RNA–Protein interactions for RNA: ENST00000351986.10

NPM1-202, Transcript of nucleophosmin 1, humanhuman

TSL 1 (best) BASIC

Gene NPM1, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-202ENST00000351986 ASTLQ6HA08 431 aaPredicted RBP14.91□□□□□ -0.02
NPM1-202ENST00000351986 METRNQ9UJH8 293 aa14.89□□□□□ -0.03
NPM1-202ENST00000351986 MIER1Q8N108 512 aa14.88□□□□□ -0.03
NPM1-202ENST00000351986 POTEJP0CG39 1038 aa14.85□□□□□ -0.03
NPM1-202ENST00000351986 KIF12Q96FN5 646 aa14.85□□□□□ -0.03
NPM1-202ENST00000351986 TRPC6Q9Y210 931 aa14.85□□□□□ -0.03
NPM1-202ENST00000351986 ATN1P54259 1190 aaPredicted RBP14.83□□□□□ -0.04
NPM1-202ENST00000351986 RASEFQ8IZ41 740 aa14.83□□□□□ -0.04
NPM1-202ENST00000351986 SLC39A7Q92504 469 aa14.8□□□□□ -0.04
NPM1-202ENST00000351986 PLSCR2Q9NRY7 297 aa14.79□□□□□ -0.04
NPM1-202ENST00000351986 MAP3K13O43283 966 aa14.78□□□□□ -0.04
NPM1-202ENST00000351986 C7P10643 843 aa14.78□□□□□ -0.04
NPM1-202ENST00000351986 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
NPM1-202ENST00000351986 BMP2KQ9NSY1 1161 aaPredicted RBP14.75□□□□□ -0.05
NPM1-202ENST00000351986 PLCD3Q8N3E9 789 aa14.72□□□□□ -0.05
NPM1-202ENST00000351986 POTEFA5A3E0 1075 aa14.7□□□□□ -0.06
NPM1-202ENST00000351986 POTEMA6NI47 508 aa14.68□□□□□ -0.06
NPM1-202ENST00000351986 POTEGQ6S5H5 508 aa14.64□□□□□ -0.07
NPM1-202ENST00000351986 FKBP8Q14318 412 aa14.62□□□□□ -0.07
NPM1-202ENST00000351986 TIE1P35590 1138 aa14.61□□□□□ -0.07
NPM1-202ENST00000351986 NUBP1P53384 320 aa14.61□□□□□ -0.07
NPM1-202ENST00000351986 TTLL13PA6NNM8 815 aa14.6□□□□□ -0.07
NPM1-202ENST00000351986 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
NPM1-202ENST00000351986 MAMSTRQ6ZN01 415 aa14.58□□□□□ -0.08
NPM1-202ENST00000351986 PCDHB13Q9Y5F0 798 aa14.57□□□□□ -0.08
NPM1-202ENST00000351986 LCE2DQ5TA82 110 aaPredicted RBP14.55□□□□□ -0.08
NPM1-202ENST00000351986 SCUBE2Q9NQ36 999 aa14.54□□□□□ -0.08
NPM1-202ENST00000351986 FAM163AQ96GL9 167 aaPredicted RBP14.53□□□□□ -0.08
NPM1-202ENST00000351986 IFNL1Q8IU54 200 aa14.51□□□□□ -0.09
NPM1-202ENST00000351986 TRIM35Q9UPQ4 493 aa14.51□□□□□ -0.09
NPM1-202ENST00000351986 SEC24BO95487 1268 aa14.49□□□□□ -0.09
NPM1-202ENST00000351986 ZBTB47Q9UFB7 747 aaPredicted RBP14.48□□□□□ -0.09
NPM1-202ENST00000351986 FAM212AQ96EL1 285 aa14.45□□□□□ -0.1
NPM1-202ENST00000351986 SGIP1Q9BQI5 828 aa14.45□□□□□ -0.1
NPM1-202ENST00000351986 TMEM106CQ9BVX2 250 aa14.42□□□□□ -0.1
NPM1-202ENST00000351986 PYGBP11216 843 aa14.37□□□□□ -0.11
NPM1-202ENST00000351986 IER5LQ5T953 404 aa14.37□□□□□ -0.11
NPM1-202ENST00000351986 DCAF8Q5TAQ9 597 aa14.37□□□□□ -0.11
NPM1-202ENST00000351986 PCDHB8Q9UN66 801 aa14.31□□□□□ -0.12
NPM1-202ENST00000351986 PCDH10Q9P2E7 1040 aa14.28□□□□□ -0.12
NPM1-202ENST00000351986 PLCG2P16885 1265 aa14.27□□□□□ -0.13
NPM1-202ENST00000351986 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.13
NPM1-202ENST00000351986 SLAIN1Q8ND83 568 aa14.27□□□□□ -0.13
NPM1-202ENST00000351986 FBXO3Q9UK99 471 aa14.23□□□□□ -0.13
NPM1-202ENST00000351986 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
NPM1-202ENST00000351986 ST18O60284 1047 aa14.17□□□□□ -0.14
NPM1-202ENST00000351986 VASPP50552 380 aaPredicted RBP14.17□□□□□ -0.14
NPM1-202ENST00000351986 OCEL1Q9H607 264 aa14.16□□□□□ -0.14
NPM1-202ENST00000351986 CDAN1Q8IWY9 1227 aa14.14□□□□□ -0.15
NPM1-202ENST00000351986 GSE1Q14687 1217 aa14.06□□□□□ -0.16
NPM1-202ENST00000351986 PDCD7Q8N8D1 485 aaKnown RBP14.05□□□□□ -0.16
NPM1-202ENST00000351986 ZNF467Q7Z7K2 595 aaPredicted RBP14.03□□□□□ -0.16
NPM1-202ENST00000351986 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.03□□□□□ -0.16
NPM1-202ENST00000351986 PSEN1P49768 467 aa13.99□□□□□ -0.17
NPM1-202ENST00000351986 CHRM1P11229 460 aaPredicted RBP13.98□□□□□ -0.17
NPM1-202ENST00000351986 GOLGA2Q08379 1002 aa13.98□□□□□ -0.17
NPM1-202ENST00000351986 MKRN3Q13064 507 aaKnown RBP13.98□□□□□ -0.17
NPM1-202ENST00000351986 MARVELD3Q96A59 401 aa13.98□□□□□ -0.17
NPM1-202ENST00000351986 IFNLR1Q8IU57 520 aaPredicted RBP13.95□□□□□ -0.18
NPM1-202ENST00000351986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.95□□□□□ -0.182e-17■■■□□ 16.1
NPM1-202ENST00000351986 DPY19L2Q6NUT2 758 aa13.92□□□□□ -0.18
NPM1-202ENST00000351986 CIZ1Q9ULV3 898 aaPredicted RBP13.91□□□□□ -0.18
NPM1-202ENST00000351986 C3orf67Q6ZVT6 689 aa13.9□□□□□ -0.18
NPM1-202ENST00000351986 SNPHO15079 494 aa13.89□□□□□ -0.19
NPM1-202ENST00000351986 SPOCK2Q92563 424 aa13.88□□□□□ -0.19
NPM1-202ENST00000351986 L3MBTL3Q96JM7 780 aaPredicted RBP13.87□□□□□ -0.19
NPM1-202ENST00000351986 TMEM121BQ9BXQ6 578 aaPredicted RBP13.87□□□□□ -0.19
NPM1-202ENST00000351986 PDAP1Q13442 181 aaKnown RBP13.86□□□□□ -0.19
NPM1-202ENST00000351986 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
NPM1-202ENST00000351986 ILDR1Q86SU0 546 aaPredicted RBP13.82□□□□□ -0.2
NPM1-202ENST00000351986 SPNS2Q8IVW8 549 aa13.8□□□□□ -0.2
NPM1-202ENST00000351986 POTEB3A0JP26 581 aa13.78□□□□□ -0.2
NPM1-202ENST00000351986 EMP3P54852 163 aa13.78□□□□□ -0.2
NPM1-202ENST00000351986 POTEBQ6S5H4 581 aa13.78□□□□□ -0.2
NPM1-202ENST00000351986 MMRN1Q13201 1228 aa13.77□□□□□ -0.21
NPM1-202ENST00000351986 FAM205CA6NFA0 338 aa13.72□□□□□ -0.21
NPM1-202ENST00000351986 BOLA1Q9Y3E2 137 aa13.72□□□□□ -0.21
NPM1-202ENST00000351986 HS3ST6Q96QI5 342 aa13.7□□□□□ -0.22
NPM1-202ENST00000351986 EFCAB3Q8N7B9 438 aa13.68□□□□□ -0.22
NPM1-202ENST00000351986 HOXB3P14651 431 aaPredicted RBP13.67□□□□□ -0.22
NPM1-202ENST00000351986 KRTAP3-3Q9BYR6 98 aa13.67□□□□□ -0.22
NPM1-202ENST00000351986 KRTAP3-2Q9BYR7 98 aa13.67□□□□□ -0.22
NPM1-202ENST00000351986 G3V3G9 751 aa13.66□□□□□ -0.22
NPM1-202ENST00000351986 RNF25Q96BH1 459 aaPredicted RBP13.56□□□□□ -0.24
NPM1-202ENST00000351986 TMEM92Q6UXU6 159 aa13.55□□□□□ -0.24
NPM1-202ENST00000351986 ZNF710Q8N1W2 664 aa13.54□□□□□ -0.24
NPM1-202ENST00000351986 HOXB1P14653 301 aaPredicted RBP13.52□□□□□ -0.25
NPM1-202ENST00000351986 TRIM41Q8WV44 630 aa13.52□□□□□ -0.25
NPM1-202ENST00000351986 MICALL2Q8IY33 904 aa13.51□□□□□ -0.25
NPM1-202ENST00000351986 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.5□□□□□ -0.25
NPM1-202ENST00000351986 ZFP91Q96JP5 570 aaPredicted RBP13.5□□□□□ -0.25
NPM1-202ENST00000351986 MS4A4AQ96JQ5 239 aa13.5□□□□□ -0.25
NPM1-202ENST00000351986 RIOK3O14730 519 aaKnown RBP13.48□□□□□ -0.25
NPM1-202ENST00000351986 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
NPM1-202ENST00000351986 PHF8Q9UPP1 1060 aa13.48□□□□□ -0.25
NPM1-202ENST00000351986 ERBB3P21860 1342 aa13.47□□□□□ -0.25
NPM1-202ENST00000351986 SOX12O15370 315 aa13.42□□□□□ -0.26
NPM1-202ENST00000351986 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
NPM1-202ENST00000351986 VGFO15240 615 aaPredicted RBP13.4□□□□□ -0.26
NPM1-202ENST00000351986 RIMBP2O15034 1052 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms