RNA–Protein interactions for RNA: ENST00000361246.6

CDC42BPB-201, Transcript of CDC42 binding protein kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPB, Length 6,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-201ENST00000361246 MTUS2Q5JR59 1369 aa27.3■■□□□ 1.96
CDC42BPB-201ENST00000361246 IRX6P78412 446 aaPredicted RBP27.28■■□□□ 1.96
CDC42BPB-201ENST00000361246 MLECQ14165 292 aa27.27■■□□□ 1.96
CDC42BPB-201ENST00000361246 TAOK2Q9UL54 1235 aa27.24■■□□□ 1.95
CDC42BPB-201ENST00000361246 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
CDC42BPB-201ENST00000361246 NPHP1O15259 732 aa27.19■■□□□ 1.94
CDC42BPB-201ENST00000361246 TPRNQ4KMQ1 711 aa27.18■■□□□ 1.94
CDC42BPB-201ENST00000361246 UPF2Q9HAU5 1272 aaKnown RBP27.18■■□□□ 1.94
CDC42BPB-201ENST00000361246 LAS1LQ9Y4W2 734 aaKnown RBP27.14■■□□□ 1.93
CDC42BPB-201ENST00000361246 PLEKHD1A6NEE1 506 aa27.11■■□□□ 1.93
CDC42BPB-201ENST00000361246 MRS2Q9HD23 443 aa27.1■■□□□ 1.93
CDC42BPB-201ENST00000361246 SOX12O15370 315 aa27.09■■□□□ 1.93
CDC42BPB-201ENST00000361246 TNNT2P45379 298 aaPredicted RBP27.09■■□□□ 1.93
CDC42BPB-201ENST00000361246 ANP32BQ92688 251 aaKnown RBP27.08■■□□□ 1.93
CDC42BPB-201ENST00000361246 MYH16Q9H6N6 1097 aa27.05■■□□□ 1.92
CDC42BPB-201ENST00000361246 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.04■■□□□ 1.92
CDC42BPB-201ENST00000361246 CCDC136Q96JN2 1154 aa27.03■■□□□ 1.92
CDC42BPB-201ENST00000361246 NBR1Q14596 966 aa27.02■■□□□ 1.92
CDC42BPB-201ENST00000361246 NEUROD2Q15784 382 aa27.01■■□□□ 1.91
CDC42BPB-201ENST00000361246 POGKQ9P215 609 aa26.94■■□□□ 1.9
CDC42BPB-201ENST00000361246 ACIN1Q9UKV3 1341 aaKnown RBP26.9■■□□□ 1.9
CDC42BPB-201ENST00000361246 CFDP1Q9UEE9 299 aaPredicted RBP26.9■■□□□ 1.9
CDC42BPB-201ENST00000361246 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
CDC42BPB-201ENST00000361246 SAFB2Q14151 953 aaKnown RBP eCLIP26.9■■□□□ 1.9
CDC42BPB-201ENST00000361246 CDK11BP21127 795 aaKnown RBP26.89■■□□□ 1.9
CDC42BPB-201ENST00000361246 EIF5BO60841 1220 aaKnown RBP26.89■■□□□ 1.89
CDC42BPB-201ENST00000361246 EIF4G1Q04637 1599 aaKnown RBP26.83■■□□□ 1.89
CDC42BPB-201ENST00000361246 RB1CC1Q8TDY2 1594 aa26.82■■□□□ 1.88
CDC42BPB-201ENST00000361246 EIF4G2P78344 907 aaKnown RBP eCLIP26.79■■□□□ 1.88
CDC42BPB-201ENST00000361246 CLIP1P30622 1438 aa26.78■■□□□ 1.88
CDC42BPB-201ENST00000361246 NCBP3Q53F19 620 aaKnown RBP26.77■■□□□ 1.88
CDC42BPB-201ENST00000361246 CC2D1BQ5T0F9 858 aaKnown RBP26.76■■□□□ 1.87
CDC42BPB-201ENST00000361246 KNSTRNQ9Y448 316 aa26.74■■□□□ 1.87
CDC42BPB-201ENST00000361246 CARD11Q9BXL7 1154 aa26.73■■□□□ 1.87
CDC42BPB-201ENST00000361246 U2SURPO15042 1029 aaKnown RBP26.72■■□□□ 1.87
CDC42BPB-201ENST00000361246 CFAP53Q96M91 514 aa26.71■■□□□ 1.87
CDC42BPB-201ENST00000361246 STK26Q9P289 416 aa26.7■■□□□ 1.87
CDC42BPB-201ENST00000361246 BAZ1BQ9UIG0 1483 aaKnown RBP26.7■■□□□ 1.86
CDC42BPB-201ENST00000361246 FTSJ3Q8IY81 847 aaKnown RBP26.67■■□□□ 1.86
CDC42BPB-201ENST00000361246 PAK3O75914 559 aaPredicted RBP26.66■■□□□ 1.86
CDC42BPB-201ENST00000361246 NCLP19338 710 aaKnown RBP26.65■■□□□ 1.86
CDC42BPB-201ENST00000361246 GGT6Q6P531 493 aa26.65■■□□□ 1.86
CDC42BPB-201ENST00000361246 NAP1L2Q9ULW6 460 aaPredicted RBP26.64■■□□□ 1.86
CDC42BPB-201ENST00000361246 MIER1Q8N108 512 aa26.64■■□□□ 1.85
CDC42BPB-201ENST00000361246 RSF1Q96T23 1441 aaPredicted RBP26.63■■□□□ 1.85
CDC42BPB-201ENST00000361246 MAPK8IP3Q9UPT6 1336 aa26.63■■□□□ 1.85
CDC42BPB-201ENST00000361246 OS9Q13438 667 aaPredicted RBP26.63■■□□□ 1.85
CDC42BPB-201ENST00000361246 CCDC9Q9Y3X0 531 aaKnown RBP26.62■■□□□ 1.85
CDC42BPB-201ENST00000361246 FRAT1Q92837 279 aaPredicted RBP26.61■■□□□ 1.85
CDC42BPB-201ENST00000361246 GOLGA2Q08379 1002 aa26.61■■□□□ 1.85
CDC42BPB-201ENST00000361246 ZNF330Q9Y3S2 320 aaPredicted RBP26.61■■□□□ 1.85
CDC42BPB-201ENST00000361246 SRPK2P78362 688 aaKnown RBP26.59■■□□□ 1.85
CDC42BPB-201ENST00000361246 ISY1Q9ULR0 285 aaKnown RBP26.58■■□□□ 1.85
CDC42BPB-201ENST00000361246 SIN3AQ96ST3 1273 aa26.54■■□□□ 1.84
CDC42BPB-201ENST00000361246 AMER1Q5JTC6 1135 aaPredicted RBP26.51■■□□□ 1.83
CDC42BPB-201ENST00000361246 NUTM2DQ5VT03 806 aaPredicted RBP26.5■■□□□ 1.83
CDC42BPB-201ENST00000361246 DCAF11Q8TEB1 546 aa26.49■■□□□ 1.83
CDC42BPB-201ENST00000361246 CLSTN1O94985 981 aa26.48■■□□□ 1.83
CDC42BPB-201ENST00000361246 CSB-PGBD3P0DP91 1061 aa26.45■■□□□ 1.82
CDC42BPB-201ENST00000361246 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.44■■□□□ 1.82
CDC42BPB-201ENST00000361246 NUDCQ9Y266 331 aa26.44■■□□□ 1.82
CDC42BPB-201ENST00000361246 CASC1Q6TDU7 716 aa26.43■■□□□ 1.82
CDC42BPB-201ENST00000361246 CDCA8Q53HL2 280 aa26.42■■□□□ 1.82
CDC42BPB-201ENST00000361246 GOLGA3Q08378 1498 aa26.42■■□□□ 1.82
CDC42BPB-201ENST00000361246 CEP162Q5TB80 1403 aa26.41■■□□□ 1.82
CDC42BPB-201ENST00000361246 FOXD1Q16676 465 aa26.41■■□□□ 1.82
CDC42BPB-201ENST00000361246 FGD1P98174 961 aa26.41■■□□□ 1.82
CDC42BPB-201ENST00000361246 CCDC180Q9P1Z9 1646 aa26.4■■□□□ 1.82
CDC42BPB-201ENST00000361246 WRNQ14191 1432 aaPredicted RBP eCLIP26.4■■□□□ 1.82
CDC42BPB-201ENST00000361246 ZRSR1Q15695 479 aaKnown RBP26.4■■□□□ 1.82
CDC42BPB-201ENST00000361246 RGS3P49796 1198 aa26.4■■□□□ 1.82
CDC42BPB-201ENST00000361246 KIF27Q86VH2 1401 aa26.39■■□□□ 1.81
CDC42BPB-201ENST00000361246 CCNB3Q8WWL7 1395 aa26.38■■□□□ 1.81
CDC42BPB-201ENST00000361246 KCNJ4P48050 445 aa26.37■■□□□ 1.81
CDC42BPB-201ENST00000361246 NUTM2FA1L443 756 aa26.37■■□□□ 1.81
CDC42BPB-201ENST00000361246 KANK1Q14678 1352 aa26.36■■□□□ 1.81
CDC42BPB-201ENST00000361246 APBB1O00213 710 aa26.36■■□□□ 1.81
CDC42BPB-201ENST00000361246 SUPT16HQ9Y5B9 1047 aaKnown RBP26.34■■□□□ 1.81
CDC42BPB-201ENST00000361246 PLCB2Q00722 1185 aa26.34■■□□□ 1.81
CDC42BPB-201ENST00000361246 BECN1Q14457 450 aa26.29■■□□□ 1.8
CDC42BPB-201ENST00000361246 HDGFP51858 240 aaKnown RBP26.28■■□□□ 1.8
CDC42BPB-201ENST00000361246 RTF1Q92541 710 aaKnown RBP26.25■■□□□ 1.79
CDC42BPB-201ENST00000361246 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
CDC42BPB-201ENST00000361246 DCAF1Q9Y4B6 1507 aa26.25■■□□□ 1.79
CDC42BPB-201ENST00000361246 MORC1Q86VD1 984 aa26.24■■□□□ 1.79
CDC42BPB-201ENST00000361246 PTMAP06454 111 aaKnown RBP26.23■■□□□ 1.79
CDC42BPB-201ENST00000361246 SPRYD3Q8NCJ5 442 aa26.22■■□□□ 1.79
CDC42BPB-201ENST00000361246 AEBP2Q6ZN18 517 aaPredicted RBP26.22■■□□□ 1.79
CDC42BPB-201ENST00000361246 CUX2O14529 1486 aa26.21■■□□□ 1.79
CDC42BPB-201ENST00000361246 TMF1P82094 1093 aa26.2■■□□□ 1.78
CDC42BPB-201ENST00000361246 LTV1Q96GA3 475 aaPredicted RBP26.18■■□□□ 1.78
CDC42BPB-201ENST00000361246 GOLGA6L22H0YM25 854 aa26.17■■□□□ 1.78
CDC42BPB-201ENST00000361246 CHMP3Q9Y3E7 222 aa26.16■■□□□ 1.78
CDC42BPB-201ENST00000361246 TRIM44Q96DX7 344 aaPredicted RBP26.16■■□□□ 1.78
CDC42BPB-201ENST00000361246 CECR2Q9BXF3 1484 aa26.16■■□□□ 1.78
CDC42BPB-201ENST00000361246 DNTTIP2Q5QJE6 756 aaKnown RBP26.12■■□□□ 1.77
CDC42BPB-201ENST00000361246 HSP90AB1P08238 724 aaKnown RBP26.12■■□□□ 1.77
CDC42BPB-201ENST00000361246 DDRGK1Q96HY6 314 aa26.1■■□□□ 1.77
CDC42BPB-201ENST00000361246 CARMIL1Q5VZK9 1371 aa26.09■■□□□ 1.77
CDC42BPB-201ENST00000361246 HDGFL2Q7Z4V5 671 aaPredicted RBP26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms