RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 UPF2Q9HAU5 1272 aaKnown RBP15.13■□□□□ 0.01
FN1-204ENST00000356005 CDCA8Q53HL2 280 aa15.12■□□□□ 0.01
FN1-204ENST00000356005 TMC1Q8TDI8 760 aa15.09■□□□□ 0.01
FN1-204ENST00000356005 CFDP1Q9UEE9 299 aaPredicted RBP15.09■□□□□ 0.01
FN1-204ENST00000356005 KDM2AQ9Y2K7 1162 aa15.09■□□□□ 0.01
FN1-204ENST00000356005 KANK1Q14678 1352 aa15.09■□□□□ 0.01
FN1-204ENST00000356005 EIF4G1Q04637 1599 aaKnown RBP15.09■□□□□ 0.01
FN1-204ENST00000356005 HSP90AA1P07900 732 aaKnown RBP15.07■□□□□ 0
FN1-204ENST00000356005 MYH16Q9H6N6 1097 aa15.07■□□□□ 0
FN1-204ENST00000356005 FHAD1B1AJZ9 1412 aa15.06■□□□□ 0
FN1-204ENST00000356005 ZBTB7CA1YPR0 619 aa15.06■□□□□ 0
FN1-204ENST00000356005 CEP164Q9UPV0 1460 aa15.06■□□□□ 0
FN1-204ENST00000356005 CARMIL2Q6F5E8 1435 aa15.05■□□□□ -0
FN1-204ENST00000356005 ANP32AP39687 249 aaKnown RBP15□□□□□ -0.01
FN1-204ENST00000356005 ANP32BQ92688 251 aaKnown RBP15□□□□□ -0.01
FN1-204ENST00000356005 CFAP53Q96M91 514 aa15□□□□□ -0.01
FN1-204ENST00000356005 POGKQ9P215 609 aa14.96□□□□□ -0.02
FN1-204ENST00000356005 NPHP1O15259 732 aa14.95□□□□□ -0.02
FN1-204ENST00000356005 RRP7BPQ9NSQ0 103 aa14.95□□□□□ -0.02
FN1-204ENST00000356005 EIF4G2P78344 907 aaKnown RBP eCLIP14.94□□□□□ -0.02
FN1-204ENST00000356005 PLEKHG5O94827 1062 aa14.94□□□□□ -0.02
FN1-204ENST00000356005 CCNB3Q8WWL7 1395 aa14.93□□□□□ -0.02
FN1-204ENST00000356005 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
FN1-204ENST00000356005 EIF5BO60841 1220 aaKnown RBP14.92□□□□□ -0.02
FN1-204ENST00000356005 CUX2O14529 1486 aa14.91□□□□□ -0.02
FN1-204ENST00000356005 LMOD2Q6P5Q4 547 aa14.9□□□□□ -0.02
FN1-204ENST00000356005 CDK11BP21127 795 aaKnown RBP14.9□□□□□ -0.02
FN1-204ENST00000356005 CECR2Q9BXF3 1484 aa14.9□□□□□ -0.02
FN1-204ENST00000356005 KNSTRNQ9Y448 316 aa14.89□□□□□ -0.03
FN1-204ENST00000356005 FAM9BQ8IZU0 186 aa14.89□□□□□ -0.03
FN1-204ENST00000356005 ARXQ96QS3 562 aa14.88□□□□□ -0.03
FN1-204ENST00000356005 RGL3Q3MIN7 710 aa14.87□□□□□ -0.03
FN1-204ENST00000356005 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
FN1-204ENST00000356005 HNRNPUQ00839 825 aaKnown RBP eCLIP14.87□□□□□ -0.03
FN1-204ENST00000356005 CARMIL1Q5VZK9 1371 aa14.86□□□□□ -0.03
FN1-204ENST00000356005 MYO15BQ96JP2 1530 aa14.86□□□□□ -0.03
FN1-204ENST00000356005 CEP162Q5TB80 1403 aa14.85□□□□□ -0.03
FN1-204ENST00000356005 NUDCQ9Y266 331 aa14.85□□□□□ -0.03
FN1-204ENST00000356005 SOGA1O94964 1423 aa14.84□□□□□ -0.03
FN1-204ENST00000356005 DDX10Q13206 875 aaKnown RBP14.83□□□□□ -0.04
FN1-204ENST00000356005 SENP3Q9H4L4 574 aaPredicted RBP14.82□□□□□ -0.04
FN1-204ENST00000356005 SALL2Q9Y467 1007 aaPredicted RBP14.81□□□□□ -0.04
FN1-204ENST00000356005 MLECQ14165 292 aa14.81□□□□□ -0.04
FN1-204ENST00000356005 PPM1GO15355 546 aaPredicted RBP14.81□□□□□ -0.04
FN1-204ENST00000356005 CHMP4BQ9H444 224 aaKnown RBP14.79□□□□□ -0.04
FN1-204ENST00000356005 MRS2Q9HD23 443 aa14.79□□□□□ -0.04
FN1-204ENST00000356005 MAPK8IP3Q9UPT6 1336 aa14.79□□□□□ -0.04
FN1-204ENST00000356005 WIZO95785 1651 aa14.79□□□□□ -0.04
FN1-204ENST00000356005 TNIKQ9UKE5 1360 aa14.78□□□□□ -0.04
FN1-204ENST00000356005 CASC1Q6TDU7 716 aa14.78□□□□□ -0.04
FN1-204ENST00000356005 PRDM2Q13029 1718 aa14.77□□□□□ -0.05
FN1-204ENST00000356005 TOP2AP11388 1531 aaKnown RBP14.77□□□□□ -0.05
FN1-204ENST00000356005 FMN1Q68DA7 1419 aa14.76□□□□□ -0.05
FN1-204ENST00000356005 CARD11Q9BXL7 1154 aa14.76□□□□□ -0.05
FN1-204ENST00000356005 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
FN1-204ENST00000356005 GOLGA2Q08379 1002 aa14.75□□□□□ -0.05
FN1-204ENST00000356005 EID1Q9Y6B2 187 aa14.75□□□□□ -0.05
FN1-204ENST00000356005 ARHGAP35Q9NRY4 1499 aa14.74□□□□□ -0.05
FN1-204ENST00000356005 EFCAB2Q5VUJ9 269 aa14.74□□□□□ -0.05
FN1-204ENST00000356005 CCDC136Q96JN2 1154 aa14.73□□□□□ -0.05
FN1-204ENST00000356005 AEBP2Q6ZN18 517 aaPredicted RBP14.71□□□□□ -0.05
FN1-204ENST00000356005 FTSJ3Q8IY81 847 aaKnown RBP14.71□□□□□ -0.05
FN1-204ENST00000356005 TMX4Q9H1E5 349 aaPredicted RBP14.7□□□□□ -0.06
FN1-204ENST00000356005 CCDC88BA6NC98 1476 aa14.7□□□□□ -0.06
FN1-204ENST00000356005 RSPH4AQ5TD94 716 aa14.69□□□□□ -0.06
FN1-204ENST00000356005 MS4A1P11836 297 aa14.69□□□□□ -0.06
FN1-204ENST00000356005 GGT6Q6P531 493 aa14.68□□□□□ -0.06
FN1-204ENST00000356005 SRPK2P78362 688 aaKnown RBP14.68□□□□□ -0.06
FN1-204ENST00000356005 TMF1P82094 1093 aa14.68□□□□□ -0.06
FN1-204ENST00000356005 CHMP4AQ9BY43 222 aa14.68□□□□□ -0.06
FN1-204ENST00000356005 GTF3C3Q9Y5Q9 886 aa14.68□□□□□ -0.06
FN1-204ENST00000356005 CCDC18Q5T9S5 1454 aa14.67□□□□□ -0.06
FN1-204ENST00000356005 CADPSQ9ULU8 1353 aa14.66□□□□□ -0.06
FN1-204ENST00000356005 MROH2BQ7Z745 1585 aa14.65□□□□□ -0.06
FN1-204ENST00000356005 KAT6BQ8WYB5 2073 aa14.65□□□□□ -0.06
FN1-204ENST00000356005 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
FN1-204ENST00000356005 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
FN1-204ENST00000356005 OSCARQ8IYS5 282 aa14.64□□□□□ -0.07
FN1-204ENST00000356005 LAS1LQ9Y4W2 734 aaKnown RBP14.63□□□□□ -0.07
FN1-204ENST00000356005 EIF3AQ14152 1382 aaKnown RBP14.62□□□□□ -0.07
FN1-204ENST00000356005 ZRSR1Q15695 479 aaKnown RBP14.62□□□□□ -0.07
FN1-204ENST00000356005 RTF1Q92541 710 aaKnown RBP14.62□□□□□ -0.07
FN1-204ENST00000356005 BECN1Q14457 450 aa14.62□□□□□ -0.07
FN1-204ENST00000356005 FKBP8Q14318 412 aa14.61□□□□□ -0.07
FN1-204ENST00000356005 ANKRD30AQ9BXX3 1397 aa14.6□□□□□ -0.07
FN1-204ENST00000356005 OS9Q13438 667 aaPredicted RBP14.6□□□□□ -0.07
FN1-204ENST00000356005 PAK3O75914 559 aaPredicted RBP14.59□□□□□ -0.07
FN1-204ENST00000356005 DCAF11Q8TEB1 546 aa14.59□□□□□ -0.07
FN1-204ENST00000356005 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
FN1-204ENST00000356005 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
FN1-204ENST00000356005 CALD1Q05682 793 aaKnown RBP14.57□□□□□ -0.08
FN1-204ENST00000356005 TDRD9Q8NDG6 1382 aaKnown RBP14.57□□□□□ -0.08
FN1-204ENST00000356005 CSB-PGBD3P0DP91 1061 aa14.56□□□□□ -0.08
FN1-204ENST00000356005 SPAG9O60271 1321 aaKnown RBP14.56□□□□□ -0.08
FN1-204ENST00000356005 GOLGA6L22H0YM25 854 aa14.56□□□□□ -0.08
FN1-204ENST00000356005 RAPGEF2Q9Y4G8 1499 aa14.55□□□□□ -0.08
FN1-204ENST00000356005 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
FN1-204ENST00000356005 ANP32EQ9BTT0 268 aa14.55□□□□□ -0.08
FN1-204ENST00000356005 WASHC2CQ9Y4E1 1318 aa14.55□□□□□ -0.08
FN1-204ENST00000356005 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms