RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 MYH16Q9H6N6 1097 aa16.12■□□□□ 0.17
SEMA6A-202ENST00000343348 TULP1O00294 542 aaPredicted RBP16.1■□□□□ 0.17
SEMA6A-202ENST00000343348 DNTTIP2Q5QJE6 756 aaKnown RBP16.1■□□□□ 0.17
SEMA6A-202ENST00000343348 PTMAP06454 111 aaKnown RBP16.09■□□□□ 0.17
SEMA6A-202ENST00000343348 BECN1Q14457 450 aa16.09■□□□□ 0.17
SEMA6A-202ENST00000343348 LAS1LQ9Y4W2 734 aaKnown RBP16.09■□□□□ 0.17
SEMA6A-202ENST00000343348 DDRGK1Q96HY6 314 aa16.09■□□□□ 0.17
SEMA6A-202ENST00000343348 NAP1L5Q96NT1 182 aaPredicted RBP16.08■□□□□ 0.17
SEMA6A-202ENST00000343348 TAOK2Q9UL54 1235 aa16.06■□□□□ 0.16
SEMA6A-202ENST00000343348 ANP32EQ9BTT0 268 aa16.06■□□□□ 0.16
SEMA6A-202ENST00000343348 TNNT2P45379 298 aaPredicted RBP16.04■□□□□ 0.16
SEMA6A-202ENST00000343348 SUPT16HQ9Y5B9 1047 aaKnown RBP16.03■□□□□ 0.16
SEMA6A-202ENST00000343348 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.15
SEMA6A-202ENST00000343348 GOLGA6L22H0YM25 854 aa16.01■□□□□ 0.15
SEMA6A-202ENST00000343348 PLCB2Q00722 1185 aa16■□□□□ 0.15
SEMA6A-202ENST00000343348 C14orf37Q86TY3 774 aa16■□□□□ 0.15
SEMA6A-202ENST00000343348 ZRSR1Q15695 479 aaKnown RBP15.95■□□□□ 0.14
SEMA6A-202ENST00000343348 RRP7BPQ9NSQ0 103 aa15.93■□□□□ 0.14
SEMA6A-202ENST00000343348 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
SEMA6A-202ENST00000343348 EIF4G2P78344 907 aaKnown RBP eCLIP15.93■□□□□ 0.14
SEMA6A-202ENST00000343348 RGS3P49796 1198 aa15.93■□□□□ 0.14
SEMA6A-202ENST00000343348 ARID4BQ4LE39 1312 aaPredicted RBP15.92■□□□□ 0.14
SEMA6A-202ENST00000343348 PPM1GO15355 546 aaPredicted RBP15.92■□□□□ 0.14
SEMA6A-202ENST00000343348 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
SEMA6A-202ENST00000343348 RGL3Q3MIN7 710 aa15.9■□□□□ 0.14
SEMA6A-202ENST00000343348 ERICH6BQ5W0A0 696 aa15.89■□□□□ 0.13
SEMA6A-202ENST00000343348 FTSJ3Q8IY81 847 aaKnown RBP15.89■□□□□ 0.13
SEMA6A-202ENST00000343348 NOP58Q9Y2X3 529 aaKnown RBP15.87■□□□□ 0.13
SEMA6A-202ENST00000343348 SPRYD3Q8NCJ5 442 aa15.86■□□□□ 0.13
SEMA6A-202ENST00000343348 CASC1Q6TDU7 716 aa15.86■□□□□ 0.13
SEMA6A-202ENST00000343348 TSPY4P0CV99 314 aa15.85■□□□□ 0.13
SEMA6A-202ENST00000343348 TSPY10P0CW01 314 aa15.85■□□□□ 0.13
SEMA6A-202ENST00000343348 NPM1P06748 294 aaKnown RBP eCLIP15.85■□□□□ 0.13
SEMA6A-202ENST00000343348 B4GALNT3Q6L9W6 998 aa15.84■□□□□ 0.13
SEMA6A-202ENST00000343348 FRAT1Q92837 279 aaPredicted RBP15.84■□□□□ 0.13
SEMA6A-202ENST00000343348 HSP90AB1P08238 724 aaKnown RBP15.83■□□□□ 0.13
SEMA6A-202ENST00000343348 MTUS2Q5JR59 1369 aa15.81■□□□□ 0.12
SEMA6A-202ENST00000343348 ARID3AQ99856 593 aa15.81■□□□□ 0.12
SEMA6A-202ENST00000343348 NAP1L2Q9ULW6 460 aaPredicted RBP15.8■□□□□ 0.12
SEMA6A-202ENST00000343348 DEKP35659 375 aaKnown RBP15.78■□□□□ 0.12
SEMA6A-202ENST00000343348 PPP1R15AO75807 674 aaPredicted RBP15.76■□□□□ 0.11
SEMA6A-202ENST00000343348 SCRIBQ14160 1630 aa15.76■□□□□ 0.11
SEMA6A-202ENST00000343348 PPP4R2Q9NY27 417 aa15.76■□□□□ 0.11
SEMA6A-202ENST00000343348 KNSTRNQ9Y448 316 aa15.76■□□□□ 0.11
SEMA6A-202ENST00000343348 NCBP3Q53F19 620 aaKnown RBP15.75■□□□□ 0.11
SEMA6A-202ENST00000343348 CC2D1BQ5T0F9 858 aaKnown RBP15.75■□□□□ 0.11
SEMA6A-202ENST00000343348 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.75■□□□□ 0.11
SEMA6A-202ENST00000343348 CFAP53Q96M91 514 aa15.74■□□□□ 0.11
SEMA6A-202ENST00000343348 KCNH8Q96L42 1107 aa15.73■□□□□ 0.11
SEMA6A-202ENST00000343348 FGD1P98174 961 aa15.72■□□□□ 0.11
SEMA6A-202ENST00000343348 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
SEMA6A-202ENST00000343348 OS9Q13438 667 aaPredicted RBP15.7■□□□□ 0.1
SEMA6A-202ENST00000343348 KCNJ4P48050 445 aa15.7■□□□□ 0.1
SEMA6A-202ENST00000343348 MSNP26038 577 aaKnown RBP15.7■□□□□ 0.1
SEMA6A-202ENST00000343348 CARD11Q9BXL7 1154 aa15.7■□□□□ 0.1
SEMA6A-202ENST00000343348 GOLGA6L6A8MZA4 724 aa15.69■□□□□ 0.1
SEMA6A-202ENST00000343348 DRC7Q8IY82 874 aa15.69■□□□□ 0.1
SEMA6A-202ENST00000343348 MAPK8IP3Q9UPT6 1336 aa15.68■□□□□ 0.1
SEMA6A-202ENST00000343348 SIN3AQ96ST3 1273 aa15.68■□□□□ 0.1
SEMA6A-202ENST00000343348 LMOD2Q6P5Q4 547 aa15.65■□□□□ 0.1
SEMA6A-202ENST00000343348 MYO15BQ96JP2 1530 aa15.65■□□□□ 0.1
SEMA6A-202ENST00000343348 U2SURPO15042 1029 aaKnown RBP15.65■□□□□ 0.1
SEMA6A-202ENST00000343348 HSCBQ8IWL3 235 aa15.65■□□□□ 0.1
SEMA6A-202ENST00000343348 GZF1Q9H116 711 aaPredicted RBP15.65■□□□□ 0.1
SEMA6A-202ENST00000343348 CHAF1AQ13111 956 aaPredicted RBP15.65■□□□□ 0.1
SEMA6A-202ENST00000343348 CLIP1P30622 1438 aa15.65■□□□□ 0.1
SEMA6A-202ENST00000343348 GOLGA6L4A6NEF3 574 aa15.64■□□□□ 0.09
SEMA6A-202ENST00000343348 NPHP1O15259 732 aa15.62■□□□□ 0.09
SEMA6A-202ENST00000343348 RBM19Q9Y4C8 960 aaKnown RBP15.62■□□□□ 0.09
SEMA6A-202ENST00000343348 CLSTN1O94985 981 aa15.62■□□□□ 0.09
SEMA6A-202ENST00000343348 ZCCHC6Q5VYS8 1495 aaKnown RBP15.6■□□□□ 0.09
SEMA6A-202ENST00000343348 CHMP7Q8WUX9 453 aaPredicted RBP15.6■□□□□ 0.09
SEMA6A-202ENST00000343348 APBB1O00213 710 aa15.59■□□□□ 0.09
SEMA6A-202ENST00000343348 SOX12O15370 315 aa15.59■□□□□ 0.09
SEMA6A-202ENST00000343348 L1TD1Q5T7N2 865 aaKnown RBP15.58■□□□□ 0.08
SEMA6A-202ENST00000343348 NRDCO43847 1150 aa15.58■□□□□ 0.08
SEMA6A-202ENST00000343348 NUDCQ9Y266 331 aa15.56■□□□□ 0.08
SEMA6A-202ENST00000343348 CDCA8Q53HL2 280 aa15.56■□□□□ 0.08
SEMA6A-202ENST00000343348 GOLGA2Q08379 1002 aa15.55■□□□□ 0.08
SEMA6A-202ENST00000343348 POGKQ9P215 609 aa15.54■□□□□ 0.08
SEMA6A-202ENST00000343348 SLKQ9H2G2 1235 aaPredicted RBP15.54■□□□□ 0.08
SEMA6A-202ENST00000343348 CCDC180Q9P1Z9 1646 aa15.52■□□□□ 0.07
SEMA6A-202ENST00000343348 ISY1Q9ULR0 285 aaKnown RBP15.51■□□□□ 0.07
SEMA6A-202ENST00000343348 CEP162Q5TB80 1403 aa15.51■□□□□ 0.07
SEMA6A-202ENST00000343348 MCCP23508 829 aa15.48■□□□□ 0.07
SEMA6A-202ENST00000343348 PLEKHD1A6NEE1 506 aa15.48■□□□□ 0.07
SEMA6A-202ENST00000343348 GNL2Q13823 731 aaKnown RBP15.48■□□□□ 0.07
SEMA6A-202ENST00000343348 CFDP1Q9UEE9 299 aaPredicted RBP15.47■□□□□ 0.07
SEMA6A-202ENST00000343348 SAFB2Q14151 953 aaKnown RBP eCLIP15.47■□□□□ 0.07
SEMA6A-202ENST00000343348 MS4A1P11836 297 aa15.46■□□□□ 0.07
SEMA6A-202ENST00000343348 RSF1Q96T23 1441 aaPredicted RBP15.46■□□□□ 0.06
SEMA6A-202ENST00000343348 PDE4CQ08493 712 aa15.46■□□□□ 0.06
SEMA6A-202ENST00000343348 FOXD4L1Q9NU39 408 aa15.45■□□□□ 0.06
SEMA6A-202ENST00000343348 CHMP4BQ9H444 224 aaKnown RBP15.45■□□□□ 0.06
SEMA6A-202ENST00000343348 PNNQ9H307 717 aaKnown RBP15.44■□□□□ 0.06
SEMA6A-202ENST00000343348 DCAF11Q8TEB1 546 aa15.44■□□□□ 0.06
SEMA6A-202ENST00000343348 NOC3LQ8WTT2 800 aaKnown RBP15.43■□□□□ 0.06
SEMA6A-202ENST00000343348 KIAA2012Q0VF49 1180 aa15.42■□□□□ 0.06
SEMA6A-202ENST00000343348 TNNT3P45378 269 aaPredicted RBP15.42■□□□□ 0.06
SEMA6A-202ENST00000343348 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms