RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 NEFMP07197 916 aa16.87■□□□□ 0.29
SSX2IP-201ENST00000342203 EIF4G2P78344 907 aaKnown RBP eCLIP16.87■□□□□ 0.29
SSX2IP-201ENST00000342203 EEA1Q15075 1411 aa16.87■□□□□ 0.29
SSX2IP-201ENST00000342203 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.86■□□□□ 0.29
SSX2IP-201ENST00000342203 CCDC88BA6NC98 1476 aa16.83■□□□□ 0.29
SSX2IP-201ENST00000342203 CANXP27824 592 aaKnown RBP16.82■□□□□ 0.28
SSX2IP-201ENST00000342203 RRP7BPQ9NSQ0 103 aa16.82■□□□□ 0.28
SSX2IP-201ENST00000342203 CCER2I3L3R5 266 aa16.8■□□□□ 0.28
SSX2IP-201ENST00000342203 WRNQ14191 1432 aaPredicted RBP eCLIP16.8■□□□□ 0.28
SSX2IP-201ENST00000342203 ABCC8Q09428 1581 aa16.78■□□□□ 0.28
SSX2IP-201ENST00000342203 CEP164Q9UPV0 1460 aa16.77■□□□□ 0.27
SSX2IP-201ENST00000342203 CCNB3Q8WWL7 1395 aa16.76■□□□□ 0.27
SSX2IP-201ENST00000342203 ZNF777Q9ULD5 760 aaPredicted RBP16.76■□□□□ 0.27
SSX2IP-201ENST00000342203 VPS8Q8N3P4 1428 aa16.73■□□□□ 0.27
SSX2IP-201ENST00000342203 DHX57Q6P158 1386 aaKnown RBP16.72■□□□□ 0.27
SSX2IP-201ENST00000342203 KDM2AQ9Y2K7 1162 aa16.71■□□□□ 0.27
SSX2IP-201ENST00000342203 GLIPR1L2Q4G1C9 344 aa16.71■□□□□ 0.27
SSX2IP-201ENST00000342203 PPM1GO15355 546 aaPredicted RBP16.68■□□□□ 0.26
SSX2IP-201ENST00000342203 MTUS2Q5JR59 1369 aa16.67■□□□□ 0.26
SSX2IP-201ENST00000342203 RAB3GAP2Q9H2M9 1393 aa16.67■□□□□ 0.26
SSX2IP-201ENST00000342203 MROH2BQ7Z745 1585 aa16.66■□□□□ 0.26
SSX2IP-201ENST00000342203 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
SSX2IP-201ENST00000342203 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
SSX2IP-201ENST00000342203 DDRGK1Q96HY6 314 aa16.62■□□□□ 0.25
SSX2IP-201ENST00000342203 HSPA5P11021 654 aaKnown RBP16.62■□□□□ 0.25
SSX2IP-201ENST00000342203 RGS3P49796 1198 aa16.61■□□□□ 0.25
SSX2IP-201ENST00000342203 UPF2Q9HAU5 1272 aaKnown RBP16.61■□□□□ 0.25
SSX2IP-201ENST00000342203 FANCIQ9NVI1 1328 aa16.61■□□□□ 0.25
SSX2IP-201ENST00000342203 IPO9Q96P70 1041 aaKnown RBP16.59■□□□□ 0.25
SSX2IP-201ENST00000342203 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.24
SSX2IP-201ENST00000342203 SETD5Q9C0A6 1442 aa16.57■□□□□ 0.24
SSX2IP-201ENST00000342203 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
SSX2IP-201ENST00000342203 ANO8Q9HCE9 1232 aaPredicted RBP16.56■□□□□ 0.24
SSX2IP-201ENST00000342203 ERICH6BQ5W0A0 696 aa16.56■□□□□ 0.24
SSX2IP-201ENST00000342203 TIMELESSQ9UNS1 1208 aa16.55■□□□□ 0.24
SSX2IP-201ENST00000342203 NAP1L5Q96NT1 182 aaPredicted RBP16.53■□□□□ 0.24
SSX2IP-201ENST00000342203 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.53■□□□□ 0.24
SSX2IP-201ENST00000342203 FOXD1Q16676 465 aa16.53■□□□□ 0.24
SSX2IP-201ENST00000342203 MSH5O43196 834 aa16.52■□□□□ 0.24
SSX2IP-201ENST00000342203 WDR43Q15061 677 aaKnown RBP eCLIP16.51■□□□□ 0.23
SSX2IP-201ENST00000342203 FBLN2P98095 1184 aa16.5■□□□□ 0.23
SSX2IP-201ENST00000342203 ANP32BQ92688 251 aaKnown RBP16.5■□□□□ 0.23
SSX2IP-201ENST00000342203 ARID4BQ4LE39 1312 aaPredicted RBP16.46■□□□□ 0.23
SSX2IP-201ENST00000342203 PAK3O75914 559 aaPredicted RBP16.46■□□□□ 0.23
SSX2IP-201ENST00000342203 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
SSX2IP-201ENST00000342203 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
SSX2IP-201ENST00000342203 WIZO95785 1651 aa16.44■□□□□ 0.22
SSX2IP-201ENST00000342203 BECN1Q14457 450 aa16.44■□□□□ 0.22
SSX2IP-201ENST00000342203 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
SSX2IP-201ENST00000342203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.44■□□□□ 0.225e-7■□□□□ 9.3
SSX2IP-201ENST00000342203 RAPGEF2Q9Y4G8 1499 aa16.43■□□□□ 0.22
SSX2IP-201ENST00000342203 IL27Q8NEV9 243 aa16.43■□□□□ 0.22
SSX2IP-201ENST00000342203 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
SSX2IP-201ENST00000342203 KIF27Q86VH2 1401 aa16.43■□□□□ 0.22
SSX2IP-201ENST00000342203 TRIM44Q96DX7 344 aaPredicted RBP16.41■□□□□ 0.22
SSX2IP-201ENST00000342203 NUDCQ9Y266 331 aa16.41■□□□□ 0.22
SSX2IP-201ENST00000342203 BAZ1AQ9NRL2 1556 aaPredicted RBP16.4■□□□□ 0.22
SSX2IP-201ENST00000342203 CC2D1BQ5T0F9 858 aaKnown RBP16.39■□□□□ 0.21
SSX2IP-201ENST00000342203 SPRYD3Q8NCJ5 442 aa16.39■□□□□ 0.21
SSX2IP-201ENST00000342203 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
SSX2IP-201ENST00000342203 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
SSX2IP-201ENST00000342203 SLKQ9H2G2 1235 aaPredicted RBP16.37■□□□□ 0.21
SSX2IP-201ENST00000342203 L3MBTL2Q969R5 705 aa16.36■□□□□ 0.21
SSX2IP-201ENST00000342203 PRKRIP1Q9H875 184 aaPredicted RBP16.36■□□□□ 0.21
SSX2IP-201ENST00000342203 PDE4AP27815 886 aa16.35■□□□□ 0.21
SSX2IP-201ENST00000342203 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
SSX2IP-201ENST00000342203 GZF1Q9H116 711 aaPredicted RBP16.34■□□□□ 0.21
SSX2IP-201ENST00000342203 EXOC6Q8TAG9 804 aa16.33■□□□□ 0.2
SSX2IP-201ENST00000342203 FRAT1Q92837 279 aaPredicted RBP16.31■□□□□ 0.2
SSX2IP-201ENST00000342203 PLIN1O60240 522 aa16.3■□□□□ 0.2
SSX2IP-201ENST00000342203 GSE1Q14687 1217 aa16.29■□□□□ 0.2
SSX2IP-201ENST00000342203 ZBED9Q6R2W3 1325 aa16.29■□□□□ 0.2
SSX2IP-201ENST00000342203 TSPY4P0CV99 314 aa16.28■□□□□ 0.2
SSX2IP-201ENST00000342203 TSPY10P0CW01 314 aa16.28■□□□□ 0.2
SSX2IP-201ENST00000342203 NCLP19338 710 aaKnown RBP16.27■□□□□ 0.2
SSX2IP-201ENST00000342203 BRPF3Q9ULD4 1205 aa16.27■□□□□ 0.19
SSX2IP-201ENST00000342203 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
SSX2IP-201ENST00000342203 USP35Q9P2H5 1018 aa16.25■□□□□ 0.19
SSX2IP-201ENST00000342203 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
SSX2IP-201ENST00000342203 CCDC184Q52MB2 194 aa16.25■□□□□ 0.19
SSX2IP-201ENST00000342203 PNNQ9H307 717 aaKnown RBP16.25■□□□□ 0.19
SSX2IP-201ENST00000342203 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
SSX2IP-201ENST00000342203 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
SSX2IP-201ENST00000342203 KNSTRNQ9Y448 316 aa16.23■□□□□ 0.19
SSX2IP-201ENST00000342203 FHAD1B1AJZ9 1412 aa16.23■□□□□ 0.19
SSX2IP-201ENST00000342203 ARHGAP35Q9NRY4 1499 aa16.22■□□□□ 0.19
SSX2IP-201ENST00000342203 SLC24A1O60721 1099 aa16.21■□□□□ 0.19
SSX2IP-201ENST00000342203 ARID3AQ99856 593 aa16.21■□□□□ 0.18
SSX2IP-201ENST00000342203 L1TD1Q5T7N2 865 aaKnown RBP16.2■□□□□ 0.18
SSX2IP-201ENST00000342203 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
SSX2IP-201ENST00000342203 CUX2O14529 1486 aa16.19■□□□□ 0.18
SSX2IP-201ENST00000342203 SENP3Q9H4L4 574 aaPredicted RBP16.19■□□□□ 0.18
SSX2IP-201ENST00000342203 VSIG10Q8N0Z9 540 aa16.19■□□□□ 0.18
SSX2IP-201ENST00000342203 NACADO15069 1562 aa16.19■□□□□ 0.18
SSX2IP-201ENST00000342203 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
SSX2IP-201ENST00000342203 TPRNQ4KMQ1 711 aa16.18■□□□□ 0.18
SSX2IP-201ENST00000342203 RRP1P56182 461 aaKnown RBP16.18■□□□□ 0.18
SSX2IP-201ENST00000342203 TNNT2P45379 298 aaPredicted RBP16.17■□□□□ 0.18
SSX2IP-201ENST00000342203 NFKBIBQ15653 356 aa16.15■□□□□ 0.18
SSX2IP-201ENST00000342203 GOLGA6L22H0YM25 854 aa16.14■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms