RNA–Protein interactions for RNA: ENST00000361303.7

LDLRAD4-202, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 1 (best)

Gene LDLRAD4, Length 8,086 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-202ENST00000361303 NACADO15069 1562 aa14.29□□□□□ -0.12
LDLRAD4-202ENST00000361303 CFAP53Q96M91 514 aa14.26□□□□□ -0.13
LDLRAD4-202ENST00000361303 SALL2Q9Y467 1007 aaPredicted RBP14.26□□□□□ -0.13
LDLRAD4-202ENST00000361303 BAZ1BQ9UIG0 1483 aaKnown RBP14.26□□□□□ -0.13
LDLRAD4-202ENST00000361303 EIF5BO60841 1220 aaKnown RBP14.23□□□□□ -0.13
LDLRAD4-202ENST00000361303 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
LDLRAD4-202ENST00000361303 CLIP1P30622 1438 aa14.23□□□□□ -0.13
LDLRAD4-202ENST00000361303 PLEKHG5O94827 1062 aa14.23□□□□□ -0.13
LDLRAD4-202ENST00000361303 EEA1Q15075 1411 aa14.23□□□□□ -0.13
LDLRAD4-202ENST00000361303 CCDC136Q96JN2 1154 aa14.22□□□□□ -0.13
LDLRAD4-202ENST00000361303 EIF4G2P78344 907 aaKnown RBP eCLIP14.21□□□□□ -0.14
LDLRAD4-202ENST00000361303 MRS2Q9HD23 443 aa14.2□□□□□ -0.14
LDLRAD4-202ENST00000361303 FKBP8Q14318 412 aa14.2□□□□□ -0.14
LDLRAD4-202ENST00000361303 NPHP1O15259 732 aa14.18□□□□□ -0.14
LDLRAD4-202ENST00000361303 HDGFP51858 240 aaKnown RBP14.18□□□□□ -0.14
LDLRAD4-202ENST00000361303 ARXQ96QS3 562 aa14.18□□□□□ -0.14
LDLRAD4-202ENST00000361303 CFDP1Q9UEE9 299 aaPredicted RBP14.18□□□□□ -0.14
LDLRAD4-202ENST00000361303 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
LDLRAD4-202ENST00000361303 DCAF1Q9Y4B6 1507 aa14.17□□□□□ -0.14
LDLRAD4-202ENST00000361303 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
LDLRAD4-202ENST00000361303 CASC1Q6TDU7 716 aa14.16□□□□□ -0.14
LDLRAD4-202ENST00000361303 RRP7BPQ9NSQ0 103 aa14.16□□□□□ -0.14
LDLRAD4-202ENST00000361303 NCLP19338 710 aaKnown RBP14.16□□□□□ -0.14
LDLRAD4-202ENST00000361303 KNSTRNQ9Y448 316 aa14.15□□□□□ -0.14
LDLRAD4-202ENST00000361303 POGKQ9P215 609 aa14.13□□□□□ -0.15
LDLRAD4-202ENST00000361303 KANK1Q14678 1352 aa14.13□□□□□ -0.15
LDLRAD4-202ENST00000361303 TRHP20396 242 aaPredicted RBP14.13□□□□□ -0.15
LDLRAD4-202ENST00000361303 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
LDLRAD4-202ENST00000361303 LMOD2Q6P5Q4 547 aa14.11□□□□□ -0.15
LDLRAD4-202ENST00000361303 BECN1Q14457 450 aa14.11□□□□□ -0.15
LDLRAD4-202ENST00000361303 NUDCQ9Y266 331 aa14.11□□□□□ -0.15
LDLRAD4-202ENST00000361303 PNNQ9H307 717 aaKnown RBP14.11□□□□□ -0.15
LDLRAD4-202ENST00000361303 ZRSR1Q15695 479 aaKnown RBP14.1□□□□□ -0.15
LDLRAD4-202ENST00000361303 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
LDLRAD4-202ENST00000361303 MAPK8IP3Q9UPT6 1336 aa14.1□□□□□ -0.15
LDLRAD4-202ENST00000361303 PPM1GO15355 546 aaPredicted RBP14.09□□□□□ -0.15
LDLRAD4-202ENST00000361303 CHMP4BQ9H444 224 aaKnown RBP14.09□□□□□ -0.15
LDLRAD4-202ENST00000361303 WRNQ14191 1432 aaPredicted RBP eCLIP14.07□□□□□ -0.16
LDLRAD4-202ENST00000361303 GOLGA6L22H0YM25 854 aa14.07□□□□□ -0.16
LDLRAD4-202ENST00000361303 FTSJ3Q8IY81 847 aaKnown RBP14.07□□□□□ -0.16
LDLRAD4-202ENST00000361303 ANP32EQ9BTT0 268 aa14.06□□□□□ -0.16
LDLRAD4-202ENST00000361303 DDRGK1Q96HY6 314 aa14.05□□□□□ -0.16
LDLRAD4-202ENST00000361303 CEP164Q9UPV0 1460 aa14.04□□□□□ -0.16
LDLRAD4-202ENST00000361303 GOLGA2Q08379 1002 aa14.04□□□□□ -0.16
LDLRAD4-202ENST00000361303 CARD11Q9BXL7 1154 aa14.02□□□□□ -0.16
LDLRAD4-202ENST00000361303 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.17
LDLRAD4-202ENST00000361303 CCNB3Q8WWL7 1395 aa14.01□□□□□ -0.17
LDLRAD4-202ENST00000361303 FHAD1B1AJZ9 1412 aa14.01□□□□□ -0.17
LDLRAD4-202ENST00000361303 BAZ1AQ9NRL2 1556 aaPredicted RBP14□□□□□ -0.17
LDLRAD4-202ENST00000361303 MS4A1P11836 297 aa14□□□□□ -0.17
LDLRAD4-202ENST00000361303 GLIPR1L2Q4G1C9 344 aa14□□□□□ -0.17
LDLRAD4-202ENST00000361303 LAS1LQ9Y4W2 734 aaKnown RBP13.98□□□□□ -0.17
LDLRAD4-202ENST00000361303 CEP162Q5TB80 1403 aa13.97□□□□□ -0.17
LDLRAD4-202ENST00000361303 OS9Q13438 667 aaPredicted RBP13.97□□□□□ -0.17
LDLRAD4-202ENST00000361303 CARMIL2Q6F5E8 1435 aa13.94□□□□□ -0.18
LDLRAD4-202ENST00000361303 TRIM44Q96DX7 344 aaPredicted RBP13.92□□□□□ -0.18
LDLRAD4-202ENST00000361303 TULP1O00294 542 aaPredicted RBP13.92□□□□□ -0.18
LDLRAD4-202ENST00000361303 FGD1P98174 961 aa13.92□□□□□ -0.18
LDLRAD4-202ENST00000361303 MLECQ14165 292 aa13.92□□□□□ -0.18
LDLRAD4-202ENST00000361303 TMF1P82094 1093 aa13.91□□□□□ -0.18
LDLRAD4-202ENST00000361303 TMX4Q9H1E5 349 aaPredicted RBP13.89□□□□□ -0.19
LDLRAD4-202ENST00000361303 GOLGA6L6A8MZA4 724 aa13.89□□□□□ -0.19
LDLRAD4-202ENST00000361303 U2SURPO15042 1029 aaKnown RBP13.89□□□□□ -0.19
LDLRAD4-202ENST00000361303 SRPK2P78362 688 aaKnown RBP13.89□□□□□ -0.19
LDLRAD4-202ENST00000361303 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
LDLRAD4-202ENST00000361303 KCNJ4P48050 445 aa13.88□□□□□ -0.19
LDLRAD4-202ENST00000361303 PDS5BQ9NTI5 1447 aa13.88□□□□□ -0.19
LDLRAD4-202ENST00000361303 NBR1Q14596 966 aa13.87□□□□□ -0.19
LDLRAD4-202ENST00000361303 NEUROD2Q15784 382 aa13.87□□□□□ -0.19
LDLRAD4-202ENST00000361303 TNIKQ9UKE5 1360 aa13.87□□□□□ -0.19
LDLRAD4-202ENST00000361303 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
LDLRAD4-202ENST00000361303 CFAP44Q96MT7 982 aa13.86□□□□□ -0.19
LDLRAD4-202ENST00000361303 PTMAP06454 111 aaKnown RBP13.85□□□□□ -0.19
LDLRAD4-202ENST00000361303 SMARCA2P51531 1590 aa13.85□□□□□ -0.19
LDLRAD4-202ENST00000361303 CHMP4AQ9BY43 222 aa13.85□□□□□ -0.19
LDLRAD4-202ENST00000361303 CUX2O14529 1486 aa13.85□□□□□ -0.19
LDLRAD4-202ENST00000361303 HDGFL2Q7Z4V5 671 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-202ENST00000361303 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
LDLRAD4-202ENST00000361303 CARMIL1Q5VZK9 1371 aa13.83□□□□□ -0.2
LDLRAD4-202ENST00000361303 NRDCO43847 1150 aa13.83□□□□□ -0.2
LDLRAD4-202ENST00000361303 IRX6P78412 446 aaPredicted RBP13.81□□□□□ -0.2
LDLRAD4-202ENST00000361303 MCCP23508 829 aa13.81□□□□□ -0.2
LDLRAD4-202ENST00000361303 NAP1L2Q9ULW6 460 aaPredicted RBP13.81□□□□□ -0.2
LDLRAD4-202ENST00000361303 CALD1Q05682 793 aaKnown RBP13.81□□□□□ -0.2
LDLRAD4-202ENST00000361303 DCAF11Q8TEB1 546 aa13.81□□□□□ -0.2
LDLRAD4-202ENST00000361303 FRAT1Q92837 279 aaPredicted RBP13.8□□□□□ -0.2
LDLRAD4-202ENST00000361303 MORC1Q86VD1 984 aa13.8□□□□□ -0.2
LDLRAD4-202ENST00000361303 ARHGAP35Q9NRY4 1499 aa13.79□□□□□ -0.2
LDLRAD4-202ENST00000361303 CC2D1BQ5T0F9 858 aaKnown RBP13.79□□□□□ -0.2
LDLRAD4-202ENST00000361303 GGT6Q6P531 493 aa13.79□□□□□ -0.2
LDLRAD4-202ENST00000361303 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
LDLRAD4-202ENST00000361303 EID1Q9Y6B2 187 aa13.78□□□□□ -0.2
LDLRAD4-202ENST00000361303 PAK3O75914 559 aaPredicted RBP13.78□□□□□ -0.2
LDLRAD4-202ENST00000361303 SOX12O15370 315 aa13.77□□□□□ -0.2
LDLRAD4-202ENST00000361303 EIF3AQ14152 1382 aaKnown RBP13.77□□□□□ -0.2
LDLRAD4-202ENST00000361303 ISY1Q9ULR0 285 aaKnown RBP13.77□□□□□ -0.21
LDLRAD4-202ENST00000361303 HSP90AB1P08238 724 aaKnown RBP13.76□□□□□ -0.21
LDLRAD4-202ENST00000361303 CLSTN1O94985 981 aa13.76□□□□□ -0.21
LDLRAD4-202ENST00000361303 EFCAB2Q5VUJ9 269 aa13.76□□□□□ -0.21
LDLRAD4-202ENST00000361303 GOLGA6L4A6NEF3 574 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms