RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 CSB-PGBD3P0DP91 1061 aa6.93□□□□□ -1.3
CKAP5-202ENST00000354558 TMC1Q8TDI8 760 aa6.93□□□□□ -1.3
CKAP5-202ENST00000354558 PRM3Q9NNZ6 103 aa6.93□□□□□ -1.3
CKAP5-202ENST00000354558 TAOK2Q9UL54 1235 aa6.93□□□□□ -1.3
CKAP5-202ENST00000354558 KDM2AQ9Y2K7 1162 aa6.92□□□□□ -1.3
CKAP5-202ENST00000354558 ANP32CO43423 234 aa6.91□□□□□ -1.3
CKAP5-202ENST00000354558 POGKQ9P215 609 aa6.91□□□□□ -1.3
CKAP5-202ENST00000354558 MYH16Q9H6N6 1097 aa6.91□□□□□ -1.3
CKAP5-202ENST00000354558 CHIC2Q9UKJ5 165 aa6.91□□□□□ -1.3
CKAP5-202ENST00000354558 SF3B2Q13435 895 aaKnown RBP6.91□□□□□ -1.3
CKAP5-202ENST00000354558 PAK3O75914 559 aaPredicted RBP6.89□□□□□ -1.31
CKAP5-202ENST00000354558 PLEKHD1A6NEE1 506 aa6.89□□□□□ -1.31
CKAP5-202ENST00000354558 SCRIBQ14160 1630 aa6.89□□□□□ -1.31
CKAP5-202ENST00000354558 ZNF330Q9Y3S2 320 aaPredicted RBP6.89□□□□□ -1.31
CKAP5-202ENST00000354558 SOX12O15370 315 aa6.89□□□□□ -1.31
CKAP5-202ENST00000354558 TRIM26Q12899 539 aaPredicted RBP6.88□□□□□ -1.31
CKAP5-202ENST00000354558 FKBP8Q14318 412 aa6.88□□□□□ -1.31
CKAP5-202ENST00000354558 CWC22Q9HCG8 908 aaKnown RBP6.88□□□□□ -1.31
CKAP5-202ENST00000354558 WDR43Q15061 677 aaKnown RBP eCLIP6.87□□□□□ -1.31
CKAP5-202ENST00000354558 DIEXFQ68CQ4 756 aaKnown RBP6.85□□□□□ -1.31
CKAP5-202ENST00000354558 PPP1R1BQ9UD71 204 aaPredicted RBP6.85□□□□□ -1.31
CKAP5-202ENST00000354558 SALL2Q9Y467 1007 aaPredicted RBP6.84□□□□□ -1.31
CKAP5-202ENST00000354558 LAS1LQ9Y4W2 734 aaKnown RBP6.83□□□□□ -1.32
CKAP5-202ENST00000354558 LOC105371045A0A1W2PR82 267 aa6.83□□□□□ -1.32
CKAP5-202ENST00000354558 EVA1CP58658 441 aa6.82□□□□□ -1.32
CKAP5-202ENST00000354558 CNKSR2Q8WXI2 1034 aa6.82□□□□□ -1.32
CKAP5-202ENST00000354558 OS9Q13438 667 aaPredicted RBP6.82□□□□□ -1.32
CKAP5-202ENST00000354558 EID1Q9Y6B2 187 aa6.81□□□□□ -1.32
CKAP5-202ENST00000354558 ANP32BQ92688 251 aaKnown RBP6.81□□□□□ -1.32
CKAP5-202ENST00000354558 UPF2Q9HAU5 1272 aaKnown RBP6.8□□□□□ -1.32
CKAP5-202ENST00000354558 RGL3Q3MIN7 710 aa6.8□□□□□ -1.32
CKAP5-202ENST00000354558 CFAP44Q96MT7 982 aa6.79□□□□□ -1.32
CKAP5-202ENST00000354558 KANK1Q14678 1352 aa6.79□□□□□ -1.32
CKAP5-202ENST00000354558 NAP1L2Q9ULW6 460 aaPredicted RBP6.79□□□□□ -1.32
CKAP5-202ENST00000354558 SRPK2P78362 688 aaKnown RBP6.79□□□□□ -1.32
CKAP5-202ENST00000354558 GTF2E1P29083 439 aaPredicted RBP6.79□□□□□ -1.32
CKAP5-202ENST00000354558 CYB5RLQ6IPT4 315 aa6.78□□□□□ -1.32
CKAP5-202ENST00000354558 CFAP53Q96M91 514 aa6.78□□□□□ -1.32
CKAP5-202ENST00000354558 MTUS2Q5JR59 1369 aa6.78□□□□□ -1.32
CKAP5-202ENST00000354558 GGT6Q6P531 493 aa6.78□□□□□ -1.32
CKAP5-202ENST00000354558 ZRSR1Q15695 479 aaKnown RBP6.77□□□□□ -1.33
CKAP5-202ENST00000354558 TONSLQ96HA7 1378 aa6.77□□□□□ -1.33
CKAP5-202ENST00000354558 CTDP1Q9Y5B0 961 aaPredicted RBP6.77□□□□□ -1.33
CKAP5-202ENST00000354558 FBXW7Q969H0 707 aa6.76□□□□□ -1.33
CKAP5-202ENST00000354558 PIP4K2BP78356 416 aa6.76□□□□□ -1.33
CKAP5-202ENST00000354558 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.76□□□□□ -1.33
CKAP5-202ENST00000354558 SAFB2Q14151 953 aaKnown RBP eCLIP6.75□□□□□ -1.33
CKAP5-202ENST00000354558 RB1CC1Q8TDY2 1594 aa6.75□□□□□ -1.33
CKAP5-202ENST00000354558 EIF4G1Q04637 1599 aaKnown RBP6.75□□□□□ -1.33
CKAP5-202ENST00000354558 MAPK8IP3Q9UPT6 1336 aa6.75□□□□□ -1.33
CKAP5-202ENST00000354558 TPRNQ4KMQ1 711 aa6.75□□□□□ -1.33
CKAP5-202ENST00000354558 STK26Q9P289 416 aa6.74□□□□□ -1.33
CKAP5-202ENST00000354558 TRIM34Q9BYJ4 488 aa6.74□□□□□ -1.33
CKAP5-202ENST00000354558 FGD1P98174 961 aa6.74□□□□□ -1.33
CKAP5-202ENST00000354558 VPS53Q5VIR6 699 aa6.73□□□□□ -1.33
CKAP5-202ENST00000354558 CFDP1Q9UEE9 299 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-202ENST00000354558 TAF7LQ5H9L4 462 aa6.73□□□□□ -1.33
CKAP5-202ENST00000354558 FRAT2O75474 233 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-202ENST00000354558 TNNT2P45379 298 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-202ENST00000354558 CASC1Q6TDU7 716 aa6.73□□□□□ -1.33
CKAP5-202ENST00000354558 PAXIP1Q6ZW49 1069 aaPredicted RBP6.73□□□□□ -1.33
CKAP5-202ENST00000354558 NEUROD2Q15784 382 aa6.72□□□□□ -1.33
CKAP5-202ENST00000354558 RTF1Q92541 710 aaKnown RBP6.72□□□□□ -1.33
CKAP5-202ENST00000354558 NBR1Q14596 966 aa6.72□□□□□ -1.33
CKAP5-202ENST00000354558 SYTL4Q96C24 671 aaPredicted RBP6.72□□□□□ -1.33
CKAP5-202ENST00000354558 RRP7BPQ9NSQ0 103 aa6.71□□□□□ -1.33
CKAP5-202ENST00000354558 CHMP3Q9Y3E7 222 aa6.71□□□□□ -1.34
CKAP5-202ENST00000354558 NUDCQ9Y266 331 aa6.71□□□□□ -1.34
CKAP5-202ENST00000354558 NCLP19338 710 aaKnown RBP6.7□□□□□ -1.34
CKAP5-202ENST00000354558 NUTM2BA6NNL0 878 aaPredicted RBP6.7□□□□□ -1.34
CKAP5-202ENST00000354558 NUTM2EB1AL46 878 aaPredicted RBP6.7□□□□□ -1.34
CKAP5-202ENST00000354558 NUTM2AQ8IVF1 878 aaPredicted RBP6.7□□□□□ -1.34
CKAP5-202ENST00000354558 AMER1Q5JTC6 1135 aaPredicted RBP6.7□□□□□ -1.34
CKAP5-202ENST00000354558 FAM9BQ8IZU0 186 aa6.7□□□□□ -1.34
CKAP5-202ENST00000354558 KCNJ4P48050 445 aa6.7□□□□□ -1.34
CKAP5-202ENST00000354558 CSRNP3Q8WYN3 585 aa6.7□□□□□ -1.34
CKAP5-202ENST00000354558 U2SURPO15042 1029 aaKnown RBP6.7□□□□□ -1.34
CKAP5-202ENST00000354558 CCAR1Q8IX12 1150 aaKnown RBP6.69□□□□□ -1.34
CKAP5-202ENST00000354558 RAD21O60216 631 aa6.69□□□□□ -1.34
CKAP5-202ENST00000354558 NGDNQ8NEJ9 315 aaKnown RBP6.69□□□□□ -1.34
CKAP5-202ENST00000354558 TCEAL9Q9UHQ7 104 aa6.69□□□□□ -1.34
CKAP5-202ENST00000354558 CDCA8Q53HL2 280 aa6.68□□□□□ -1.34
CKAP5-202ENST00000354558 OSCARQ8IYS5 282 aa6.68□□□□□ -1.34
CKAP5-202ENST00000354558 GORABQ5T7V8 394 aa6.67□□□□□ -1.34
CKAP5-202ENST00000354558 ATF3P18847 181 aa6.67□□□□□ -1.34
CKAP5-202ENST00000354558 KNSTRNQ9Y448 316 aa6.67□□□□□ -1.34
CKAP5-202ENST00000354558 FTSJ3Q8IY81 847 aaKnown RBP6.67□□□□□ -1.34
CKAP5-202ENST00000354558 PNNQ9H307 717 aaKnown RBP6.67□□□□□ -1.34
CKAP5-202ENST00000354558 ANO8Q9HCE9 1232 aaPredicted RBP6.67□□□□□ -1.34
CKAP5-202ENST00000354558 GNL2Q13823 731 aaKnown RBP6.66□□□□□ -1.34
CKAP5-202ENST00000354558 HDGFL2Q7Z4V5 671 aaPredicted RBP6.66□□□□□ -1.34
CKAP5-202ENST00000354558 ANP32EQ9BTT0 268 aa6.66□□□□□ -1.34
CKAP5-202ENST00000354558 NUTM2FA1L443 756 aa6.65□□□□□ -1.34
CKAP5-202ENST00000354558 LTV1Q96GA3 475 aaPredicted RBP6.65□□□□□ -1.34
CKAP5-202ENST00000354558 ANP32AP39687 249 aaKnown RBP6.65□□□□□ -1.34
CKAP5-202ENST00000354558 CLIP1P30622 1438 aa6.65□□□□□ -1.34
CKAP5-202ENST00000354558 RSF1Q96T23 1441 aaPredicted RBP6.65□□□□□ -1.34
CKAP5-202ENST00000354558 PDE4CQ08493 712 aa6.65□□□□□ -1.34
CKAP5-202ENST00000354558 NUTM2DQ5VT03 806 aaPredicted RBP6.65□□□□□ -1.35
CKAP5-202ENST00000354558 SAMD1Q6SPF0 538 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 664.9 ms