RNA–Protein interactions for RNA: ENST00000364426.1

RNU4-41P-201, Transcript of RNA, U4 small nuclear 41, pseudogene, humanhuman

BASIC

Gene RNU4-41P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-41P-201ENST00000364426 RASEFQ8IZ41 740 aa6.04□□□□□ -1.44
RNU4-41P-201ENST00000364426 TSPYL2Q9H2G4 693 aaPredicted RBP6.04□□□□□ -1.44
RNU4-41P-201ENST00000364426 KIF12Q96FN5 646 aa6.03□□□□□ -1.44
RNU4-41P-201ENST00000364426 MS4A3Q96HJ5 214 aa6.03□□□□□ -1.44
RNU4-41P-201ENST00000364426 LHX8Q68G74 356 aa6.02□□□□□ -1.45
RNU4-41P-201ENST00000364426 ASTLQ6HA08 431 aaPredicted RBP6□□□□□ -1.45
RNU4-41P-201ENST00000364426 VASPP50552 380 aaPredicted RBP5.99□□□□□ -1.45
RNU4-41P-201ENST00000364426 SGIP1Q9BQI5 828 aa5.99□□□□□ -1.45
RNU4-41P-201ENST00000364426 ATMINO43313 823 aaPredicted RBP5.98□□□□□ -1.45
RNU4-41P-201ENST00000364426 FAM212AQ96EL1 285 aa5.98□□□□□ -1.45
RNU4-41P-201ENST00000364426 MAP3K13O43283 966 aa5.97□□□□□ -1.45
RNU4-41P-201ENST00000364426 PELP1Q8IZL8 1130 aaKnown RBP5.96□□□□□ -1.46
RNU4-41P-201ENST00000364426 TIE1P35590 1138 aa5.95□□□□□ -1.46
RNU4-41P-201ENST00000364426 C7P10643 843 aa5.93□□□□□ -1.46
RNU4-41P-201ENST00000364426 SLC39A7Q92504 469 aa5.93□□□□□ -1.46
RNU4-41P-201ENST00000364426 BMP2KQ9NSY1 1161 aaPredicted RBP5.93□□□□□ -1.46
RNU4-41P-201ENST00000364426 ATN1P54259 1190 aaPredicted RBP5.92□□□□□ -1.46
RNU4-41P-201ENST00000364426 TRPC6Q9Y210 931 aa5.92□□□□□ -1.46
RNU4-41P-201ENST00000364426 METRNQ9UJH8 293 aa5.91□□□□□ -1.46
RNU4-41P-201ENST00000364426 PCDHB13Q9Y5F0 798 aa5.91□□□□□ -1.46
RNU4-41P-201ENST00000364426 GSE1Q14687 1217 aa5.9□□□□□ -1.46
RNU4-41P-201ENST00000364426 DCAF8Q5TAQ9 597 aa5.9□□□□□ -1.46
RNU4-41P-201ENST00000364426 IFNL1Q8IU54 200 aa5.9□□□□□ -1.46
RNU4-41P-201ENST00000364426 KLHL34Q8N239 644 aa5.9□□□□□ -1.46
RNU4-41P-201ENST00000364426 TTLL13PA6NNM8 815 aa5.89□□□□□ -1.47
RNU4-41P-201ENST00000364426 POTEB2H3BUK9 544 aa5.89□□□□□ -1.47
RNU4-41P-201ENST00000364426 IFNLR1Q8IU57 520 aaPredicted RBP5.89□□□□□ -1.47
RNU4-41P-201ENST00000364426 CHRM1P11229 460 aaPredicted RBP5.88□□□□□ -1.47
RNU4-41P-201ENST00000364426 IER5LQ5T953 404 aa5.87□□□□□ -1.47
RNU4-41P-201ENST00000364426 SPOCK2Q92563 424 aa5.87□□□□□ -1.47
RNU4-41P-201ENST00000364426 PYGBP11216 843 aa5.86□□□□□ -1.47
RNU4-41P-201ENST00000364426 OTUD5Q96G74 571 aa5.86□□□□□ -1.47
RNU4-41P-201ENST00000364426 POTEFA5A3E0 1075 aa5.85□□□□□ -1.47
RNU4-41P-201ENST00000364426 POTEJP0CG39 1038 aa5.84□□□□□ -1.47
RNU4-41P-201ENST00000364426 TRIM35Q9UPQ4 493 aa5.84□□□□□ -1.47
RNU4-41P-201ENST00000364426 MAMSTRQ6ZN01 415 aa5.83□□□□□ -1.48
RNU4-41P-201ENST00000364426 ZNF467Q7Z7K2 595 aaPredicted RBP5.83□□□□□ -1.48
RNU4-41P-201ENST00000364426 TMEM106CQ9BVX2 250 aa5.83□□□□□ -1.48
RNU4-41P-201ENST00000364426 PCDHB8Q9UN66 801 aa5.81□□□□□ -1.48
RNU4-41P-201ENST00000364426 COLQQ9Y215 455 aaPredicted RBP5.81□□□□□ -1.48
RNU4-41P-201ENST00000364426 TRIM41Q8WV44 630 aa5.79□□□□□ -1.48
RNU4-41P-201ENST00000364426 SEC24BO95487 1268 aa5.78□□□□□ -1.48
RNU4-41P-201ENST00000364426 IRX5P78411 483 aaPredicted RBP5.78□□□□□ -1.48
RNU4-41P-201ENST00000364426 SCUBE2Q9NQ36 999 aa5.77□□□□□ -1.49
RNU4-41P-201ENST00000364426 CIZ1Q9ULV3 898 aaPredicted RBP5.77□□□□□ -1.49
RNU4-41P-201ENST00000364426 PLCG2P16885 1265 aa5.75□□□□□ -1.49
RNU4-41P-201ENST00000364426 PSEN1P49768 467 aa5.75□□□□□ -1.49
RNU4-41P-201ENST00000364426 PDAP1Q13442 181 aaKnown RBP5.75□□□□□ -1.49
RNU4-41P-201ENST00000364426 OCEL1Q9H607 264 aa5.75□□□□□ -1.49
RNU4-41P-201ENST00000364426 ILDR1Q86SU0 546 aaPredicted RBP5.73□□□□□ -1.49
RNU4-41P-201ENST00000364426 MKRN3Q13064 507 aaKnown RBP5.71□□□□□ -1.5
RNU4-41P-201ENST00000364426 PDCD7Q8N8D1 485 aaKnown RBP5.71□□□□□ -1.5
RNU4-41P-201ENST00000364426 GOLGA2Q08379 1002 aa5.7□□□□□ -1.5
RNU4-41P-201ENST00000364426 RIOK3O14730 519 aaKnown RBP5.67□□□□□ -1.5
RNU4-41P-201ENST00000364426 LCE2DQ5TA82 110 aaPredicted RBP5.67□□□□□ -1.5
RNU4-41P-201ENST00000364426 RNF25Q96BH1 459 aaPredicted RBP5.67□□□□□ -1.5
RNU4-41P-201ENST00000364426 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.67□□□□□ -1.5
RNU4-41P-201ENST00000364426 SLAIN1Q8ND83 568 aa5.66□□□□□ -1.5
RNU4-41P-201ENST00000364426 L3MBTL3Q96JM7 780 aaPredicted RBP5.66□□□□□ -1.5
RNU4-41P-201ENST00000364426 CABP2Q9NPB3 220 aa5.66□□□□□ -1.5
RNU4-41P-201ENST00000364426 POTEMA6NI47 508 aa5.65□□□□□ -1.5
RNU4-41P-201ENST00000364426 VGFO15240 615 aaPredicted RBP5.65□□□□□ -1.5
RNU4-41P-201ENST00000364426 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.65□□□□□ -1.5
RNU4-41P-201ENST00000364426 POTEGQ6S5H5 508 aa5.64□□□□□ -1.51
RNU4-41P-201ENST00000364426 PCDH10Q9P2E7 1040 aa5.63□□□□□ -1.51
RNU4-41P-201ENST00000364426 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.62□□□□□ -1.51
RNU4-41P-201ENST00000364426 FAM163AQ96GL9 167 aaPredicted RBP5.62□□□□□ -1.51
RNU4-41P-201ENST00000364426 ZFP91Q96JP5 570 aaPredicted RBP5.62□□□□□ -1.51
RNU4-41P-201ENST00000364426 TAOK2Q9UL54 1235 aa5.62□□□□□ -1.51
RNU4-41P-201ENST00000364426 C3orf67Q6ZVT6 689 aa5.61□□□□□ -1.51
RNU4-41P-201ENST00000364426 EFCAB3Q8N7B9 438 aa5.61□□□□□ -1.51
RNU4-41P-201ENST00000364426 SNPHO15079 494 aa5.6□□□□□ -1.51
RNU4-41P-201ENST00000364426 SOX12O15370 315 aa5.6□□□□□ -1.51
RNU4-41P-201ENST00000364426 PKD2Q13563 968 aa5.6□□□□□ -1.51
RNU4-41P-201ENST00000364426 DPY19L2Q6NUT2 758 aa5.6□□□□□ -1.51
RNU4-41P-201ENST00000364426 TMEM121BQ9BXQ6 578 aaPredicted RBP5.6□□□□□ -1.51
RNU4-41P-201ENST00000364426 BOLA1Q9Y3E2 137 aa5.59□□□□□ -1.51
RNU4-41P-201ENST00000364426 ST18O60284 1047 aa5.58□□□□□ -1.52
RNU4-41P-201ENST00000364426 ECM2O94769 699 aaPredicted RBP5.58□□□□□ -1.52
RNU4-41P-201ENST00000364426 G3V3G9 751 aa5.56□□□□□ -1.52
RNU4-41P-201ENST00000364426 MS4A4AQ96JQ5 239 aa5.56□□□□□ -1.52
RNU4-41P-201ENST00000364426 BCL11BQ9C0K0 894 aaPredicted RBP5.55□□□□□ -1.52
RNU4-41P-201ENST00000364426 RGL2O15211 777 aa5.54□□□□□ -1.52
RNU4-41P-201ENST00000364426 NLRP6P59044 892 aa5.54□□□□□ -1.52
RNU4-41P-201ENST00000364426 FBXO22Q8NEZ5 403 aa5.54□□□□□ -1.52
RNU4-41P-201ENST00000364426 PHF8Q9UPP1 1060 aa5.54□□□□□ -1.52
RNU4-41P-201ENST00000364426 MICALL2Q8IY33 904 aa5.53□□□□□ -1.52
RNU4-41P-201ENST00000364426 STK24Q9Y6E0 443 aa5.53□□□□□ -1.52
RNU4-41P-201ENST00000364426 STK25O00506 426 aa5.52□□□□□ -1.53
RNU4-41P-201ENST00000364426 MFRPQ9BY79 579 aa5.51□□□□□ -1.53
RNU4-41P-201ENST00000364426 HOXB3P14651 431 aaPredicted RBP5.5□□□□□ -1.53
RNU4-41P-201ENST00000364426 TMEM92Q6UXU6 159 aa5.49□□□□□ -1.53
RNU4-41P-201ENST00000364426 CDAN1Q8IWY9 1227 aa5.49□□□□□ -1.53
RNU4-41P-201ENST00000364426 PLSCR2Q9NRY7 297 aa5.48□□□□□ -1.53
RNU4-41P-201ENST00000364426 DOK7Q18PE1 504 aa5.47□□□□□ -1.53
RNU4-41P-201ENST00000364426 HS6ST3Q8IZP7 471 aa5.47□□□□□ -1.53
RNU4-41P-201ENST00000364426 HOXB1P14653 301 aaPredicted RBP5.46□□□□□ -1.54
RNU4-41P-201ENST00000364426 MARVELD3Q96A59 401 aa5.46□□□□□ -1.54
RNU4-41P-201ENST00000364426 DNAJC5Q9H3Z4 198 aa5.46□□□□□ -1.54
RNU4-41P-201ENST00000364426 KIF3CO14782 793 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms