RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 BBXQ8WY36 941 aaPredicted RBP8.76□□□□□ -1.01
RFC1-201ENST00000349703 CENPBP07199 599 aaPredicted RBP8.76□□□□□ -1.01
RFC1-201ENST00000349703 ZBTB22O15209 634 aa8.75□□□□□ -1.01
RFC1-201ENST00000349703 RAD21O60216 631 aa8.72□□□□□ -1.01
RFC1-201ENST00000349703 GOLGA2Q08379 1002 aa8.72□□□□□ -1.01
RFC1-201ENST00000349703 TRIM26Q12899 539 aaPredicted RBP8.72□□□□□ -1.01
RFC1-201ENST00000349703 STK25O00506 426 aa8.71□□□□□ -1.01
RFC1-201ENST00000349703 WWC1Q8IX03 1113 aa8.71□□□□□ -1.01
RFC1-201ENST00000349703 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
RFC1-201ENST00000349703 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
RFC1-201ENST00000349703 G3V3G9 751 aa8.69□□□□□ -1.02
RFC1-201ENST00000349703 ATXN8OSP0DMR3 200 aa8.68□□□□□ -1.02
RFC1-201ENST00000349703 PPARGC1BQ86YN6 1023 aaKnown RBP8.68□□□□□ -1.02
RFC1-201ENST00000349703 RYDENQ9NUL5 291 aaKnown RBP8.68□□□□□ -1.02
RFC1-201ENST00000349703 ARID4BQ4LE39 1312 aaPredicted RBP8.67□□□□□ -1.02
RFC1-201ENST00000349703 P3H3Q8IVL6 736 aa8.66□□□□□ -1.02
RFC1-201ENST00000349703 SMYD5Q6GMV2 418 aa8.66□□□□□ -1.02
RFC1-201ENST00000349703 STK24Q9Y6E0 443 aa8.65□□□□□ -1.02
RFC1-201ENST00000349703 MAPK8IP2Q13387 824 aaPredicted RBP8.65□□□□□ -1.02
RFC1-201ENST00000349703 FBXW7Q969H0 707 aa8.63□□□□□ -1.03
RFC1-201ENST00000349703 DCAF1Q9Y4B6 1507 aa8.62□□□□□ -1.03
RFC1-201ENST00000349703 RNF216Q9NWF9 866 aaPredicted RBP8.59□□□□□ -1.03
RFC1-201ENST00000349703 CLEC11AQ9Y240 323 aa8.58□□□□□ -1.04
RFC1-201ENST00000349703 ZNF692Q9BU19 519 aaPredicted RBP8.57□□□□□ -1.04
RFC1-201ENST00000349703 ACIN1Q9UKV3 1341 aaKnown RBP8.56□□□□□ -1.04
RFC1-201ENST00000349703 RBM25P49756 843 aaKnown RBP8.56□□□□□ -1.04
RFC1-201ENST00000349703 TMEM132AQ24JP5 1023 aa8.55□□□□□ -1.04
RFC1-201ENST00000349703 RSPH6AQ9H0K4 717 aa8.54□□□□□ -1.04
RFC1-201ENST00000349703 EIF5BO60841 1220 aaKnown RBP8.5□□□□□ -1.05
RFC1-201ENST00000349703 PRM3Q9NNZ6 103 aa8.5□□□□□ -1.05
RFC1-201ENST00000349703 CCDC180Q9P1Z9 1646 aa8.5□□□□□ -1.05
RFC1-201ENST00000349703 APBB1O00213 710 aa8.49□□□□□ -1.05
RFC1-201ENST00000349703 IL27Q8NEV9 243 aa8.48□□□□□ -1.05
RFC1-201ENST00000349703 TTLL12Q14166 644 aaPredicted RBP8.48□□□□□ -1.05
RFC1-201ENST00000349703 ZBTB12Q9Y330 459 aaPredicted RBP8.47□□□□□ -1.05
RFC1-201ENST00000349703 PPM1GO15355 546 aaPredicted RBP8.47□□□□□ -1.05
RFC1-201ENST00000349703 ABCB7O75027 752 aa8.47□□□□□ -1.05
RFC1-201ENST00000349703 STAG3Q9UJ98 1225 aa8.47□□□□□ -1.05
RFC1-201ENST00000349703 ZNF316A6NFI3 1004 aaPredicted RBP8.47□□□□□ -1.05
RFC1-201ENST00000349703 UBTFP17480 764 aaKnown RBP8.46□□□□□ -1.06
RFC1-201ENST00000349703 FAM212AQ96EL1 285 aa8.45□□□□□ -1.06
RFC1-201ENST00000349703 TMCO4Q5TGY1 634 aa8.45□□□□□ -1.06
RFC1-201ENST00000349703 LMOD2Q6P5Q4 547 aa8.45□□□□□ -1.06
RFC1-201ENST00000349703 KCTD17Q8N5Z5 321 aa8.45□□□□□ -1.06
RFC1-201ENST00000349703 ZNF219Q9P2Y4 722 aaPredicted RBP8.45□□□□□ -1.06
RFC1-201ENST00000349703 GSE1Q14687 1217 aa8.42□□□□□ -1.06
RFC1-201ENST00000349703 PAK3O75914 559 aaPredicted RBP8.41□□□□□ -1.06
RFC1-201ENST00000349703 MYO15BQ96JP2 1530 aa8.41□□□□□ -1.06
RFC1-201ENST00000349703 NUTM2FA1L443 756 aa8.4□□□□□ -1.07
RFC1-201ENST00000349703 TSC1Q92574 1164 aa8.4□□□□□ -1.07
RFC1-201ENST00000349703 RBM19Q9Y4C8 960 aaKnown RBP8.39□□□□□ -1.07
RFC1-201ENST00000349703 LOC105371045A0A1W2PR82 267 aa8.38□□□□□ -1.07
RFC1-201ENST00000349703 DIEXFQ68CQ4 756 aaKnown RBP8.37□□□□□ -1.07
RFC1-201ENST00000349703 CCDC136Q96JN2 1154 aa8.36□□□□□ -1.07
RFC1-201ENST00000349703 POLA2Q14181 598 aa8.35□□□□□ -1.07
RFC1-201ENST00000349703 YTHDC1Q96MU7 727 aaKnown RBP8.35□□□□□ -1.07
RFC1-201ENST00000349703 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.08
RFC1-201ENST00000349703 CLSPNQ9HAW4 1339 aa8.33□□□□□ -1.08
RFC1-201ENST00000349703 ARID3CA6NKF2 412 aa8.33□□□□□ -1.08
RFC1-201ENST00000349703 ZNF526Q8TF50 670 aaPredicted RBP8.33□□□□□ -1.08
RFC1-201ENST00000349703 CNGB1Q14028 1251 aaPredicted RBP8.33□□□□□ -1.08
RFC1-201ENST00000349703 E9PSI1 815 aa8.32□□□□□ -1.08
RFC1-201ENST00000349703 PCMTD1Q96MG8 357 aaPredicted RBP8.3□□□□□ -1.08
RFC1-201ENST00000349703 PABPN1Q86U42 306 aaKnown RBP eCLIP8.29□□□□□ -1.087e-7■□□□□ 10.4
RFC1-201ENST00000349703 KDM2AQ9Y2K7 1162 aa8.29□□□□□ -1.08
RFC1-201ENST00000349703 NEUROD1Q13562 356 aa8.29□□□□□ -1.08
RFC1-201ENST00000349703 RGL2O15211 777 aa8.29□□□□□ -1.08
RFC1-201ENST00000349703 ZCCHC6Q5VYS8 1495 aaKnown RBP8.28□□□□□ -1.08
RFC1-201ENST00000349703 HSP90B1P14625 803 aaKnown RBP8.28□□□□□ -1.08
RFC1-201ENST00000349703 PDE4CQ08493 712 aa8.28□□□□□ -1.08
RFC1-201ENST00000349703 AAMPQ13685 434 aa8.28□□□□□ -1.08
RFC1-201ENST00000349703 CSB-PGBD3P0DP91 1061 aa8.26□□□□□ -1.09
RFC1-201ENST00000349703 BCL11BQ9C0K0 894 aaPredicted RBP8.26□□□□□ -1.09
RFC1-201ENST00000349703 IFNLR1Q8IU57 520 aaPredicted RBP8.26□□□□□ -1.09
RFC1-201ENST00000349703 RFX1P22670 979 aa8.26□□□□□ -1.09
RFC1-201ENST00000349703 PSMD1Q99460 953 aa8.25□□□□□ -1.09
RFC1-201ENST00000349703 BIN2Q9UBW5 565 aaPredicted RBP8.25□□□□□ -1.09
RFC1-201ENST00000349703 CLSTN1O94985 981 aa8.23□□□□□ -1.09
RFC1-201ENST00000349703 GZF1Q9H116 711 aaPredicted RBP8.23□□□□□ -1.09
RFC1-201ENST00000349703 NEFMP07197 916 aa8.23□□□□□ -1.09
RFC1-201ENST00000349703 TSPYL2Q9H2G4 693 aaPredicted RBP8.23□□□□□ -1.09
RFC1-201ENST00000349703 TTC16Q8NEE8 873 aa8.23□□□□□ -1.09
RFC1-201ENST00000349703 ZMYND15Q9H091 742 aa8.23□□□□□ -1.09
RFC1-201ENST00000349703 TMC1Q8TDI8 760 aa8.22□□□□□ -1.09
RFC1-201ENST00000349703 SLC24A3Q9HC58 644 aa8.22□□□□□ -1.09
RFC1-201ENST00000349703 SOX12O15370 315 aa8.22□□□□□ -1.09
RFC1-201ENST00000349703 GPIHBP1Q8IV16 184 aa8.2□□□□□ -1.1
RFC1-201ENST00000349703 PTMSP20962 102 aa8.2□□□□□ -1.1
RFC1-201ENST00000349703 NPM1P06748 294 aaKnown RBP eCLIP8.19□□□□□ -1.1
RFC1-201ENST00000349703 HMGB1P1B2RPK0 211 aaPredicted RBP8.19□□□□□ -1.1
RFC1-201ENST00000349703 NEFLP07196 543 aa8.19□□□□□ -1.1
RFC1-201ENST00000349703 ZNF777Q9ULD5 760 aaPredicted RBP8.19□□□□□ -1.1
RFC1-201ENST00000349703 VGFO15240 615 aaPredicted RBP8.18□□□□□ -1.1
RFC1-201ENST00000349703 RIOK3O14730 519 aaKnown RBP8.18□□□□□ -1.1
RFC1-201ENST00000349703 PRR29P0C7W0 189 aa8.17□□□□□ -1.1
RFC1-201ENST00000349703 APPP05067 770 aa8.16□□□□□ -1.1
RFC1-201ENST00000349703 CALR3Q96L12 384 aaKnown RBP8.15□□□□□ -1.1
RFC1-201ENST00000349703 LAS1LQ9Y4W2 734 aaKnown RBP8.15□□□□□ -1.1
RFC1-201ENST00000349703 NUTM2BA6NNL0 878 aaPredicted RBP8.15□□□□□ -1.11
RFC1-201ENST00000349703 NUTM2EB1AL46 878 aaPredicted RBP8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms