 0.63
CFHR3-202ENST00000367427 IFNL1Q8IU54 200 aa19■□□□□ 0.63
CFHR3-202ENST00000367427 COLQQ9Y215 455 aaPredicted RBP18.96■□□□□ 0.63
CFHR3-202ENST00000367427 TRIM35Q9UPQ4 493 aa18.93■□□□□ 0.62
CFHR3-202ENST00000367427 IER5LQ5T953 404 aa18.9■□□□□ 0.62
CFHR3-202ENST00000367427 SCUBE2Q9NQ36 999 aa18.88■□□□□ 0.61
CFHR3-202ENST00000367427 DCAF8Q5TAQ9 597 aa18.87■□□□□ 0.61
CFHR3-202ENST00000367427 VASPP50552 380 aaPredicted RBP18.84■□□□□ 0.61
CFHR3-202ENST00000367427 POTEMA6NI47 508 aa18.83■□□□□ 0.6
CFHR3-202ENST00000367427 SEC24BO95487 1268 aa18.83■□□□□ 0.6
CFHR3-202ENST00000367427 TMEM106CQ9BVX2 250 aa18.83■□□□□ 0.6
CFHR3-202ENST00000367427 PYGBP11216 843 aa18.81■□□□□ 0.6
CFHR3-202ENST00000367427 LCE2DQ5TA82 110 aaPredicted RBP18.79■□□□□ 0.6
CFHR3-202ENST00000367427 POTEGQ6S5H5 508 aa18.79■□□□□ 0.6
CFHR3-202ENST00000367427 PCDHB8Q9UN66 801 aa18.71■□□□□ 0.59
CFHR3-202ENST00000367427 IRX5P78411 483 aaPredicted RBP18.7■□□□□ 0.58
CFHR3-202ENST00000367427 KLHL34Q8N239 644 aa18.7■□□□□ 0.58
CFHR3-202ENST00000367427 FAM163AQ96GL9 167 aaPredicted RBP18.67■□□□□ 0.58
CFHR3-202ENST00000367427 PLSCR2Q9NRY7 297 aa18.67■□□□□ 0.58
CFHR3-202ENST00000367427 GSE1Q14687 1217 aa18.66■□□□□ 0.58
CFHR3-202ENST00000367427 CHRM1P11229 460 aaPredicted RBP18.62■□□□□ 0.57
CFHR3-202ENST00000367427 PLCG2P16885 1265 aa18.61■□□□□ 0.57
CFHR3-202ENST00000367427 OCEL1Q9H607 264 aa18.57■□□□□ 0.56
CFHR3-202ENST00000367427 PCDH10Q9P2E7 1040 aa18.57■□□□□ 0.56
CFHR3-202ENST00000367427 IFNLR1Q8IU57 520 aaPredicted RBP18.55■□□□□ 0.56
CFHR3-202ENST00000367427 ZNF467Q7Z7K2 595 aaPredicted RBP18.54■□□□□ 0.56
CFHR3-202ENST00000367427 SLAIN1Q8ND83 568 aa18.5■□□□□ 0.55
CFHR3-202ENST00000367427 SPOCK2Q92563 424 aa18.45■□□□□ 0.54
CFHR3-202ENST00000367427 PDCD7Q8N8D1 485 aaKnown RBP18.42■□□□□ 0.54
CFHR3-202ENST00000367427 PSEN1P49768 467 aa18.4■□□□□ 0.54
CFHR3-202ENST00000367427 ST18O60284 1047 aa18.34■□□□□ 0.53
CFHR3-202ENST00000367427 MKRN3Q13064 507 aaKnown RBP18.32■□□□□ 0.52
CFHR3-202ENST00000367427 CIZ1Q9ULV3 898 aaPredicted RBP18.32■□□□□ 0.52
CFHR3-202ENST00000367427 ILDR1Q86SU0 546 aaPredicted RBP18.31■□□□□ 0.52
CFHR3-202ENST00000367427 PDAP1Q13442 181 aaKnown RBP18.3■□□□□ 0.52
CFHR3-202ENST00000367427 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.3■□□□□ 0.52
CFHR3-202ENST00000367427 GOLGA2Q08379 1002 aa18.28■□□□□ 0.52
CFHR3-202ENST00000367427 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.25■□□□□ 0.51
CFHR3-202ENST00000367427 L3MBTL3Q96JM7 780 aaPredicted RBP18.23■□□□□ 0.51
CFHR3-202ENST00000367427 CDAN1Q8IWY9 1227 aa18.21■□□□□ 0.51
CFHR3-202ENST00000367427 SNPHO15079 494 aa18.16■□□□□ 0.5
CFHR3-202ENST00000367427 CABP2Q9NPB3 220 aa18.15■□□□□ 0.5
CFHR3-202ENST00000367427 DPY19L2Q6NUT2 758 aa18.14■□□□□ 0.49
CFHR3-202ENST00000367427 TMEM121BQ9BXQ6 578 aaPredicted RBP18.14■□□□□ 0.49
CFHR3-202ENST00000367427 C3orf67Q6ZVT6 689 aa18.13■□□□□ 0.49
CFHR3-202ENST00000367427 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
CFHR3-202ENST00000367427 BOLA1Q9Y3E2 137 aa18■□□□□ 0.47
CFHR3-202ENST00000367427 MARVELD3Q96A59 401 aa17.99■□□□□ 0.47
CFHR3-202ENST00000367427 EFCAB3Q8N7B9 438 aa17.96■□□□□ 0.47
CFHR3-202ENST00000367427 RNF25Q96BH1 459 aaPredicted RBP17.95■□□□□ 0.46
CFHR3-202ENST00000367427 RIOK3O14730 519 aaKnown RBP17.89■□□□□ 0.45
CFHR3-202ENST00000367427 HOXB3P14651 431 aaPredicted RBP17.86■□□□□ 0.45
CFHR3-202ENST00000367427 G3V3G9 751 aa17.85■□□□□ 0.45
CFHR3-202ENST00000367427 POTEB3A0JP26 581 aa17.84■□□□□ 0.45
CFHR3-202ENST00000367427 POTEBQ6S5H4 581 aa17.84■□□□□ 0.45
CFHR3-202ENST00000367427 EMP3P54852 163 aa17.83■□□□□ 0.44
CFHR3-202ENST00000367427 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.82■□□□□ 0.44
CFHR3-202ENST00000367427 ZFP91Q96JP5 570 aaPredicted RBP17.82■□□□□ 0.44
CFHR3-202ENST00000367427 VGFO15240 615 aaPredicted RBP17.8■□□□□ 0.44
CFHR3-202ENST00000367427 SOX12O15370 315 aa17.8■□□□□ 0.44
CFHR3-202ENST00000367427 SPNS2Q8IVW8 549 aa17.8■□□□□ 0.44
CFHR3-202ENST00000367427 MS4A4AQ96JQ5 239 aa17.78■□□□□ 0.44
CFHR3-202ENST00000367427 HS3ST6Q96QI5 342 aa17.76■□□□□ 0.43
CFHR3-202ENST00000367427 MMRN1Q13201 1228 aa17.74■□□□□ 0.43
CFHR3-202ENST00000367427 MICALL2Q8IY33 904 aa17.74■□□□□ 0.43
CFHR3-202ENST00000367427 FAM205CA6NFA0 338 aa17.73■□□□□ 0.43
CFHR3-202ENST00000367427 TMEM92Q6UXU6 159 aa17.73■□□□□ 0.43
CFHR3-202ENST00000367427 PHF8Q9UPP1 1060 aa17.71■□□□□ 0.43
CFHR3-202ENST00000367427 KRTAP3-3Q9BYR6 98 aa17.7■□□□□ 0.42
CFHR3-202ENST00000367427 KRTAP3-2Q9BYR7 98 aa17.7■□□□□ 0.42
CFHR3-202ENST00000367427 HOXB1P14653 301 aaPredicted RBP17.69■□□□□ 0.42
CFHR3-202ENST00000367427 DOK7Q18PE1 504 aa17.66■□□□□ 0.42
CFHR3-202ENST00000367427 ZNF710Q8N1W2 664 aa17.62■□□□□ 0.41
CFHR3-202ENST00000367427 FBXO22Q8NEZ5 403 aa17.6■□□□□ 0.41
CFHR3-202ENST00000367427 BCL11BQ9C0K0 894 aaPredicted RBP17.58■□□□□ 0.4
CFHR3-202ENST00000367427 NLRP6P59044 892 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms