RNA–Protein interactions for RNA: ENST00000366522.6

EFCAB2-202, Transcript of EF-hand calcium binding domain 2, humanhuman

TSL 2 BASIC

Gene EFCAB2, Length 6,167 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB2-202ENST00000366522 TONSLQ96HA7 1378 aa19.46■□□□□ 0.71
EFCAB2-202ENST00000366522 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
EFCAB2-202ENST00000366522 GOLGA6L22H0YM25 854 aa19.46■□□□□ 0.71
EFCAB2-202ENST00000366522 PTMAP06454 111 aaKnown RBP19.44■□□□□ 0.7
EFCAB2-202ENST00000366522 HAP1P54257 671 aaPredicted RBP19.44■□□□□ 0.7
EFCAB2-202ENST00000366522 MYH16Q9H6N6 1097 aa19.44■□□□□ 0.7
EFCAB2-202ENST00000366522 WDR43Q15061 677 aaKnown RBP eCLIP19.43■□□□□ 0.7
EFCAB2-202ENST00000366522 SENP3Q9H4L4 574 aaPredicted RBP19.43■□□□□ 0.7
EFCAB2-202ENST00000366522 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
EFCAB2-202ENST00000366522 PPM1GO15355 546 aaPredicted RBP19.42■□□□□ 0.7
EFCAB2-202ENST00000366522 TMC1Q8TDI8 760 aa19.4■□□□□ 0.7
EFCAB2-202ENST00000366522 MRS2Q9HD23 443 aa19.39■□□□□ 0.7
EFCAB2-202ENST00000366522 PPP1R15AO75807 674 aaPredicted RBP19.38■□□□□ 0.69
EFCAB2-202ENST00000366522 CHIC2Q9UKJ5 165 aa19.38■□□□□ 0.69
EFCAB2-202ENST00000366522 LAS1LQ9Y4W2 734 aaKnown RBP19.36■□□□□ 0.69
EFCAB2-202ENST00000366522 CSRNP3Q8WYN3 585 aa19.34■□□□□ 0.69
EFCAB2-202ENST00000366522 KDM2AQ9Y2K7 1162 aa19.32■□□□□ 0.68
EFCAB2-202ENST00000366522 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.32■□□□□ 0.68
EFCAB2-202ENST00000366522 TSPY4P0CV99 314 aa19.31■□□□□ 0.68
EFCAB2-202ENST00000366522 TSPY10P0CW01 314 aa19.31■□□□□ 0.68
EFCAB2-202ENST00000366522 ARID4BQ4LE39 1312 aaPredicted RBP19.26■□□□□ 0.67
EFCAB2-202ENST00000366522 SUPT16HQ9Y5B9 1047 aaKnown RBP19.24■□□□□ 0.67
EFCAB2-202ENST00000366522 TULP1O00294 542 aaPredicted RBP19.23■□□□□ 0.67
EFCAB2-202ENST00000366522 GOLGA6L6A8MZA4 724 aa19.21■□□□□ 0.67
EFCAB2-202ENST00000366522 ZRSR1Q15695 479 aaKnown RBP19.21■□□□□ 0.67
EFCAB2-202ENST00000366522 CHMP7Q8WUX9 453 aaPredicted RBP19.21■□□□□ 0.67
EFCAB2-202ENST00000366522 NPHP1O15259 732 aa19.21■□□□□ 0.67
EFCAB2-202ENST00000366522 CHAF1AQ13111 956 aaPredicted RBP19.2■□□□□ 0.66
EFCAB2-202ENST00000366522 NOP58Q9Y2X3 529 aaKnown RBP19.19■□□□□ 0.66
EFCAB2-202ENST00000366522 L1TD1Q5T7N2 865 aaKnown RBP19.17■□□□□ 0.66
EFCAB2-202ENST00000366522 DCAF1Q9Y4B6 1507 aa19.15■□□□□ 0.66
EFCAB2-202ENST00000366522 DEKP35659 375 aaKnown RBP19.14■□□□□ 0.65
EFCAB2-202ENST00000366522 TNNT3P45378 269 aaPredicted RBP19.14■□□□□ 0.65
EFCAB2-202ENST00000366522 MSNP26038 577 aaKnown RBP19.13■□□□□ 0.65
EFCAB2-202ENST00000366522 TAOK2Q9UL54 1235 aa19.13■□□□□ 0.65
EFCAB2-202ENST00000366522 ARID3AQ99856 593 aa19.1■□□□□ 0.65
EFCAB2-202ENST00000366522 KCNH8Q96L42 1107 aa19.09■□□□□ 0.65
EFCAB2-202ENST00000366522 NRDCO43847 1150 aa19.08■□□□□ 0.65
EFCAB2-202ENST00000366522 CASC1Q6TDU7 716 aa19.07■□□□□ 0.64
EFCAB2-202ENST00000366522 CFAP53Q96M91 514 aa19.07■□□□□ 0.64
EFCAB2-202ENST00000366522 PLCB2Q00722 1185 aa19.06■□□□□ 0.64
EFCAB2-202ENST00000366522 LMOD2Q6P5Q4 547 aa19.05■□□□□ 0.64
EFCAB2-202ENST00000366522 MTUS2Q5JR59 1369 aa19.05■□□□□ 0.64
EFCAB2-202ENST00000366522 RGS3P49796 1198 aa19.05■□□□□ 0.64
EFCAB2-202ENST00000366522 MYO15BQ96JP2 1530 aa19.03■□□□□ 0.64
EFCAB2-202ENST00000366522 B4GALNT3Q6L9W6 998 aa19.03■□□□□ 0.64
EFCAB2-202ENST00000366522 SPRYD3Q8NCJ5 442 aa19.03■□□□□ 0.64
EFCAB2-202ENST00000366522 RRP7BPQ9NSQ0 103 aa19.01■□□□□ 0.63
EFCAB2-202ENST00000366522 NEUROD2Q15784 382 aa18.98■□□□□ 0.63
EFCAB2-202ENST00000366522 GOLGA2Q08379 1002 aa18.96■□□□□ 0.63
EFCAB2-202ENST00000366522 PLEKHD1A6NEE1 506 aa18.95■□□□□ 0.62
EFCAB2-202ENST00000366522 CALRP27797 417 aaKnown RBP18.95■□□□□ 0.62
EFCAB2-202ENST00000366522 CDCA8Q53HL2 280 aa18.95■□□□□ 0.62
EFCAB2-202ENST00000366522 EIF4G2P78344 907 aaKnown RBP eCLIP18.94■□□□□ 0.62
EFCAB2-202ENST00000366522 SCRIBQ14160 1630 aa18.94■□□□□ 0.62
EFCAB2-202ENST00000366522 FTSJ3Q8IY81 847 aaKnown RBP18.91■□□□□ 0.62
EFCAB2-202ENST00000366522 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
EFCAB2-202ENST00000366522 RGL3Q3MIN7 710 aa18.91■□□□□ 0.62
EFCAB2-202ENST00000366522 POGKQ9P215 609 aa18.9■□□□□ 0.62
EFCAB2-202ENST00000366522 OS9Q13438 667 aaPredicted RBP18.89■□□□□ 0.61
EFCAB2-202ENST00000366522 FRAT1Q92837 279 aaPredicted RBP18.89■□□□□ 0.61
EFCAB2-202ENST00000366522 CLSTN1O94985 981 aa18.88■□□□□ 0.61
EFCAB2-202ENST00000366522 KNSTRNQ9Y448 316 aa18.88■□□□□ 0.61
EFCAB2-202ENST00000366522 NCBP3Q53F19 620 aaKnown RBP18.88■□□□□ 0.61
EFCAB2-202ENST00000366522 PNNQ9H307 717 aaKnown RBP18.88■□□□□ 0.61
EFCAB2-202ENST00000366522 HSP90AB1P08238 724 aaKnown RBP18.87■□□□□ 0.61
EFCAB2-202ENST00000366522 PPP4R2Q9NY27 417 aa18.87■□□□□ 0.61
EFCAB2-202ENST00000366522 NUDCQ9Y266 331 aa18.86■□□□□ 0.61
EFCAB2-202ENST00000366522 PTMSP20962 102 aa18.86■□□□□ 0.61
EFCAB2-202ENST00000366522 FGD1P98174 961 aa18.86■□□□□ 0.61
EFCAB2-202ENST00000366522 TRHP20396 242 aaPredicted RBP18.85■□□□□ 0.61
EFCAB2-202ENST00000366522 RBM19Q9Y4C8 960 aaKnown RBP18.84■□□□□ 0.61
EFCAB2-202ENST00000366522 SETQ01105 290 aaPredicted RBP18.83■□□□□ 0.6
EFCAB2-202ENST00000366522 SIN3AQ96ST3 1273 aa18.82■□□□□ 0.6
EFCAB2-202ENST00000366522 RSPH6AQ9H0K4 717 aa18.81■□□□□ 0.6
EFCAB2-202ENST00000366522 NAP1L2Q9ULW6 460 aaPredicted RBP18.81■□□□□ 0.6
EFCAB2-202ENST00000366522 RSF1Q96T23 1441 aaPredicted RBP18.81■□□□□ 0.6
EFCAB2-202ENST00000366522 HSP90AA2PQ14568 343 aaPredicted RBP18.81■□□□□ 0.6
EFCAB2-202ENST00000366522 CC2D1BQ5T0F9 858 aaKnown RBP18.81■□□□□ 0.6
EFCAB2-202ENST00000366522 DRC7Q8IY82 874 aa18.8■□□□□ 0.6
EFCAB2-202ENST00000366522 CHMP4BQ9H444 224 aaKnown RBP18.79■□□□□ 0.6
EFCAB2-202ENST00000366522 KIAA2012Q0VF49 1180 aa18.79■□□□□ 0.6
EFCAB2-202ENST00000366522 ISY1Q9ULR0 285 aaKnown RBP18.79■□□□□ 0.6
EFCAB2-202ENST00000366522 KCNJ4P48050 445 aa18.79■□□□□ 0.6
EFCAB2-202ENST00000366522 GOLGA6L1Q8N7Z2 621 aa18.77■□□□□ 0.6
EFCAB2-202ENST00000366522 HSCBQ8IWL3 235 aa18.77■□□□□ 0.59
EFCAB2-202ENST00000366522 GZF1Q9H116 711 aaPredicted RBP18.76■□□□□ 0.59
EFCAB2-202ENST00000366522 HDGFP51858 240 aaKnown RBP18.76■□□□□ 0.59
EFCAB2-202ENST00000366522 VSIG10Q8N0Z9 540 aa18.74■□□□□ 0.59
EFCAB2-202ENST00000366522 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
EFCAB2-202ENST00000366522 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
EFCAB2-202ENST00000366522 GOLGA6L4A6NEF3 574 aa18.71■□□□□ 0.59
EFCAB2-202ENST00000366522 CARD11Q9BXL7 1154 aa18.7■□□□□ 0.58
EFCAB2-202ENST00000366522 TMX4Q9H1E5 349 aaPredicted RBP18.7■□□□□ 0.58
EFCAB2-202ENST00000366522 MS4A1P11836 297 aa18.69■□□□□ 0.58
EFCAB2-202ENST00000366522 CLIP1P30622 1438 aa18.68■□□□□ 0.58
EFCAB2-202ENST00000366522 NOC3LQ8WTT2 800 aaKnown RBP18.68■□□□□ 0.58
EFCAB2-202ENST00000366522 U2SURPO15042 1029 aaKnown RBP18.68■□□□□ 0.58
EFCAB2-202ENST00000366522 CCDC180Q9P1Z9 1646 aa18.65■□□□□ 0.58
EFCAB2-202ENST00000366522 MLECQ14165 292 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms