RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
CACNA1S-201ENST00000362061 BAZ1BQ9UIG0 1483 aaKnown RBP14.16□□□□□ -0.14
CACNA1S-201ENST00000362061 ANP32AP39687 249 aaKnown RBP14.15□□□□□ -0.14
CACNA1S-201ENST00000362061 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
CACNA1S-201ENST00000362061 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.14□□□□□ -0.15
CACNA1S-201ENST00000362061 MLECQ14165 292 aa14.13□□□□□ -0.15
CACNA1S-201ENST00000362061 CLIP1P30622 1438 aa14.12□□□□□ -0.15
CACNA1S-201ENST00000362061 PPM1GO15355 546 aaPredicted RBP14.11□□□□□ -0.15
CACNA1S-201ENST00000362061 MYH16Q9H6N6 1097 aa14.11□□□□□ -0.15
CACNA1S-201ENST00000362061 POGKQ9P215 609 aa14.09□□□□□ -0.15
CACNA1S-201ENST00000362061 CCDC180Q9P1Z9 1646 aa14.09□□□□□ -0.15
CACNA1S-201ENST00000362061 MRS2Q9HD23 443 aa14.08□□□□□ -0.16
CACNA1S-201ENST00000362061 NPHP1O15259 732 aa14.08□□□□□ -0.16
CACNA1S-201ENST00000362061 EIF4G2P78344 907 aaKnown RBP eCLIP14.05□□□□□ -0.16
CACNA1S-201ENST00000362061 CFAP53Q96M91 514 aa14.05□□□□□ -0.16
CACNA1S-201ENST00000362061 KIF27Q86VH2 1401 aa14.04□□□□□ -0.16
CACNA1S-201ENST00000362061 ANP32BQ92688 251 aaKnown RBP14.04□□□□□ -0.16
CACNA1S-201ENST00000362061 CDCA8Q53HL2 280 aa14.03□□□□□ -0.16
CACNA1S-201ENST00000362061 HIRIP3Q9BW71 556 aaPredicted RBP14.03□□□□□ -0.16
CACNA1S-201ENST00000362061 NACADO15069 1562 aa14.02□□□□□ -0.16
CACNA1S-201ENST00000362061 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.17
CACNA1S-201ENST00000362061 HDGFP51858 240 aaKnown RBP14.01□□□□□ -0.17
CACNA1S-201ENST00000362061 FKBP8Q14318 412 aa14.01□□□□□ -0.17
CACNA1S-201ENST00000362061 ACIN1Q9UKV3 1341 aaKnown RBP14.01□□□□□ -0.17
CACNA1S-201ENST00000362061 KNSTRNQ9Y448 316 aa13.99□□□□□ -0.17
CACNA1S-201ENST00000362061 CCDC136Q96JN2 1154 aa13.98□□□□□ -0.17
CACNA1S-201ENST00000362061 CARD11Q9BXL7 1154 aa13.96□□□□□ -0.18
CACNA1S-201ENST00000362061 CDK11BP21127 795 aaKnown RBP13.96□□□□□ -0.18
CACNA1S-201ENST00000362061 GOLGA3Q08378 1498 aa13.95□□□□□ -0.18
CACNA1S-201ENST00000362061 EEA1Q15075 1411 aa13.94□□□□□ -0.18
CACNA1S-201ENST00000362061 KANK1Q14678 1352 aa13.94□□□□□ -0.18
CACNA1S-201ENST00000362061 CCNB3Q8WWL7 1395 aa13.93□□□□□ -0.18
CACNA1S-201ENST00000362061 GGT6Q6P531 493 aa13.93□□□□□ -0.18
CACNA1S-201ENST00000362061 LAS1LQ9Y4W2 734 aaKnown RBP13.93□□□□□ -0.18
CACNA1S-201ENST00000362061 MAPK8IP3Q9UPT6 1336 aa13.93□□□□□ -0.18
CACNA1S-201ENST00000362061 EIF4G1Q04637 1599 aaKnown RBP13.93□□□□□ -0.18
CACNA1S-201ENST00000362061 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
CACNA1S-201ENST00000362061 SOX12O15370 315 aa13.9□□□□□ -0.18
CACNA1S-201ENST00000362061 NEUROD2Q15784 382 aa13.9□□□□□ -0.18
CACNA1S-201ENST00000362061 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
CACNA1S-201ENST00000362061 CEP162Q5TB80 1403 aa13.86□□□□□ -0.19
CACNA1S-201ENST00000362061 SRPK2P78362 688 aaKnown RBP13.85□□□□□ -0.19
CACNA1S-201ENST00000362061 SAFB2Q14151 953 aaKnown RBP eCLIP13.85□□□□□ -0.19
CACNA1S-201ENST00000362061 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
CACNA1S-201ENST00000362061 CARMIL1Q5VZK9 1371 aa13.84□□□□□ -0.19
CACNA1S-201ENST00000362061 SENP3-EIF4A1A0A087X0R7 540 aa13.83□□□□□ -0.19
CACNA1S-201ENST00000362061 FTSJ3Q8IY81 847 aaKnown RBP13.83□□□□□ -0.19
CACNA1S-201ENST00000362061 CUX2O14529 1486 aa13.83□□□□□ -0.2
CACNA1S-201ENST00000362061 TULP1O00294 542 aaPredicted RBP13.83□□□□□ -0.2
CACNA1S-201ENST00000362061 PDS5BQ9NTI5 1447 aa13.83□□□□□ -0.2
CACNA1S-201ENST00000362061 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
CACNA1S-201ENST00000362061 CARMIL2Q6F5E8 1435 aa13.82□□□□□ -0.2
CACNA1S-201ENST00000362061 DCAF1Q9Y4B6 1507 aa13.82□□□□□ -0.2
CACNA1S-201ENST00000362061 CEP164Q9UPV0 1460 aa13.82□□□□□ -0.2
CACNA1S-201ENST00000362061 STK26Q9P289 416 aa13.81□□□□□ -0.2
CACNA1S-201ENST00000362061 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
CACNA1S-201ENST00000362061 IRX6P78412 446 aaPredicted RBP13.8□□□□□ -0.2
CACNA1S-201ENST00000362061 DCAF11Q8TEB1 546 aa13.8□□□□□ -0.2
CACNA1S-201ENST00000362061 CCDC9Q9Y3X0 531 aaKnown RBP13.8□□□□□ -0.2
CACNA1S-201ENST00000362061 OS9Q13438 667 aaPredicted RBP13.79□□□□□ -0.2
CACNA1S-201ENST00000362061 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
CACNA1S-201ENST00000362061 BAZ1AQ9NRL2 1556 aaPredicted RBP13.78□□□□□ -0.2
CACNA1S-201ENST00000362061 PNNQ9H307 717 aaKnown RBP13.78□□□□□ -0.2
CACNA1S-201ENST00000362061 CASC1Q6TDU7 716 aa13.77□□□□□ -0.2
CACNA1S-201ENST00000362061 CC2D1BQ5T0F9 858 aaKnown RBP13.77□□□□□ -0.21
CACNA1S-201ENST00000362061 EFCAB2Q5VUJ9 269 aa13.77□□□□□ -0.21
CACNA1S-201ENST00000362061 CECR2Q9BXF3 1484 aa13.77□□□□□ -0.21
CACNA1S-201ENST00000362061 FHAD1B1AJZ9 1412 aa13.77□□□□□ -0.21
CACNA1S-201ENST00000362061 NCLP19338 710 aaKnown RBP13.76□□□□□ -0.21
CACNA1S-201ENST00000362061 TMF1P82094 1093 aa13.76□□□□□ -0.21
CACNA1S-201ENST00000362061 TAOK2Q9UL54 1235 aa13.75□□□□□ -0.21
CACNA1S-201ENST00000362061 AEBP2Q6ZN18 517 aaPredicted RBP13.74□□□□□ -0.21
CACNA1S-201ENST00000362061 TNIKQ9UKE5 1360 aa13.74□□□□□ -0.21
CACNA1S-201ENST00000362061 TDRD9Q8NDG6 1382 aaKnown RBP13.73□□□□□ -0.21
CACNA1S-201ENST00000362061 EID1Q9Y6B2 187 aa13.73□□□□□ -0.21
CACNA1S-201ENST00000362061 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
CACNA1S-201ENST00000362061 ZRSR1Q15695 479 aaKnown RBP13.72□□□□□ -0.21
CACNA1S-201ENST00000362061 HDGFL2Q7Z4V5 671 aaPredicted RBP13.72□□□□□ -0.21
CACNA1S-201ENST00000362061 SIN3AQ96ST3 1273 aa13.71□□□□□ -0.21
CACNA1S-201ENST00000362061 RTF1Q92541 710 aaKnown RBP13.71□□□□□ -0.21
CACNA1S-201ENST00000362061 SOGA1O94964 1423 aa13.71□□□□□ -0.21
CACNA1S-201ENST00000362061 MORC1Q86VD1 984 aa13.7□□□□□ -0.22
CACNA1S-201ENST00000362061 ZNF330Q9Y3S2 320 aaPredicted RBP13.7□□□□□ -0.22
CACNA1S-201ENST00000362061 FGD1P98174 961 aa13.69□□□□□ -0.22
CACNA1S-201ENST00000362061 CHMP4BQ9H444 224 aaKnown RBP13.69□□□□□ -0.22
CACNA1S-201ENST00000362061 BECN1Q14457 450 aa13.69□□□□□ -0.22
CACNA1S-201ENST00000362061 KIF3BO15066 747 aa13.68□□□□□ -0.22
CACNA1S-201ENST00000362061 CYB5RLQ6IPT4 315 aa13.68□□□□□ -0.22
CACNA1S-201ENST00000362061 MIER1Q8N108 512 aa13.68□□□□□ -0.22
CACNA1S-201ENST00000362061 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
CACNA1S-201ENST00000362061 ISY1Q9ULR0 285 aaKnown RBP13.67□□□□□ -0.22
CACNA1S-201ENST00000362061 KCNJ4P48050 445 aa13.67□□□□□ -0.22
CACNA1S-201ENST00000362061 PKD2Q13563 968 aa13.66□□□□□ -0.22
CACNA1S-201ENST00000362061 TPRNQ4KMQ1 711 aa13.66□□□□□ -0.22
CACNA1S-201ENST00000362061 EIF5BO60841 1220 aaKnown RBP13.66□□□□□ -0.22
CACNA1S-201ENST00000362061 NAP1L2Q9ULW6 460 aaPredicted RBP13.65□□□□□ -0.22
CACNA1S-201ENST00000362061 GOLGA6L22H0YM25 854 aa13.65□□□□□ -0.22
CACNA1S-201ENST00000362061 MS4A1P11836 297 aa13.64□□□□□ -0.23
CACNA1S-201ENST00000362061 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
CACNA1S-201ENST00000362061 NBR1Q14596 966 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms