RNA–Protein interactions for RNA: ENST00000357345.7

SYNJ1-201, Transcript of synaptojanin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SYNJ1, Length 7,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNJ1-201ENST00000357345 CNKSR2Q8WXI2 1034 aa12.74□□□□□ -0.37
SYNJ1-201ENST00000357345 NCLP19338 710 aaKnown RBP12.74□□□□□ -0.37
SYNJ1-201ENST00000357345 FOXD1Q16676 465 aa12.73□□□□□ -0.37
SYNJ1-201ENST00000357345 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.72□□□□□ -0.37
SYNJ1-201ENST00000357345 WDR43Q15061 677 aaKnown RBP eCLIP12.72□□□□□ -0.37
SYNJ1-201ENST00000357345 TRIM44Q96DX7 344 aaPredicted RBP12.71□□□□□ -0.37
SYNJ1-201ENST00000357345 ANP32AP39687 249 aaKnown RBP12.71□□□□□ -0.38
SYNJ1-201ENST00000357345 TRIM26Q12899 539 aaPredicted RBP12.7□□□□□ -0.38
SYNJ1-201ENST00000357345 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
SYNJ1-201ENST00000357345 TSPY4P0CV99 314 aa12.68□□□□□ -0.38
SYNJ1-201ENST00000357345 TSPY10P0CW01 314 aa12.68□□□□□ -0.38
SYNJ1-201ENST00000357345 ANP32EQ9BTT0 268 aa12.68□□□□□ -0.38
SYNJ1-201ENST00000357345 MEX3CQ5U5Q3 659 aaKnown RBP12.67□□□□□ -0.38
SYNJ1-201ENST00000357345 KLHL34Q8N239 644 aa12.67□□□□□ -0.38
SYNJ1-201ENST00000357345 PPM1GO15355 546 aaPredicted RBP12.66□□□□□ -0.38
SYNJ1-201ENST00000357345 TMC1Q8TDI8 760 aa12.65□□□□□ -0.38
SYNJ1-201ENST00000357345 FGD1P98174 961 aa12.64□□□□□ -0.39
SYNJ1-201ENST00000357345 CWC22Q9HCG8 908 aaKnown RBP12.64□□□□□ -0.39
SYNJ1-201ENST00000357345 MSH5O43196 834 aa12.64□□□□□ -0.39
SYNJ1-201ENST00000357345 NAP1L2Q9ULW6 460 aaPredicted RBP12.63□□□□□ -0.39
SYNJ1-201ENST00000357345 OS9Q13438 667 aaPredicted RBP12.63□□□□□ -0.39
SYNJ1-201ENST00000357345 SALL2Q9Y467 1007 aaPredicted RBP12.63□□□□□ -0.39
SYNJ1-201ENST00000357345 HDGFP51858 240 aaKnown RBP12.61□□□□□ -0.39
SYNJ1-201ENST00000357345 TNNT2P45379 298 aaPredicted RBP12.6□□□□□ -0.39
SYNJ1-201ENST00000357345 MLECQ14165 292 aa12.6□□□□□ -0.39
SYNJ1-201ENST00000357345 CASC1Q6TDU7 716 aa12.59□□□□□ -0.39
SYNJ1-201ENST00000357345 CSB-PGBD3P0DP91 1061 aa12.59□□□□□ -0.39
SYNJ1-201ENST00000357345 POGKQ9P215 609 aa12.58□□□□□ -0.4
SYNJ1-201ENST00000357345 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
SYNJ1-201ENST00000357345 ZNF330Q9Y3S2 320 aaPredicted RBP12.57□□□□□ -0.4
SYNJ1-201ENST00000357345 TPRNQ4KMQ1 711 aa12.55□□□□□ -0.4
SYNJ1-201ENST00000357345 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
SYNJ1-201ENST00000357345 CFAP53Q96M91 514 aa12.54□□□□□ -0.4
SYNJ1-201ENST00000357345 KCNJ4P48050 445 aa12.53□□□□□ -0.4
SYNJ1-201ENST00000357345 ZCCHC6Q5VYS8 1495 aaKnown RBP12.52□□□□□ -0.4
SYNJ1-201ENST00000357345 KIAA2012Q0VF49 1180 aa12.52□□□□□ -0.41
SYNJ1-201ENST00000357345 LAS1LQ9Y4W2 734 aaKnown RBP12.51□□□□□ -0.41
SYNJ1-201ENST00000357345 GOLGA6L6A8MZA4 724 aa12.51□□□□□ -0.41
SYNJ1-201ENST00000357345 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
SYNJ1-201ENST00000357345 L1TD1Q5T7N2 865 aaKnown RBP12.5□□□□□ -0.41
SYNJ1-201ENST00000357345 GTF2E1P29083 439 aaPredicted RBP12.49□□□□□ -0.41
SYNJ1-201ENST00000357345 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
SYNJ1-201ENST00000357345 PNNQ9H307 717 aaKnown RBP12.49□□□□□ -0.41
SYNJ1-201ENST00000357345 SOX12O15370 315 aa12.47□□□□□ -0.41
SYNJ1-201ENST00000357345 VPS53Q5VIR6 699 aa12.47□□□□□ -0.41
SYNJ1-201ENST00000357345 PDE4CQ08493 712 aa12.47□□□□□ -0.41
SYNJ1-201ENST00000357345 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
SYNJ1-201ENST00000357345 GOLGA6L22H0YM25 854 aa12.46□□□□□ -0.41
SYNJ1-201ENST00000357345 SF3B2Q13435 895 aaKnown RBP12.46□□□□□ -0.42
SYNJ1-201ENST00000357345 PAK3O75914 559 aaPredicted RBP12.45□□□□□ -0.42
SYNJ1-201ENST00000357345 HRCP23327 699 aa12.45□□□□□ -0.42
SYNJ1-201ENST00000357345 NOC3LQ8WTT2 800 aaKnown RBP12.45□□□□□ -0.42
SYNJ1-201ENST00000357345 NRDCO43847 1150 aa12.45□□□□□ -0.42
SYNJ1-201ENST00000357345 MAPK8IP3Q9UPT6 1336 aa12.44□□□□□ -0.42
SYNJ1-201ENST00000357345 CHIC2Q9UKJ5 165 aa12.44□□□□□ -0.42
SYNJ1-201ENST00000357345 TONSLQ96HA7 1378 aa12.44□□□□□ -0.42
SYNJ1-201ENST00000357345 PTMAP06454 111 aaKnown RBP12.44□□□□□ -0.42
SYNJ1-201ENST00000357345 FBXO3Q9UK99 471 aa12.43□□□□□ -0.42
SYNJ1-201ENST00000357345 NBR1Q14596 966 aa12.43□□□□□ -0.42
SYNJ1-201ENST00000357345 TCEAL9Q9UHQ7 104 aa12.42□□□□□ -0.42
SYNJ1-201ENST00000357345 FRAT2O75474 233 aaPredicted RBP12.41□□□□□ -0.42
SYNJ1-201ENST00000357345 FAM9BQ8IZU0 186 aa12.41□□□□□ -0.42
SYNJ1-201ENST00000357345 CEP89Q96ST8 783 aa12.41□□□□□ -0.42
SYNJ1-201ENST00000357345 TRIM34Q9BYJ4 488 aa12.41□□□□□ -0.42
SYNJ1-201ENST00000357345 NUDCQ9Y266 331 aa12.41□□□□□ -0.42
SYNJ1-201ENST00000357345 PLEKHD1A6NEE1 506 aa12.4□□□□□ -0.42
SYNJ1-201ENST00000357345 NEUROD2Q15784 382 aa12.4□□□□□ -0.42
SYNJ1-201ENST00000357345 TAF7LQ5H9L4 462 aa12.4□□□□□ -0.42
SYNJ1-201ENST00000357345 SRPK2P78362 688 aaKnown RBP12.39□□□□□ -0.43
SYNJ1-201ENST00000357345 WWC1Q8IX03 1113 aa12.39□□□□□ -0.43
SYNJ1-201ENST00000357345 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
SYNJ1-201ENST00000357345 MARCH6O60337 910 aa12.37□□□□□ -0.43
SYNJ1-201ENST00000357345 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
SYNJ1-201ENST00000357345 DNTTIP2Q5QJE6 756 aaKnown RBP12.36□□□□□ -0.43
SYNJ1-201ENST00000357345 GORABQ5T7V8 394 aa12.36□□□□□ -0.43
SYNJ1-201ENST00000357345 ANO8Q9HCE9 1232 aaPredicted RBP12.36□□□□□ -0.43
SYNJ1-201ENST00000357345 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
SYNJ1-201ENST00000357345 PLCB2Q00722 1185 aa12.35□□□□□ -0.43
SYNJ1-201ENST00000357345 CDCA8Q53HL2 280 aa12.35□□□□□ -0.43
SYNJ1-201ENST00000357345 ERCC6Q03468 1493 aa12.35□□□□□ -0.43
SYNJ1-201ENST00000357345 GOLGA6L4A6NEF3 574 aa12.35□□□□□ -0.43
SYNJ1-201ENST00000357345 RTF1Q92541 710 aaKnown RBP12.35□□□□□ -0.43
SYNJ1-201ENST00000357345 CCAR1Q8IX12 1150 aaKnown RBP12.34□□□□□ -0.43
SYNJ1-201ENST00000357345 PPP1R1BQ9UD71 204 aaPredicted RBP12.34□□□□□ -0.43
SYNJ1-201ENST00000357345 EVA1CP58658 441 aa12.33□□□□□ -0.44
SYNJ1-201ENST00000357345 RGL3Q3MIN7 710 aa12.33□□□□□ -0.44
SYNJ1-201ENST00000357345 BECN1Q14457 450 aa12.32□□□□□ -0.44
SYNJ1-201ENST00000357345 A0A0U1RQG5 324 aaPredicted RBP12.31□□□□□ -0.44
SYNJ1-201ENST00000357345 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
SYNJ1-201ENST00000357345 CHMP3Q9Y3E7 222 aa12.31□□□□□ -0.44
SYNJ1-201ENST00000357345 RASSF8Q8NHQ8 419 aa12.3□□□□□ -0.44
SYNJ1-201ENST00000357345 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
SYNJ1-201ENST00000357345 CALRP27797 417 aaKnown RBP12.3□□□□□ -0.44
SYNJ1-201ENST00000357345 CCDC136Q96JN2 1154 aa12.29□□□□□ -0.44
SYNJ1-201ENST00000357345 RAD21O60216 631 aa12.29□□□□□ -0.44
SYNJ1-201ENST00000357345 PAF1Q8N7H5 531 aa12.29□□□□□ -0.44
SYNJ1-201ENST00000357345 FBXW7Q969H0 707 aa12.29□□□□□ -0.44
SYNJ1-201ENST00000357345 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
SYNJ1-201ENST00000357345 U2SURPO15042 1029 aaKnown RBP12.28□□□□□ -0.44
SYNJ1-201ENST00000357345 KNSTRNQ9Y448 316 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms