RNA–Protein interactions for RNA: ENST00000342895.7

LRRC39-201, Transcript of leucine rich repeat containing 39, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRC39, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39-201ENST00000342895 LCE2DQ5TA82 110 aaPredicted RBP8.96□□□□□ -0.98
LRRC39-201ENST00000342895 CD44P16070 742 aaKnown RBP8.95□□□□□ -0.98
LRRC39-201ENST00000342895 KLHL34Q8N239 644 aa8.95□□□□□ -0.98
LRRC39-201ENST00000342895 NUBP1P53384 320 aa8.94□□□□□ -0.98
LRRC39-201ENST00000342895 PAK3O75914 559 aaPredicted RBP8.91□□□□□ -0.98
LRRC39-201ENST00000342895 SPOCK2Q92563 424 aa8.91□□□□□ -0.98
LRRC39-201ENST00000342895 SPNS2Q8IVW8 549 aa8.89□□□□□ -0.99
LRRC39-201ENST00000342895 RASEFQ8IZ41 740 aa8.89□□□□□ -0.99
LRRC39-201ENST00000342895 ZNF579Q8NAF0 562 aaKnown RBP8.87□□□□□ -0.99
LRRC39-201ENST00000342895 ZRANB1Q9UGI0 708 aa8.87□□□□□ -0.99
LRRC39-201ENST00000342895 CLCN6P51797 869 aa8.87□□□□□ -0.99
LRRC39-201ENST00000342895 FAM212AQ96EL1 285 aa8.86□□□□□ -0.99
LRRC39-201ENST00000342895 TSPYL2Q9H2G4 693 aaPredicted RBP8.84□□□□□ -0.99
LRRC39-201ENST00000342895 GSE1Q14687 1217 aa8.83□□□□□ -1
LRRC39-201ENST00000342895 CCDC61Q9Y6R9 512 aa8.83□□□□□ -1
LRRC39-201ENST00000342895 DCAF8Q5TAQ9 597 aa8.81□□□□□ -1
LRRC39-201ENST00000342895 FAM163AQ96GL9 167 aaPredicted RBP8.78□□□□□ -1
LRRC39-201ENST00000342895 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
LRRC39-201ENST00000342895 TRIM41Q8WV44 630 aa8.75□□□□□ -1.01
LRRC39-201ENST00000342895 SGIP1Q9BQI5 828 aa8.75□□□□□ -1.01
LRRC39-201ENST00000342895 CHRM1P11229 460 aaPredicted RBP8.74□□□□□ -1.01
LRRC39-201ENST00000342895 KIF12Q96FN5 646 aa8.74□□□□□ -1.01
LRRC39-201ENST00000342895 CIZ1Q9ULV3 898 aaPredicted RBP8.73□□□□□ -1.01
LRRC39-201ENST00000342895 MAP3K13O43283 966 aa8.69□□□□□ -1.02
LRRC39-201ENST00000342895 PYGBP11216 843 aa8.69□□□□□ -1.02
LRRC39-201ENST00000342895 MS4A3Q96HJ5 214 aa8.68□□□□□ -1.02
LRRC39-201ENST00000342895 GALR2O43603 387 aaPredicted RBP8.68□□□□□ -1.02
LRRC39-201ENST00000342895 PCDHB13Q9Y5F0 798 aa8.67□□□□□ -1.02
LRRC39-201ENST00000342895 PKD2Q13563 968 aa8.64□□□□□ -1.03
LRRC39-201ENST00000342895 ZNF467Q7Z7K2 595 aaPredicted RBP8.64□□□□□ -1.03
LRRC39-201ENST00000342895 IFNL1Q8IU54 200 aa8.63□□□□□ -1.03
LRRC39-201ENST00000342895 TIE1P35590 1138 aa8.61□□□□□ -1.03
LRRC39-201ENST00000342895 POTEB2H3BUK9 544 aa8.6□□□□□ -1.03
LRRC39-201ENST00000342895 ECM2O94769 699 aaPredicted RBP8.6□□□□□ -1.03
LRRC39-201ENST00000342895 DCBLD2Q96PD2 775 aa8.6□□□□□ -1.03
LRRC39-201ENST00000342895 PCDHB8Q9UN66 801 aa8.58□□□□□ -1.04
LRRC39-201ENST00000342895 AMER1Q5JTC6 1135 aaPredicted RBP8.57□□□□□ -1.04
LRRC39-201ENST00000342895 ASTLQ6HA08 431 aaPredicted RBP8.57□□□□□ -1.04
LRRC39-201ENST00000342895 TRPC6Q9Y210 931 aa8.57□□□□□ -1.04
LRRC39-201ENST00000342895 LOC100996750A0A140TA64 210 aa8.56□□□□□ -1.04
LRRC39-201ENST00000342895 KRTAP4-6Q9BYQ5 205 aa8.56□□□□□ -1.04
LRRC39-201ENST00000342895 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
LRRC39-201ENST00000342895 RNF25Q96BH1 459 aaPredicted RBP8.55□□□□□ -1.04
LRRC39-201ENST00000342895 ATMINO43313 823 aaPredicted RBP8.55□□□□□ -1.04
LRRC39-201ENST00000342895 BMP2KQ9NSY1 1161 aaPredicted RBP8.55□□□□□ -1.04
LRRC39-201ENST00000342895 PDAP1Q13442 181 aaKnown RBP8.54□□□□□ -1.04
LRRC39-201ENST00000342895 TAOK2Q9UL54 1235 aa8.53□□□□□ -1.04
LRRC39-201ENST00000342895 TTLL13PA6NNM8 815 aa8.53□□□□□ -1.04
LRRC39-201ENST00000342895 VGFO15240 615 aaPredicted RBP8.52□□□□□ -1.05
LRRC39-201ENST00000342895 PSEN1P49768 467 aa8.51□□□□□ -1.05
LRRC39-201ENST00000342895 RGL2O15211 777 aa8.51□□□□□ -1.05
LRRC39-201ENST00000342895 ATN1P54259 1190 aaPredicted RBP8.51□□□□□ -1.05
LRRC39-201ENST00000342895 TMEM106CQ9BVX2 250 aa8.51□□□□□ -1.05
LRRC39-201ENST00000342895 PELP1Q8IZL8 1130 aaKnown RBP8.47□□□□□ -1.05
LRRC39-201ENST00000342895 RTN4Q9NQC3 1192 aaKnown RBP8.47□□□□□ -1.05
LRRC39-201ENST00000342895 SLC39A7Q92504 469 aa8.47□□□□□ -1.05
LRRC39-201ENST00000342895 TRIM35Q9UPQ4 493 aa8.47□□□□□ -1.05
LRRC39-201ENST00000342895 IER5LQ5T953 404 aa8.46□□□□□ -1.06
LRRC39-201ENST00000342895 C7P10643 843 aa8.45□□□□□ -1.06
LRRC39-201ENST00000342895 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.45□□□□□ -1.06
LRRC39-201ENST00000342895 ZFP91Q96JP5 570 aaPredicted RBP8.45□□□□□ -1.06
LRRC39-201ENST00000342895 GOLGA2Q08379 1002 aa8.4□□□□□ -1.06
LRRC39-201ENST00000342895 METRNQ9UJH8 293 aa8.4□□□□□ -1.06
LRRC39-201ENST00000342895 CABP2Q9NPB3 220 aa8.39□□□□□ -1.07
LRRC39-201ENST00000342895 STK25O00506 426 aa8.38□□□□□ -1.07
LRRC39-201ENST00000342895 MKRN3Q13064 507 aaKnown RBP8.38□□□□□ -1.07
LRRC39-201ENST00000342895 MAMSTRQ6ZN01 415 aa8.38□□□□□ -1.07
LRRC39-201ENST00000342895 BCL11BQ9C0K0 894 aaPredicted RBP8.38□□□□□ -1.07
LRRC39-201ENST00000342895 HS6ST3Q8IZP7 471 aa8.38□□□□□ -1.07
LRRC39-201ENST00000342895 IRX5P78411 483 aaPredicted RBP8.37□□□□□ -1.07
LRRC39-201ENST00000342895 ILDR1Q86SU0 546 aaPredicted RBP8.36□□□□□ -1.07
LRRC39-201ENST00000342895 DNAJC5Q9H3Z4 198 aa8.36□□□□□ -1.07
LRRC39-201ENST00000342895 STK24Q9Y6E0 443 aa8.36□□□□□ -1.07
LRRC39-201ENST00000342895 POTEFA5A3E0 1075 aa8.35□□□□□ -1.07
LRRC39-201ENST00000342895 SOX12O15370 315 aa8.35□□□□□ -1.07
LRRC39-201ENST00000342895 SEC24BO95487 1268 aa8.34□□□□□ -1.07
LRRC39-201ENST00000342895 EFCAB3Q8N7B9 438 aa8.34□□□□□ -1.07
LRRC39-201ENST00000342895 OCEL1Q9H607 264 aa8.34□□□□□ -1.07
LRRC39-201ENST00000342895 COLQQ9Y215 455 aaPredicted RBP8.33□□□□□ -1.08
LRRC39-201ENST00000342895 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
LRRC39-201ENST00000342895 PLCG2P16885 1265 aa8.32□□□□□ -1.08
LRRC39-201ENST00000342895 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.31□□□□□ -1.08
LRRC39-201ENST00000342895 PDCD7Q8N8D1 485 aaKnown RBP8.3□□□□□ -1.08
LRRC39-201ENST00000342895 DCAF8L2P0C7V8 631 aa8.29□□□□□ -1.08
LRRC39-201ENST00000342895 NLRP6P59044 892 aa8.28□□□□□ -1.08
LRRC39-201ENST00000342895 FBXO22Q8NEZ5 403 aa8.26□□□□□ -1.09
LRRC39-201ENST00000342895 MFRPQ9BY79 579 aa8.26□□□□□ -1.09
LRRC39-201ENST00000342895 PHF8Q9UPP1 1060 aa8.26□□□□□ -1.09
LRRC39-201ENST00000342895 L3MBTL3Q96JM7 780 aaPredicted RBP8.25□□□□□ -1.09
LRRC39-201ENST00000342895 POTEJP0CG39 1038 aa8.23□□□□□ -1.09
LRRC39-201ENST00000342895 MS4A4AQ96JQ5 239 aa8.23□□□□□ -1.09
LRRC39-201ENST00000342895 RYDENQ9NUL5 291 aaKnown RBP8.23□□□□□ -1.09
LRRC39-201ENST00000342895 NKX1-1Q15270 411 aaPredicted RBP8.22□□□□□ -1.09
LRRC39-201ENST00000342895 DPY19L2Q6NUT2 758 aa8.21□□□□□ -1.1
LRRC39-201ENST00000342895 BBXQ8WY36 941 aaPredicted RBP8.21□□□□□ -1.1
LRRC39-201ENST00000342895 SCUBE2Q9NQ36 999 aa8.2□□□□□ -1.1
LRRC39-201ENST00000342895 TMEM121BQ9BXQ6 578 aaPredicted RBP8.19□□□□□ -1.1
LRRC39-201ENST00000342895 BOLA1Q9Y3E2 137 aa8.19□□□□□ -1.1
LRRC39-201ENST00000342895 G3V3G9 751 aa8.17□□□□□ -1.1
LRRC39-201ENST00000342895 GTPBP6O43824 516 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms