RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 TPRNQ4KMQ1 711 aa10.08□□□□□ -0.8
RNU6-1339P-201ENST00000363574 SPDYE1Q8NFV5 336 aaPredicted RBP10.07□□□□□ -0.8
RNU6-1339P-201ENST00000363574 DCAF8Q5TAQ9 597 aa10.05□□□□□ -0.8
RNU6-1339P-201ENST00000363574 RIOK3O14730 519 aaKnown RBP10.04□□□□□ -0.8
RNU6-1339P-201ENST00000363574 CREBZFQ9NS37 354 aa10.04□□□□□ -0.8
RNU6-1339P-201ENST00000363574 MNX1P50219 401 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1339P-201ENST00000363574 NKX1-1Q15270 411 aaPredicted RBP10.03□□□□□ -0.8
RNU6-1339P-201ENST00000363574 AKT1S1Q96B36 256 aa10.03□□□□□ -0.8
RNU6-1339P-201ENST00000363574 RBM42Q9BTD8 480 aaKnown RBP10.01□□□□□ -0.81
RNU6-1339P-201ENST00000363574 FAM212AQ96EL1 285 aa10□□□□□ -0.81
RNU6-1339P-201ENST00000363574 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
RNU6-1339P-201ENST00000363574 PRR29P0C7W0 189 aa9.99□□□□□ -0.81
RNU6-1339P-201ENST00000363574 VGFO15240 615 aaPredicted RBP9.97□□□□□ -0.81
RNU6-1339P-201ENST00000363574 GTPBP6O43824 516 aaPredicted RBP9.97□□□□□ -0.81
RNU6-1339P-201ENST00000363574 CHRM1P11229 460 aaPredicted RBP9.96□□□□□ -0.82
RNU6-1339P-201ENST00000363574 RASEFQ8IZ41 740 aa9.96□□□□□ -0.82
RNU6-1339P-201ENST00000363574 STK25O00506 426 aa9.95□□□□□ -0.82
RNU6-1339P-201ENST00000363574 REM2Q8IYK8 340 aaPredicted RBP9.95□□□□□ -0.82
RNU6-1339P-201ENST00000363574 NBR1Q14596 966 aa9.93□□□□□ -0.82
RNU6-1339P-201ENST00000363574 SGIP1Q9BQI5 828 aa9.92□□□□□ -0.82
RNU6-1339P-201ENST00000363574 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.89□□□□□ -0.83
RNU6-1339P-201ENST00000363574 ZFP91Q96JP5 570 aaPredicted RBP9.89□□□□□ -0.83
RNU6-1339P-201ENST00000363574 BCL11BQ9C0K0 894 aaPredicted RBP9.88□□□□□ -0.83
RNU6-1339P-201ENST00000363574 PYGBP11216 843 aa9.87□□□□□ -0.83
RNU6-1339P-201ENST00000363574 STK24Q9Y6E0 443 aa9.87□□□□□ -0.83
RNU6-1339P-201ENST00000363574 PITPNM1O00562 1244 aa9.84□□□□□ -0.83
RNU6-1339P-201ENST00000363574 RYDENQ9NUL5 291 aaKnown RBP9.82□□□□□ -0.84
RNU6-1339P-201ENST00000363574 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
RNU6-1339P-201ENST00000363574 ZNF467Q7Z7K2 595 aaPredicted RBP9.72□□□□□ -0.85
RNU6-1339P-201ENST00000363574 TSPYL2Q9H2G4 693 aaPredicted RBP9.72□□□□□ -0.85
RNU6-1339P-201ENST00000363574 PDAP1Q13442 181 aaKnown RBP9.69□□□□□ -0.86
RNU6-1339P-201ENST00000363574 CADPS2Q86UW7 1296 aa9.68□□□□□ -0.86
RNU6-1339P-201ENST00000363574 P3H3Q8IVL6 736 aa9.68□□□□□ -0.86
RNU6-1339P-201ENST00000363574 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
RNU6-1339P-201ENST00000363574 PCDHB8Q9UN66 801 aa9.67□□□□□ -0.86
RNU6-1339P-201ENST00000363574 PCDHB13Q9Y5F0 798 aa9.67□□□□□ -0.86
RNU6-1339P-201ENST00000363574 CCDC61Q9Y6R9 512 aa9.64□□□□□ -0.87
RNU6-1339P-201ENST00000363574 ZNF579Q8NAF0 562 aaKnown RBP9.63□□□□□ -0.87
RNU6-1339P-201ENST00000363574 KCNV2Q8TDN2 545 aa9.63□□□□□ -0.87
RNU6-1339P-201ENST00000363574 PSEN1P49768 467 aa9.62□□□□□ -0.87
RNU6-1339P-201ENST00000363574 MFRPQ9BY79 579 aa9.62□□□□□ -0.87
RNU6-1339P-201ENST00000363574 WDR70Q9NW82 654 aa9.61□□□□□ -0.87
RNU6-1339P-201ENST00000363574 PRKAR2AP13861 404 aaKnown RBP9.58□□□□□ -0.88
RNU6-1339P-201ENST00000363574 PPP1R37O75864 691 aa9.54□□□□□ -0.88
RNU6-1339P-201ENST00000363574 FXR2P51116 673 aaKnown RBP eCLIP9.54□□□□□ -0.88
RNU6-1339P-201ENST00000363574 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.54□□□□□ -0.88
RNU6-1339P-201ENST00000363574 IFNL1Q8IU54 200 aa9.54□□□□□ -0.88
RNU6-1339P-201ENST00000363574 LMOD2Q6P5Q4 547 aa9.53□□□□□ -0.88
RNU6-1339P-201ENST00000363574 EFCAB3Q8N7B9 438 aa9.53□□□□□ -0.88
RNU6-1339P-201ENST00000363574 FBXO22Q8NEZ5 403 aa9.53□□□□□ -0.88
RNU6-1339P-201ENST00000363574 MAP3K13O43283 966 aa9.51□□□□□ -0.89
RNU6-1339P-201ENST00000363574 KIF12Q96FN5 646 aa9.51□□□□□ -0.89
RNU6-1339P-201ENST00000363574 NLRP6P59044 892 aa9.5□□□□□ -0.89
RNU6-1339P-201ENST00000363574 CABP2Q9NPB3 220 aa9.5□□□□□ -0.89
RNU6-1339P-201ENST00000363574 SOX12O15370 315 aa9.49□□□□□ -0.89
RNU6-1339P-201ENST00000363574 PAK3O75914 559 aaPredicted RBP9.49□□□□□ -0.89
RNU6-1339P-201ENST00000363574 PHF8Q9UPP1 1060 aa9.49□□□□□ -0.89
RNU6-1339P-201ENST00000363574 ARHGEF1Q92888 912 aaKnown RBP9.48□□□□□ -0.89
RNU6-1339P-201ENST00000363574 GTF3C3Q9Y5Q9 886 aa9.48□□□□□ -0.89
RNU6-1339P-201ENST00000363574 TIMELESSQ9UNS1 1208 aa9.47□□□□□ -0.89
RNU6-1339P-201ENST00000363574 TULP1O00294 542 aaPredicted RBP9.46□□□□□ -0.9
RNU6-1339P-201ENST00000363574 E2F4Q16254 413 aa9.46□□□□□ -0.9
RNU6-1339P-201ENST00000363574 TMEM132AQ24JP5 1023 aa9.46□□□□□ -0.9
RNU6-1339P-201ENST00000363574 PIP4P2Q8N4L2 257 aa9.42□□□□□ -0.9
RNU6-1339P-201ENST00000363574 NCKAP5LQ9HCH0 1330 aa9.41□□□□□ -0.9
RNU6-1339P-201ENST00000363574 TESPA1A2RU30 521 aaPredicted RBP9.4□□□□□ -0.9
RNU6-1339P-201ENST00000363574 SEMA3EO15041 775 aa9.4□□□□□ -0.9
RNU6-1339P-201ENST00000363574 MS4A4AQ96JQ5 239 aa9.4□□□□□ -0.9
RNU6-1339P-201ENST00000363574 ZC3H15Q8WU90 426 aaKnown RBP9.39□□□□□ -0.91
RNU6-1339P-201ENST00000363574 CHRDL2Q6WN34 429 aa9.38□□□□□ -0.91
RNU6-1339P-201ENST00000363574 ZRANB1Q9UGI0 708 aa9.38□□□□□ -0.91
RNU6-1339P-201ENST00000363574 MFSD10Q14728 455 aa9.37□□□□□ -0.91
RNU6-1339P-201ENST00000363574 LARP6Q9BRS8 491 aaKnown RBP9.37□□□□□ -0.91
RNU6-1339P-201ENST00000363574 PDE4AP27815 886 aa9.36□□□□□ -0.91
RNU6-1339P-201ENST00000363574 PHF12Q96QT6 1004 aa9.36□□□□□ -0.91
RNU6-1339P-201ENST00000363574 BRPF1P55201 1214 aaPredicted RBP9.35□□□□□ -0.91
RNU6-1339P-201ENST00000363574 CRISPLD2Q9H0B8 497 aa9.35□□□□□ -0.91
RNU6-1339P-201ENST00000363574 CD44P16070 742 aaKnown RBP9.34□□□□□ -0.91
RNU6-1339P-201ENST00000363574 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
RNU6-1339P-201ENST00000363574 TMEM106CQ9BVX2 250 aa9.32□□□□□ -0.92
RNU6-1339P-201ENST00000363574 ERICH6Q7L0X2 663 aa9.31□□□□□ -0.92
RNU6-1339P-201ENST00000363574 DDX27Q96GQ7 796 aaKnown RBP9.31□□□□□ -0.92
RNU6-1339P-201ENST00000363574 CAMK2BQ13554 666 aa9.3□□□□□ -0.92
RNU6-1339P-201ENST00000363574 SLC24A3Q9HC58 644 aa9.3□□□□□ -0.92
RNU6-1339P-201ENST00000363574 TRPC6Q9Y210 931 aa9.3□□□□□ -0.92
RNU6-1339P-201ENST00000363574 GOLGA2Q08379 1002 aa9.29□□□□□ -0.92
RNU6-1339P-201ENST00000363574 ZMYND10O75800 440 aa9.27□□□□□ -0.93
RNU6-1339P-201ENST00000363574 SMYD5Q6GMV2 418 aa9.27□□□□□ -0.93
RNU6-1339P-201ENST00000363574 MS4A3Q96HJ5 214 aa9.27□□□□□ -0.93
RNU6-1339P-201ENST00000363574 MKRN3Q13064 507 aaKnown RBP9.26□□□□□ -0.93
RNU6-1339P-201ENST00000363574 NEUROD2Q15784 382 aa9.26□□□□□ -0.93
RNU6-1339P-201ENST00000363574 ILDR1Q86SU0 546 aaPredicted RBP9.23□□□□□ -0.93
RNU6-1339P-201ENST00000363574 BARGINQ6ZT62 677 aa9.21□□□□□ -0.94
RNU6-1339P-201ENST00000363574 C14orf37Q86TY3 774 aa9.21□□□□□ -0.94
RNU6-1339P-201ENST00000363574 TTLL13PA6NNM8 815 aa9.2□□□□□ -0.94
RNU6-1339P-201ENST00000363574 TIE1P35590 1138 aa9.2□□□□□ -0.94
RNU6-1339P-201ENST00000363574 MLLT3P42568 568 aaPredicted RBP9.2□□□□□ -0.94
RNU6-1339P-201ENST00000363574 PPP1R15BQ5SWA1 713 aa9.2□□□□□ -0.94
RNU6-1339P-201ENST00000363574 GPHNQ9NQX3 736 aaPredicted RBP9.2□□□□□ -0.94
RNU6-1339P-201ENST00000363574 C19orf67A6NJJ6 358 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms