RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 CHRM1P11229 460 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-204ENST00000349311 TRIM41Q8WV44 630 aa15.88■□□□□ 0.13
UBE2D3-204ENST00000349311 TSPYL2Q9H2G4 693 aaPredicted RBP15.88■□□□□ 0.13
UBE2D3-204ENST00000349311 EVX2Q03828 476 aa15.82■□□□□ 0.12
UBE2D3-204ENST00000349311 PAK3O75914 559 aaPredicted RBP15.81■□□□□ 0.12
UBE2D3-204ENST00000349311 ECM2O94769 699 aaPredicted RBP15.8■□□□□ 0.12
UBE2D3-204ENST00000349311 ZRANB1Q9UGI0 708 aa15.8■□□□□ 0.12
UBE2D3-204ENST00000349311 HAX1O00165 279 aa15.79■□□□□ 0.12
UBE2D3-204ENST00000349311 ZNF579Q8NAF0 562 aaKnown RBP15.78■□□□□ 0.12
UBE2D3-204ENST00000349311 PYGBP11216 843 aa15.74■□□□□ 0.11
UBE2D3-204ENST00000349311 RNF25Q96BH1 459 aaPredicted RBP15.73■□□□□ 0.11
UBE2D3-204ENST00000349311 KIF12Q96FN5 646 aa15.73■□□□□ 0.11
UBE2D3-204ENST00000349311 RGL2O15211 777 aa15.71■□□□□ 0.11
UBE2D3-204ENST00000349311 SGIP1Q9BQI5 828 aa15.7■□□□□ 0.1
UBE2D3-204ENST00000349311 PHF12Q96QT6 1004 aa15.67■□□□□ 0.1
UBE2D3-204ENST00000349311 MAP3K13O43283 966 aa15.65■□□□□ 0.1
UBE2D3-204ENST00000349311 NISCHQ9Y2I1 1504 aa15.63■□□□□ 0.09
UBE2D3-204ENST00000349311 CLCN6P51797 869 aa15.61■□□□□ 0.09
UBE2D3-204ENST00000349311 RIOK3O14730 519 aaKnown RBP15.59■□□□□ 0.09
UBE2D3-204ENST00000349311 ZNF467Q7Z7K2 595 aaPredicted RBP15.57■□□□□ 0.08
UBE2D3-204ENST00000349311 IFNL1Q8IU54 200 aa15.57■□□□□ 0.08
UBE2D3-204ENST00000349311 PCDHB13Q9Y5F0 798 aa15.57■□□□□ 0.08
UBE2D3-204ENST00000349311 MS4A3Q96HJ5 214 aa15.53■□□□□ 0.08
UBE2D3-204ENST00000349311 PCDHB8Q9UN66 801 aa15.53■□□□□ 0.08
UBE2D3-204ENST00000349311 VGFO15240 615 aaPredicted RBP15.51■□□□□ 0.07
UBE2D3-204ENST00000349311 GALR2O43603 387 aaPredicted RBP15.48■□□□□ 0.07
UBE2D3-204ENST00000349311 GABBR2O75899 941 aa15.48■□□□□ 0.07
UBE2D3-204ENST00000349311 SP7Q8TDD2 431 aaPredicted RBP15.46■□□□□ 0.07
UBE2D3-204ENST00000349311 TAOK2Q9UL54 1235 aa15.45■□□□□ 0.06
UBE2D3-204ENST00000349311 PDAP1Q13442 181 aaKnown RBP15.44■□□□□ 0.06
UBE2D3-204ENST00000349311 TRPC6Q9Y210 931 aa15.44■□□□□ 0.06
UBE2D3-204ENST00000349311 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.42■□□□□ 0.06
UBE2D3-204ENST00000349311 ZFP91Q96JP5 570 aaPredicted RBP15.42■□□□□ 0.06
UBE2D3-204ENST00000349311 DNAJC5Q9H3Z4 198 aa15.42■□□□□ 0.06
UBE2D3-204ENST00000349311 HS6ST3Q8IZP7 471 aa15.41■□□□□ 0.06
UBE2D3-204ENST00000349311 PSEN1P49768 467 aa15.39■□□□□ 0.05
UBE2D3-204ENST00000349311 TIE1P35590 1138 aa15.38■□□□□ 0.05
UBE2D3-204ENST00000349311 DCAF8L2P0C7V8 631 aa15.35■□□□□ 0.05
UBE2D3-204ENST00000349311 CHGAP10645 457 aaKnown RBP15.33■□□□□ 0.04
UBE2D3-204ENST00000349311 BMP2KQ9NSY1 1161 aaPredicted RBP15.32■□□□□ 0.04
UBE2D3-204ENST00000349311 TTLL13PA6NNM8 815 aa15.3■□□□□ 0.04
UBE2D3-204ENST00000349311 STK25O00506 426 aa15.3■□□□□ 0.04
UBE2D3-204ENST00000349311 BCL11BQ9C0K0 894 aaPredicted RBP15.3■□□□□ 0.04
UBE2D3-204ENST00000349311 ASTLQ6HA08 431 aaPredicted RBP15.29■□□□□ 0.04
UBE2D3-204ENST00000349311 TMEM106CQ9BVX2 250 aa15.27■□□□□ 0.04
UBE2D3-204ENST00000349311 BBXQ8WY36 941 aaPredicted RBP15.26■□□□□ 0.03
UBE2D3-204ENST00000349311 ATMINO43313 823 aaPredicted RBP15.25■□□□□ 0.03
UBE2D3-204ENST00000349311 STK24Q9Y6E0 443 aa15.25■□□□□ 0.03
UBE2D3-204ENST00000349311 POTEIP0CG38 1075 aa15.23■□□□□ 0.03
UBE2D3-204ENST00000349311 NKX1-1Q15270 411 aaPredicted RBP15.22■□□□□ 0.03
UBE2D3-204ENST00000349311 ATN1P54259 1190 aaPredicted RBP15.21■□□□□ 0.03
UBE2D3-204ENST00000349311 CABP2Q9NPB3 220 aa15.17■□□□□ 0.02
UBE2D3-204ENST00000349311 TRIM35Q9UPQ4 493 aa15.16■□□□□ 0.02
UBE2D3-204ENST00000349311 ILDR1Q86SU0 546 aaPredicted RBP15.15■□□□□ 0.02
UBE2D3-204ENST00000349311 EFCAB3Q8N7B9 438 aa15.15■□□□□ 0.02
UBE2D3-204ENST00000349311 PELP1Q8IZL8 1130 aaKnown RBP15.14■□□□□ 0.01
UBE2D3-204ENST00000349311 DCBLD2Q96PD2 775 aa15.14■□□□□ 0.01
UBE2D3-204ENST00000349311 SOX12O15370 315 aa15.11■□□□□ 0.01
UBE2D3-204ENST00000349311 MFRPQ9BY79 579 aa15.1■□□□□ 0.01
UBE2D3-204ENST00000349311 GTPBP6O43824 516 aaPredicted RBP15.07■□□□□ 0
UBE2D3-204ENST00000349311 IER5LQ5T953 404 aa15.07■□□□□ 0
UBE2D3-204ENST00000349311 FBXO22Q8NEZ5 403 aa15.07■□□□□ 0
UBE2D3-204ENST00000349311 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.06■□□□□ 0
UBE2D3-204ENST00000349311 IRX5P78411 483 aaPredicted RBP15.03■□□□□ -0
UBE2D3-204ENST00000349311 MKRN3Q13064 507 aaKnown RBP15.03■□□□□ -0
UBE2D3-204ENST00000349311 PLCB2Q00722 1185 aa15.02■□□□□ -0
UBE2D3-204ENST00000349311 GOLGA2Q08379 1002 aa15.02■□□□□ -0
UBE2D3-204ENST00000349311 PHF8Q9UPP1 1060 aa15.02■□□□□ -0
UBE2D3-204ENST00000349311 SPRYD3Q8NCJ5 442 aa15□□□□□ -0.01
UBE2D3-204ENST00000349311 MS4A4AQ96JQ5 239 aa15□□□□□ -0.01
UBE2D3-204ENST00000349311 NLRP6P59044 892 aa14.99□□□□□ -0.01
UBE2D3-204ENST00000349311 SLC39A7Q92504 469 aa14.99□□□□□ -0.01
UBE2D3-204ENST00000349311 POTEFA5A3E0 1075 aa14.98□□□□□ -0.01
UBE2D3-204ENST00000349311 C7P10643 843 aa14.97□□□□□ -0.01
UBE2D3-204ENST00000349311 RYDENQ9NUL5 291 aaKnown RBP14.97□□□□□ -0.01
UBE2D3-204ENST00000349311 PAXIP1Q6ZW49 1069 aaPredicted RBP14.96□□□□□ -0.01
UBE2D3-204ENST00000349311 PDCD7Q8N8D1 485 aaKnown RBP14.96□□□□□ -0.01
UBE2D3-204ENST00000349311 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.94□□□□□ -0.02
UBE2D3-204ENST00000349311 OCEL1Q9H607 264 aa14.93□□□□□ -0.02
UBE2D3-204ENST00000349311 COLQQ9Y215 455 aaPredicted RBP14.92□□□□□ -0.02
UBE2D3-204ENST00000349311 METRNQ9UJH8 293 aa14.91□□□□□ -0.02
UBE2D3-204ENST00000349311 CFAP44Q96MT7 982 aa14.9□□□□□ -0.02
UBE2D3-204ENST00000349311 PPP1R37O75864 691 aa14.88□□□□□ -0.03
UBE2D3-204ENST00000349311 DPY19L2Q6NUT2 758 aa14.85□□□□□ -0.03
UBE2D3-204ENST00000349311 PLCG2P16885 1265 aa14.82□□□□□ -0.04
UBE2D3-204ENST00000349311 SEC24BO95487 1268 aa14.8□□□□□ -0.04
UBE2D3-204ENST00000349311 TMEM121BQ9BXQ6 578 aaPredicted RBP14.79□□□□□ -0.04
UBE2D3-204ENST00000349311 POTEB2H3BUK9 544 aa14.74□□□□□ -0.05
UBE2D3-204ENST00000349311 TSHZ2Q9NRE2 1034 aa14.73□□□□□ -0.05
UBE2D3-204ENST00000349311 POTEJP0CG39 1038 aa14.71□□□□□ -0.05
UBE2D3-204ENST00000349311 MICALL2Q8IY33 904 aa14.71□□□□□ -0.05
UBE2D3-204ENST00000349311 L3MBTL3Q96JM7 780 aaPredicted RBP14.71□□□□□ -0.05
UBE2D3-204ENST00000349311 BOLA1Q9Y3E2 137 aa14.71□□□□□ -0.05
UBE2D3-204ENST00000349311 HAP1P54257 671 aaPredicted RBP14.67□□□□□ -0.06
UBE2D3-204ENST00000349311 CADPS2Q86UW7 1296 aa14.67□□□□□ -0.06
UBE2D3-204ENST00000349311 SLC24A1O60721 1099 aa14.66□□□□□ -0.06
UBE2D3-204ENST00000349311 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
UBE2D3-204ENST00000349311 CRISPLD2Q9H0B8 497 aa14.59□□□□□ -0.07
UBE2D3-204ENST00000349311 NCKAP5LQ9HCH0 1330 aa14.58□□□□□ -0.08
UBE2D3-204ENST00000349311 KIF3CO14782 793 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms