RNA–Protein interactions for RNA: ENST00000358062.6

DMD-204, Transcript of dystrophin, humanhuman

TSL 5

Gene DMD, Length 6,773 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-204ENST00000358062 PLEKHG5O94827 1062 aa9.21□□□□□ -0.94
DMD-204ENST00000358062 HDGFP51858 240 aaKnown RBP9.2□□□□□ -0.94
DMD-204ENST00000358062 CFAP53Q96M91 514 aa9.2□□□□□ -0.94
DMD-204ENST00000358062 EEA1Q15075 1411 aa9.19□□□□□ -0.94
DMD-204ENST00000358062 CFDP1Q9UEE9 299 aaPredicted RBP9.18□□□□□ -0.94
DMD-204ENST00000358062 FAM9BQ8IZU0 186 aa9.18□□□□□ -0.94
DMD-204ENST00000358062 CLIP1P30622 1438 aa9.18□□□□□ -0.94
DMD-204ENST00000358062 HNRNPUQ00839 825 aaKnown RBP eCLIP9.17□□□□□ -0.94
DMD-204ENST00000358062 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
DMD-204ENST00000358062 NPHP1O15259 732 aa9.17□□□□□ -0.94
DMD-204ENST00000358062 ARXQ96QS3 562 aa9.16□□□□□ -0.94
DMD-204ENST00000358062 LMOD2Q6P5Q4 547 aa9.15□□□□□ -0.94
DMD-204ENST00000358062 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
DMD-204ENST00000358062 POGKQ9P215 609 aa9.15□□□□□ -0.95
DMD-204ENST00000358062 KANK1Q14678 1352 aa9.15□□□□□ -0.95
DMD-204ENST00000358062 RRP7BPQ9NSQ0 103 aa9.14□□□□□ -0.95
DMD-204ENST00000358062 EIF4G2P78344 907 aaKnown RBP eCLIP9.14□□□□□ -0.952e-7■■■□□ 16.3
DMD-204ENST00000358062 GOLGA3Q08378 1498 aa9.13□□□□□ -0.95
DMD-204ENST00000358062 SENP3Q9H4L4 574 aaPredicted RBP9.13□□□□□ -0.95
DMD-204ENST00000358062 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
DMD-204ENST00000358062 DDX10Q13206 875 aaKnown RBP9.12□□□□□ -0.95
DMD-204ENST00000358062 MRS2Q9HD23 443 aa9.12□□□□□ -0.95
DMD-204ENST00000358062 GTF3C3Q9Y5Q9 886 aa9.12□□□□□ -0.95
DMD-204ENST00000358062 WRNQ14191 1432 aaPredicted RBP eCLIP9.11□□□□□ -0.95
DMD-204ENST00000358062 RGL3Q3MIN7 710 aa9.11□□□□□ -0.95
DMD-204ENST00000358062 NUDCQ9Y266 331 aa9.11□□□□□ -0.95
DMD-204ENST00000358062 KNSTRNQ9Y448 316 aa9.1□□□□□ -0.95
DMD-204ENST00000358062 MAPK8IP3Q9UPT6 1336 aa9.09□□□□□ -0.95
DMD-204ENST00000358062 CCDC136Q96JN2 1154 aa9.09□□□□□ -0.95
DMD-204ENST00000358062 PPM1GO15355 546 aaPredicted RBP9.08□□□□□ -0.96
DMD-204ENST00000358062 PNNQ9H307 717 aaKnown RBP9.08□□□□□ -0.96
DMD-204ENST00000358062 CCNB3Q8WWL7 1395 aa9.07□□□□□ -0.96
DMD-204ENST00000358062 CASC1Q6TDU7 716 aa9.07□□□□□ -0.96
DMD-204ENST00000358062 NCLP19338 710 aaKnown RBP9.06□□□□□ -0.96
DMD-204ENST00000358062 CHMP4BQ9H444 224 aaKnown RBP9.06□□□□□ -0.96
DMD-204ENST00000358062 CARMIL2Q6F5E8 1435 aa9.05□□□□□ -0.96
DMD-204ENST00000358062 MLECQ14165 292 aa9.05□□□□□ -0.96
DMD-204ENST00000358062 FKBP8Q14318 412 aa9.05□□□□□ -0.96
DMD-204ENST00000358062 CEP164Q9UPV0 1460 aa9.05□□□□□ -0.96
DMD-204ENST00000358062 EIF4G1Q04637 1599 aaKnown RBP9.05□□□□□ -0.96
DMD-204ENST00000358062 BAZ1AQ9NRL2 1556 aaPredicted RBP9.04□□□□□ -0.96
DMD-204ENST00000358062 CARD11Q9BXL7 1154 aa9.04□□□□□ -0.96
DMD-204ENST00000358062 DCAF1Q9Y4B6 1507 aa9.04□□□□□ -0.96
DMD-204ENST00000358062 GOLGA2Q08379 1002 aa9.04□□□□□ -0.96
DMD-204ENST00000358062 PDS5BQ9NTI5 1447 aa9.04□□□□□ -0.96
DMD-204ENST00000358062 FHAD1B1AJZ9 1412 aa9.04□□□□□ -0.96
DMD-204ENST00000358062 ZRSR1Q15695 479 aaKnown RBP9.03□□□□□ -0.96
DMD-204ENST00000358062 FTSJ3Q8IY81 847 aaKnown RBP9.02□□□□□ -0.97
DMD-204ENST00000358062 BECN1Q14457 450 aa9.01□□□□□ -0.97
DMD-204ENST00000358062 MS4A1P11836 297 aa9□□□□□ -0.97
DMD-204ENST00000358062 GOLGA6L22H0YM25 854 aa9□□□□□ -0.97
DMD-204ENST00000358062 LAS1LQ9Y4W2 734 aaKnown RBP8.99□□□□□ -0.97
DMD-204ENST00000358062 CEP162Q5TB80 1403 aa8.99□□□□□ -0.97
DMD-204ENST00000358062 OS9Q13438 667 aaPredicted RBP8.99□□□□□ -0.97
DMD-204ENST00000358062 TMX4Q9H1E5 349 aaPredicted RBP8.99□□□□□ -0.97
DMD-204ENST00000358062 CUX2O14529 1486 aa8.97□□□□□ -0.97
DMD-204ENST00000358062 SRPK2P78362 688 aaKnown RBP8.97□□□□□ -0.97
DMD-204ENST00000358062 CARMIL1Q5VZK9 1371 aa8.97□□□□□ -0.97
DMD-204ENST00000358062 TMF1P82094 1093 aa8.97□□□□□ -0.97
DMD-204ENST00000358062 ANP32EQ9BTT0 268 aa8.97□□□□□ -0.97
DMD-204ENST00000358062 GGT6Q6P531 493 aa8.96□□□□□ -0.98
DMD-204ENST00000358062 DDRGK1Q96HY6 314 aa8.96□□□□□ -0.98
DMD-204ENST00000358062 U2SURPO15042 1029 aaKnown RBP8.95□□□□□ -0.98
DMD-204ENST00000358062 SMARCA2P51531 1590 aa8.95□□□□□ -0.98
DMD-204ENST00000358062 HDGFL2Q7Z4V5 671 aaPredicted RBP8.95□□□□□ -0.98
DMD-204ENST00000358062 TNIKQ9UKE5 1360 aa8.95□□□□□ -0.98
DMD-204ENST00000358062 EFCAB2Q5VUJ9 269 aa8.95□□□□□ -0.98
DMD-204ENST00000358062 EID1Q9Y6B2 187 aa8.95□□□□□ -0.98
DMD-204ENST00000358062 CSB-PGBD3P0DP91 1061 aa8.94□□□□□ -0.98
DMD-204ENST00000358062 CHMP4AQ9BY43 222 aa8.94□□□□□ -0.98
DMD-204ENST00000358062 RTF1Q92541 710 aaKnown RBP8.94□□□□□ -0.98
DMD-204ENST00000358062 FGD1P98174 961 aa8.94□□□□□ -0.98
DMD-204ENST00000358062 TULP1O00294 542 aaPredicted RBP8.94□□□□□ -0.98
DMD-204ENST00000358062 NEUROD2Q15784 382 aa8.93□□□□□ -0.98
DMD-204ENST00000358062 CCDC9Q9Y3X0 531 aaKnown RBP8.93□□□□□ -0.98
DMD-204ENST00000358062 KCNJ4P48050 445 aa8.92□□□□□ -0.98
DMD-204ENST00000358062 TNNT2P45379 298 aaPredicted RBP8.91□□□□□ -0.98
DMD-204ENST00000358062 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
DMD-204ENST00000358062 AEBP2Q6ZN18 517 aaPredicted RBP8.91□□□□□ -0.98
DMD-204ENST00000358062 HIRIP3Q9BW71 556 aaPredicted RBP8.91□□□□□ -0.98
DMD-204ENST00000358062 SOX12O15370 315 aa8.91□□□□□ -0.98
DMD-204ENST00000358062 DCAF11Q8TEB1 546 aa8.9□□□□□ -0.98
DMD-204ENST00000358062 MORC1Q86VD1 984 aa8.9□□□□□ -0.99
DMD-204ENST00000358062 CALD1Q05682 793 aaKnown RBP8.89□□□□□ -0.99
DMD-204ENST00000358062 SOGA1O94964 1423 aa8.89□□□□□ -0.99
DMD-204ENST00000358062 CFAP44Q96MT7 982 aa8.89□□□□□ -0.99
DMD-204ENST00000358062 CECR2Q9BXF3 1484 aa8.88□□□□□ -0.99
DMD-204ENST00000358062 ISY1Q9ULR0 285 aaKnown RBP8.88□□□□□ -0.99
DMD-204ENST00000358062 GOLGA6L6A8MZA4 724 aa8.88□□□□□ -0.99
DMD-204ENST00000358062 EIF3AQ14152 1382 aaKnown RBP8.88□□□□□ -0.99
DMD-204ENST00000358062 STK26Q9P289 416 aa8.88□□□□□ -0.99
DMD-204ENST00000358062 ARHGAP35Q9NRY4 1499 aa8.87□□□□□ -0.99
DMD-204ENST00000358062 CC2D1BQ5T0F9 858 aaKnown RBP8.87□□□□□ -0.99
DMD-204ENST00000358062 SAFB2Q14151 953 aaKnown RBP eCLIP8.87□□□□□ -0.99
DMD-204ENST00000358062 NAP1L2Q9ULW6 460 aaPredicted RBP8.87□□□□□ -0.99
DMD-204ENST00000358062 FMN1Q68DA7 1419 aa8.87□□□□□ -0.99
DMD-204ENST00000358062 FRAT1Q92837 279 aaPredicted RBP8.86□□□□□ -0.99
DMD-204ENST00000358062 MCCP23508 829 aa8.86□□□□□ -0.99
DMD-204ENST00000358062 RSPH4AQ5TD94 716 aa8.86□□□□□ -0.99
DMD-204ENST00000358062 TRIM44Q96DX7 344 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms