RNA–Protein interactions for RNA: ENST00000363858.1

RNU6-271P-201, Transcript of RNA, U6 small nuclear 271, pseudogene, humanhuman

BASIC

Gene RNU6-271P, Length 105 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-271P-201ENST00000363858 FAM212AQ96EL1 285 aa5.77□□□□□ -1.49
RNU6-271P-201ENST00000363858 DCAF8Q5TAQ9 597 aa5.76□□□□□ -1.49
RNU6-271P-201ENST00000363858 SP7Q8TDD2 431 aaPredicted RBP5.76□□□□□ -1.49
RNU6-271P-201ENST00000363858 KIF12Q96FN5 646 aa5.76□□□□□ -1.49
RNU6-271P-201ENST00000363858 PYGBP11216 843 aa5.75□□□□□ -1.49
RNU6-271P-201ENST00000363858 RNF25Q96BH1 459 aaPredicted RBP5.75□□□□□ -1.49
RNU6-271P-201ENST00000363858 RTN4Q9NQC3 1192 aaKnown RBP5.75□□□□□ -1.49
RNU6-271P-201ENST00000363858 MAP3K13O43283 966 aa5.74□□□□□ -1.49
RNU6-271P-201ENST00000363858 GALR2O43603 387 aaPredicted RBP5.74□□□□□ -1.49
RNU6-271P-201ENST00000363858 GABBR2O75899 941 aa5.74□□□□□ -1.49
RNU6-271P-201ENST00000363858 GSE1Q14687 1217 aa5.74□□□□□ -1.49
RNU6-271P-201ENST00000363858 MS4A3Q96HJ5 214 aa5.74□□□□□ -1.49
RNU6-271P-201ENST00000363858 CIZ1Q9ULV3 898 aaPredicted RBP5.74□□□□□ -1.49
RNU6-271P-201ENST00000363858 TRPC6Q9Y210 931 aa5.74□□□□□ -1.49
RNU6-271P-201ENST00000363858 PAK3O75914 559 aaPredicted RBP5.73□□□□□ -1.49
RNU6-271P-201ENST00000363858 CHRM1P11229 460 aaPredicted RBP5.72□□□□□ -1.49
RNU6-271P-201ENST00000363858 IFNL1Q8IU54 200 aa5.71□□□□□ -1.5
RNU6-271P-201ENST00000363858 RGL2O15211 777 aa5.7□□□□□ -1.5
RNU6-271P-201ENST00000363858 POTEIP0CG38 1075 aa5.7□□□□□ -1.5
RNU6-271P-201ENST00000363858 PCDHB8Q9UN66 801 aa5.7□□□□□ -1.5
RNU6-271P-201ENST00000363858 PCDHB13Q9Y5F0 798 aa5.7□□□□□ -1.5
RNU6-271P-201ENST00000363858 ECM2O94769 699 aaPredicted RBP5.67□□□□□ -1.5
RNU6-271P-201ENST00000363858 AMER1Q5JTC6 1135 aaPredicted RBP5.66□□□□□ -1.5
RNU6-271P-201ENST00000363858 TRIM41Q8WV44 630 aa5.66□□□□□ -1.5
RNU6-271P-201ENST00000363858 SGIP1Q9BQI5 828 aa5.66□□□□□ -1.5
RNU6-271P-201ENST00000363858 BMP2KQ9NSY1 1161 aaPredicted RBP5.65□□□□□ -1.5
RNU6-271P-201ENST00000363858 PELP1Q8IZL8 1130 aaKnown RBP5.64□□□□□ -1.51
RNU6-271P-201ENST00000363858 RIOK3O14730 519 aaKnown RBP5.63□□□□□ -1.51
RNU6-271P-201ENST00000363858 CLCN6P51797 869 aa5.63□□□□□ -1.51
RNU6-271P-201ENST00000363858 TTLL13PA6NNM8 815 aa5.62□□□□□ -1.51
RNU6-271P-201ENST00000363858 ATMINO43313 823 aaPredicted RBP5.62□□□□□ -1.51
RNU6-271P-201ENST00000363858 ASTLQ6HA08 431 aaPredicted RBP5.62□□□□□ -1.51
RNU6-271P-201ENST00000363858 ATN1P54259 1190 aaPredicted RBP5.61□□□□□ -1.51
RNU6-271P-201ENST00000363858 ZNF467Q7Z7K2 595 aaPredicted RBP5.61□□□□□ -1.51
RNU6-271P-201ENST00000363858 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.6□□□□□ -1.51
RNU6-271P-201ENST00000363858 TIE1P35590 1138 aa5.6□□□□□ -1.51
RNU6-271P-201ENST00000363858 PSEN1P49768 467 aa5.6□□□□□ -1.51
RNU6-271P-201ENST00000363858 ZFP91Q96JP5 570 aaPredicted RBP5.6□□□□□ -1.51
RNU6-271P-201ENST00000363858 TMEM106CQ9BVX2 250 aa5.59□□□□□ -1.51
RNU6-271P-201ENST00000363858 VGFO15240 615 aaPredicted RBP5.58□□□□□ -1.52
RNU6-271P-201ENST00000363858 PDAP1Q13442 181 aaKnown RBP5.58□□□□□ -1.52
RNU6-271P-201ENST00000363858 POTEFA5A3E0 1075 aa5.57□□□□□ -1.52
RNU6-271P-201ENST00000363858 TRIM35Q9UPQ4 493 aa5.56□□□□□ -1.52
RNU6-271P-201ENST00000363858 DCBLD2Q96PD2 775 aa5.55□□□□□ -1.52
RNU6-271P-201ENST00000363858 BCL11BQ9C0K0 894 aaPredicted RBP5.55□□□□□ -1.52
RNU6-271P-201ENST00000363858 NKX1-1Q15270 411 aaPredicted RBP5.54□□□□□ -1.52
RNU6-271P-201ENST00000363858 HS6ST3Q8IZP7 471 aa5.54□□□□□ -1.52
RNU6-271P-201ENST00000363858 ILDR1Q86SU0 546 aaPredicted RBP5.53□□□□□ -1.52
RNU6-271P-201ENST00000363858 CABP2Q9NPB3 220 aa5.53□□□□□ -1.52
RNU6-271P-201ENST00000363858 COLQQ9Y215 455 aaPredicted RBP5.53□□□□□ -1.52
RNU6-271P-201ENST00000363858 POTEB2H3BUK9 544 aa5.52□□□□□ -1.53
RNU6-271P-201ENST00000363858 STK25O00506 426 aa5.52□□□□□ -1.53
RNU6-271P-201ENST00000363858 IRX5P78411 483 aaPredicted RBP5.52□□□□□ -1.53
RNU6-271P-201ENST00000363858 EFCAB3Q8N7B9 438 aa5.52□□□□□ -1.53
RNU6-271P-201ENST00000363858 STK24Q9Y6E0 443 aa5.52□□□□□ -1.53
RNU6-271P-201ENST00000363858 POTEJP0CG39 1038 aa5.51□□□□□ -1.53
RNU6-271P-201ENST00000363858 CHGAP10645 457 aaKnown RBP5.51□□□□□ -1.53
RNU6-271P-201ENST00000363858 PDCD7Q8N8D1 485 aaKnown RBP5.51□□□□□ -1.53
RNU6-271P-201ENST00000363858 MS4A4AQ96JQ5 239 aa5.51□□□□□ -1.53
RNU6-271P-201ENST00000363858 DNAJC5Q9H3Z4 198 aa5.51□□□□□ -1.53
RNU6-271P-201ENST00000363858 METRNQ9UJH8 293 aa5.51□□□□□ -1.53
RNU6-271P-201ENST00000363858 MFRPQ9BY79 579 aa5.5□□□□□ -1.53
RNU6-271P-201ENST00000363858 FBXO22Q8NEZ5 403 aa5.49□□□□□ -1.53
RNU6-271P-201ENST00000363858 SLC39A7Q92504 469 aa5.49□□□□□ -1.53
RNU6-271P-201ENST00000363858 DCAF8L2P0C7V8 631 aa5.48□□□□□ -1.53
RNU6-271P-201ENST00000363858 IER5LQ5T953 404 aa5.48□□□□□ -1.53
RNU6-271P-201ENST00000363858 PHF8Q9UPP1 1060 aa5.48□□□□□ -1.53
RNU6-271P-201ENST00000363858 C7P10643 843 aa5.47□□□□□ -1.53
RNU6-271P-201ENST00000363858 DPY19L2Q6NUT2 758 aa5.47□□□□□ -1.53
RNU6-271P-201ENST00000363858 TAOK2Q9UL54 1235 aa5.45□□□□□ -1.54
RNU6-271P-201ENST00000363858 GTPBP6O43824 516 aaPredicted RBP5.44□□□□□ -1.54
RNU6-271P-201ENST00000363858 PPP1R37O75864 691 aa5.44□□□□□ -1.54
RNU6-271P-201ENST00000363858 MKRN3Q13064 507 aaKnown RBP5.44□□□□□ -1.54
RNU6-271P-201ENST00000363858 OCEL1Q9H607 264 aa5.44□□□□□ -1.54
RNU6-271P-201ENST00000363858 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.44□□□□□ -1.54
RNU6-271P-201ENST00000363858 SOX12O15370 315 aa5.43□□□□□ -1.54
RNU6-271P-201ENST00000363858 GOLGA2Q08379 1002 aa5.42□□□□□ -1.54
RNU6-271P-201ENST00000363858 PLCG2P16885 1265 aa5.41□□□□□ -1.54
RNU6-271P-201ENST00000363858 BBXQ8WY36 941 aaPredicted RBP5.41□□□□□ -1.54
RNU6-271P-201ENST00000363858 SEC24BO95487 1268 aa5.4□□□□□ -1.54
RNU6-271P-201ENST00000363858 NLRP6P59044 892 aa5.4□□□□□ -1.54
RNU6-271P-201ENST00000363858 LHX8Q68G74 356 aa5.39□□□□□ -1.55
RNU6-271P-201ENST00000363858 OTUD5Q96G74 571 aa5.39□□□□□ -1.55
RNU6-271P-201ENST00000363858 TMEM121BQ9BXQ6 578 aaPredicted RBP5.39□□□□□ -1.55
RNU6-271P-201ENST00000363858 TMEM92Q6UXU6 159 aa5.38□□□□□ -1.55
RNU6-271P-201ENST00000363858 MICALL2Q8IY33 904 aa5.37□□□□□ -1.55
RNU6-271P-201ENST00000363858 CADPS2Q86UW7 1296 aa5.36□□□□□ -1.55
RNU6-271P-201ENST00000363858 BOLA1Q9Y3E2 137 aa5.36□□□□□ -1.55
RNU6-271P-201ENST00000363858 PAXIP1Q6ZW49 1069 aaPredicted RBP5.34□□□□□ -1.55
RNU6-271P-201ENST00000363858 L3MBTL3Q96JM7 780 aaPredicted RBP5.32□□□□□ -1.56
RNU6-271P-201ENST00000363858 CFAP44Q96MT7 982 aa5.32□□□□□ -1.56
RNU6-271P-201ENST00000363858 NCKAP5LQ9HCH0 1330 aa5.31□□□□□ -1.56
RNU6-271P-201ENST00000363858 KIF3CO14782 793 aa5.31□□□□□ -1.56
RNU6-271P-201ENST00000363858 PLCB2Q00722 1185 aa5.31□□□□□ -1.56
RNU6-271P-201ENST00000363858 SPRYD3Q8NCJ5 442 aa5.31□□□□□ -1.56
RNU6-271P-201ENST00000363858 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.3□□□□□ -1.56
RNU6-271P-201ENST00000363858 TSHZ2Q9NRE2 1034 aa5.29□□□□□ -1.56
RNU6-271P-201ENST00000363858 CRISPLD2Q9H0B8 497 aa5.28□□□□□ -1.56
RNU6-271P-201ENST00000363858 SCUBE2Q9NQ36 999 aa5.28□□□□□ -1.56
RNU6-271P-201ENST00000363858 RYDENQ9NUL5 291 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms