RNA–Protein interactions for RNA: ENST00000360105.8

NFIX-202, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 5,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-202ENST00000360105 CLIP1P30622 1438 aa26.05■■□□□ 1.76
NFIX-202ENST00000360105 SALL2Q9Y467 1007 aaPredicted RBP26.05■■□□□ 1.76
NFIX-202ENST00000360105 NACADO15069 1562 aa26.04■■□□□ 1.76
NFIX-202ENST00000360105 DDX10Q13206 875 aaKnown RBP26.01■■□□□ 1.75
NFIX-202ENST00000360105 SENP3Q9H4L4 574 aaPredicted RBP26.01■■□□□ 1.75
NFIX-202ENST00000360105 TRHP20396 242 aaPredicted RBP26■■□□□ 1.75
NFIX-202ENST00000360105 RRP7BPQ9NSQ0 103 aa26■■□□□ 1.75
NFIX-202ENST00000360105 CFDP1Q9UEE9 299 aaPredicted RBP26■■□□□ 1.75
NFIX-202ENST00000360105 EEA1Q15075 1411 aa25.97■■□□□ 1.75
NFIX-202ENST00000360105 CDCA8Q53HL2 280 aa25.97■■□□□ 1.75
NFIX-202ENST00000360105 CFAP53Q96M91 514 aa25.94■■□□□ 1.74
NFIX-202ENST00000360105 KIF27Q86VH2 1401 aa25.93■■□□□ 1.74
NFIX-202ENST00000360105 EIF4G2P78344 907 aaKnown RBP eCLIP25.91■■□□□ 1.742e-6■■■■■ 26.9
NFIX-202ENST00000360105 MRS2Q9HD23 443 aa25.9■■□□□ 1.74
NFIX-202ENST00000360105 GOLGA3Q08378 1498 aa25.89■■□□□ 1.73
NFIX-202ENST00000360105 RGL3Q3MIN7 710 aa25.86■■□□□ 1.73
NFIX-202ENST00000360105 WRNQ14191 1432 aaPredicted RBP eCLIP25.85■■□□□ 1.73
NFIX-202ENST00000360105 CDK11BP21127 795 aaKnown RBP25.84■■□□□ 1.73
NFIX-202ENST00000360105 ARXQ96QS3 562 aa25.84■■□□□ 1.73
NFIX-202ENST00000360105 HDGFP51858 240 aaKnown RBP25.83■■□□□ 1.73
NFIX-202ENST00000360105 LMOD2Q6P5Q4 547 aa25.82■■□□□ 1.72
NFIX-202ENST00000360105 POGKQ9P215 609 aa25.82■■□□□ 1.72
NFIX-202ENST00000360105 FKBP8Q14318 412 aa25.81■■□□□ 1.72
NFIX-202ENST00000360105 CCDC136Q96JN2 1154 aa25.8■■□□□ 1.72
NFIX-202ENST00000360105 KNSTRNQ9Y448 316 aa25.75■■□□□ 1.71
NFIX-202ENST00000360105 DCAF1Q9Y4B6 1507 aa25.75■■□□□ 1.71
NFIX-202ENST00000360105 NPHP1O15259 732 aa25.74■■□□□ 1.71
NFIX-202ENST00000360105 KANK1Q14678 1352 aa25.74■■□□□ 1.71
NFIX-202ENST00000360105 PPM1GO15355 546 aaPredicted RBP25.73■■□□□ 1.71
NFIX-202ENST00000360105 NUDCQ9Y266 331 aa25.68■■□□□ 1.7
NFIX-202ENST00000360105 MAPK8IP3Q9UPT6 1336 aa25.66■■□□□ 1.7
NFIX-202ENST00000360105 CCNB3Q8WWL7 1395 aa25.66■■□□□ 1.7
NFIX-202ENST00000360105 CARD11Q9BXL7 1154 aa25.64■■□□□ 1.7
NFIX-202ENST00000360105 CEP164Q9UPV0 1460 aa25.63■■□□□ 1.69
NFIX-202ENST00000360105 MLECQ14165 292 aa25.61■■□□□ 1.69
NFIX-202ENST00000360105 EIF4G1Q04637 1599 aaKnown RBP25.6■■□□□ 1.69
NFIX-202ENST00000360105 CEP162Q5TB80 1403 aa25.59■■□□□ 1.69
NFIX-202ENST00000360105 EIF5BO60841 1220 aaKnown RBP25.57■■□□□ 1.68
NFIX-202ENST00000360105 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
NFIX-202ENST00000360105 CASC1Q6TDU7 716 aa25.55■■□□□ 1.68
NFIX-202ENST00000360105 PNNQ9H307 717 aaKnown RBP25.54■■□□□ 1.68
NFIX-202ENST00000360105 NCLP19338 710 aaKnown RBP25.53■■□□□ 1.68
NFIX-202ENST00000360105 FHAD1B1AJZ9 1412 aa25.52■■□□□ 1.68
NFIX-202ENST00000360105 HIRIP3Q9BW71 556 aaPredicted RBP25.5■■□□□ 1.67
NFIX-202ENST00000360105 CARMIL2Q6F5E8 1435 aa25.5■■□□□ 1.67
NFIX-202ENST00000360105 FTSJ3Q8IY81 847 aaKnown RBP25.5■■□□□ 1.67
NFIX-202ENST00000360105 LAS1LQ9Y4W2 734 aaKnown RBP25.49■■□□□ 1.67
NFIX-202ENST00000360105 PDS5BQ9NTI5 1447 aa25.48■■□□□ 1.67
NFIX-202ENST00000360105 CHMP4BQ9H444 224 aaKnown RBP25.47■■□□□ 1.67
NFIX-202ENST00000360105 TNIKQ9UKE5 1360 aa25.44■■□□□ 1.66
NFIX-202ENST00000360105 CARMIL1Q5VZK9 1371 aa25.44■■□□□ 1.66
NFIX-202ENST00000360105 BECN1Q14457 450 aa25.43■■□□□ 1.66
NFIX-202ENST00000360105 CUX2O14529 1486 aa25.43■■□□□ 1.66
NFIX-202ENST00000360105 GOLGA2Q08379 1002 aa25.41■■□□□ 1.66
NFIX-202ENST00000360105 ZRSR1Q15695 479 aaKnown RBP25.39■■□□□ 1.66
NFIX-202ENST00000360105 SRPK2P78362 688 aaKnown RBP25.37■■□□□ 1.65
NFIX-202ENST00000360105 TMF1P82094 1093 aa25.37■■□□□ 1.65
NFIX-202ENST00000360105 NEUROD2Q15784 382 aa25.37■■□□□ 1.65
NFIX-202ENST00000360105 OS9Q13438 667 aaPredicted RBP25.36■■□□□ 1.65
NFIX-202ENST00000360105 GGT6Q6P531 493 aa25.36■■□□□ 1.65
NFIX-202ENST00000360105 U2SURPO15042 1029 aaKnown RBP25.36■■□□□ 1.65
NFIX-202ENST00000360105 GOLGA6L22H0YM25 854 aa25.36■■□□□ 1.65
NFIX-202ENST00000360105 MS4A1P11836 297 aa25.35■■□□□ 1.65
NFIX-202ENST00000360105 TNNT2P45379 298 aaPredicted RBP25.32■■□□□ 1.64
NFIX-202ENST00000360105 DDRGK1Q96HY6 314 aa25.32■■□□□ 1.64
NFIX-202ENST00000360105 EFCAB2Q5VUJ9 269 aa25.27■■□□□ 1.64
NFIX-202ENST00000360105 DCAF11Q8TEB1 546 aa25.27■■□□□ 1.64
NFIX-202ENST00000360105 HDGFL2Q7Z4V5 671 aaPredicted RBP25.26■■□□□ 1.63
NFIX-202ENST00000360105 SOX12O15370 315 aa25.25■■□□□ 1.63
NFIX-202ENST00000360105 ANP32EQ9BTT0 268 aa25.24■■□□□ 1.63
NFIX-202ENST00000360105 IRX6P78412 446 aaPredicted RBP25.23■■□□□ 1.63
NFIX-202ENST00000360105 SMARCA2P51531 1590 aa25.23■■□□□ 1.63
NFIX-202ENST00000360105 RTF1Q92541 710 aaKnown RBP25.22■■□□□ 1.63
NFIX-202ENST00000360105 TULP1O00294 542 aaPredicted RBP25.22■■□□□ 1.63
NFIX-202ENST00000360105 CC2D1BQ5T0F9 858 aaKnown RBP25.21■■□□□ 1.63
NFIX-202ENST00000360105 CSB-PGBD3P0DP91 1061 aa25.21■■□□□ 1.63
NFIX-202ENST00000360105 FGD1P98174 961 aa25.19■■□□□ 1.62
NFIX-202ENST00000360105 MORC1Q86VD1 984 aa25.19■■□□□ 1.62
NFIX-202ENST00000360105 SOGA1O94964 1423 aa25.18■■□□□ 1.62
NFIX-202ENST00000360105 SAFB2Q14151 953 aaKnown RBP eCLIP25.18■■□□□ 1.62
NFIX-202ENST00000360105 EID1Q9Y6B2 187 aa25.18■■□□□ 1.62
NFIX-202ENST00000360105 PAK3O75914 559 aaPredicted RBP25.17■■□□□ 1.62
NFIX-202ENST00000360105 STK26Q9P289 416 aa25.16■■□□□ 1.62
NFIX-202ENST00000360105 FRAT1Q92837 279 aaPredicted RBP25.16■■□□□ 1.62
NFIX-202ENST00000360105 TMX4Q9H1E5 349 aaPredicted RBP25.16■■□□□ 1.62
NFIX-202ENST00000360105 KCNJ4P48050 445 aa25.15■■□□□ 1.62
NFIX-202ENST00000360105 MIER1Q8N108 512 aa25.13■■□□□ 1.61
NFIX-202ENST00000360105 CECR2Q9BXF3 1484 aa25.13■■□□□ 1.61
NFIX-202ENST00000360105 CCDC9Q9Y3X0 531 aaKnown RBP25.13■■□□□ 1.61
NFIX-202ENST00000360105 ARHGAP35Q9NRY4 1499 aa25.12■■□□□ 1.61
NFIX-202ENST00000360105 NBR1Q14596 966 aa25.08■■□□□ 1.61
NFIX-202ENST00000360105 CHMP4AQ9BY43 222 aa25.07■■□□□ 1.6
NFIX-202ENST00000360105 SIN3AQ96ST3 1273 aa25.06■■□□□ 1.6
NFIX-202ENST00000360105 NAP1L2Q9ULW6 460 aaPredicted RBP25.05■■□□□ 1.6
NFIX-202ENST00000360105 FMN1Q68DA7 1419 aa25.05■■□□□ 1.6
NFIX-202ENST00000360105 TDRD9Q8NDG6 1382 aaKnown RBP25.04■■□□□ 1.6
NFIX-202ENST00000360105 PKD2Q13563 968 aa25.04■■□□□ 1.6
NFIX-202ENST00000360105 ANKRD30AQ9BXX3 1397 aa25.04■■□□□ 1.6
NFIX-202ENST00000360105 CALD1Q05682 793 aaKnown RBP25.03■■□□□ 1.6
NFIX-202ENST00000360105 TAOK2Q9UL54 1235 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms