RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 C14orf37Q86TY3 774 aa16.21■□□□□ 0.19
FN1-202ENST00000336916 CFAP53Q96M91 514 aa16.21■□□□□ 0.19
FN1-202ENST00000336916 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.18
FN1-202ENST00000336916 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
FN1-202ENST00000336916 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
FN1-202ENST00000336916 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
FN1-202ENST00000336916 GTF3C3Q9Y5Q9 886 aa16.19■□□□□ 0.18
FN1-202ENST00000336916 KANK1Q14678 1352 aa16.17■□□□□ 0.18
FN1-202ENST00000336916 PLPPR3Q6T4P5 718 aa16.17■□□□□ 0.18
FN1-202ENST00000336916 CASC1Q6TDU7 716 aa16.17■□□□□ 0.18
FN1-202ENST00000336916 HNRNPUQ00839 825 aaKnown RBP eCLIP16.17■□□□□ 0.18
FN1-202ENST00000336916 EIF4G2P78344 907 aaKnown RBP eCLIP16.16■□□□□ 0.18
FN1-202ENST00000336916 WRNQ14191 1432 aaPredicted RBP eCLIP16.15■□□□□ 0.18
FN1-202ENST00000336916 KAT6BQ8WYB5 2073 aa16.15■□□□□ 0.18
FN1-202ENST00000336916 HAP1P54257 671 aaPredicted RBP16.15■□□□□ 0.18
FN1-202ENST00000336916 BECN1Q14457 450 aa16.13■□□□□ 0.17
FN1-202ENST00000336916 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
FN1-202ENST00000336916 GLIPR1L2Q4G1C9 344 aa16.12■□□□□ 0.17
FN1-202ENST00000336916 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
FN1-202ENST00000336916 NCLP19338 710 aaKnown RBP16.09■□□□□ 0.17
FN1-202ENST00000336916 DDRGK1Q96HY6 314 aa16.07■□□□□ 0.16
FN1-202ENST00000336916 GOLGA6L22H0YM25 854 aa16.07■□□□□ 0.16
FN1-202ENST00000336916 FAM9BQ8IZU0 186 aa16.07■□□□□ 0.16
FN1-202ENST00000336916 KNSTRNQ9Y448 316 aa16.07■□□□□ 0.16
FN1-202ENST00000336916 MS4A1P11836 297 aa16.06■□□□□ 0.16
FN1-202ENST00000336916 CFDP1Q9UEE9 299 aaPredicted RBP16.06■□□□□ 0.16
FN1-202ENST00000336916 CHIC2Q9UKJ5 165 aa16.06■□□□□ 0.16
FN1-202ENST00000336916 KDM2AQ9Y2K7 1162 aa16.06■□□□□ 0.16
FN1-202ENST00000336916 ZRSR1Q15695 479 aaKnown RBP16.04■□□□□ 0.16
FN1-202ENST00000336916 MRS2Q9HD23 443 aa16.04■□□□□ 0.16
FN1-202ENST00000336916 A0A0G2JS52 829 aa16.04■□□□□ 0.16
FN1-202ENST00000336916 NUDCQ9Y266 331 aa16.03■□□□□ 0.16
FN1-202ENST00000336916 CFAP44Q96MT7 982 aa16.02■□□□□ 0.15
FN1-202ENST00000336916 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
FN1-202ENST00000336916 CEP162Q5TB80 1403 aa16.01■□□□□ 0.15
FN1-202ENST00000336916 DDX10Q13206 875 aaKnown RBP16.01■□□□□ 0.15
FN1-202ENST00000336916 PDS5BQ9NTI5 1447 aa16■□□□□ 0.15
FN1-202ENST00000336916 KCNH8Q96L42 1107 aa16■□□□□ 0.15
FN1-202ENST00000336916 EIF4G1Q04637 1599 aaKnown RBP15.99■□□□□ 0.15
FN1-202ENST00000336916 CHMP4AQ9BY43 222 aa15.99■□□□□ 0.15
FN1-202ENST00000336916 FKBP8Q14318 412 aa15.97■□□□□ 0.15
FN1-202ENST00000336916 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
FN1-202ENST00000336916 MAPK8IP3Q9UPT6 1336 aa15.96■□□□□ 0.15
FN1-202ENST00000336916 CCNB3Q8WWL7 1395 aa15.95■□□□□ 0.14
FN1-202ENST00000336916 NPHP1O15259 732 aa15.94■□□□□ 0.14
FN1-202ENST00000336916 MYO15BQ96JP2 1530 aa15.93■□□□□ 0.14
FN1-202ENST00000336916 POGKQ9P215 609 aa15.93■□□□□ 0.14
FN1-202ENST00000336916 TNIKQ9UKE5 1360 aa15.93■□□□□ 0.14
FN1-202ENST00000336916 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
FN1-202ENST00000336916 ABCC8Q09428 1581 aa15.89■□□□□ 0.13
FN1-202ENST00000336916 RRP7BPQ9NSQ0 103 aa15.89■□□□□ 0.13
FN1-202ENST00000336916 GOLGA2Q08379 1002 aa15.88■□□□□ 0.13
FN1-202ENST00000336916 FMN1Q68DA7 1419 aa15.88■□□□□ 0.13
FN1-202ENST00000336916 GOLGA6L6A8MZA4 724 aa15.88■□□□□ 0.13
FN1-202ENST00000336916 ZBTB7CA1YPR0 619 aa15.87■□□□□ 0.13
FN1-202ENST00000336916 TRIM44Q96DX7 344 aaPredicted RBP15.87■□□□□ 0.13
FN1-202ENST00000336916 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
FN1-202ENST00000336916 SALL2Q9Y467 1007 aaPredicted RBP15.86■□□□□ 0.13
FN1-202ENST00000336916 NRDCO43847 1150 aa15.86■□□□□ 0.13
FN1-202ENST00000336916 CARD11Q9BXL7 1154 aa15.85■□□□□ 0.13
FN1-202ENST00000336916 CALD1Q05682 793 aaKnown RBP15.83■□□□□ 0.13
FN1-202ENST00000336916 TIMELESSQ9UNS1 1208 aa15.83■□□□□ 0.13
FN1-202ENST00000336916 EIF3AQ14152 1382 aaKnown RBP15.83■□□□□ 0.12
FN1-202ENST00000336916 CUX2O14529 1486 aa15.82■□□□□ 0.12
FN1-202ENST00000336916 TMF1P82094 1093 aa15.81■□□□□ 0.12
FN1-202ENST00000336916 TOP2AP11388 1531 aaKnown RBP15.8■□□□□ 0.12
FN1-202ENST00000336916 ARXQ96QS3 562 aa15.79■□□□□ 0.12
FN1-202ENST00000336916 CARMIL1Q5VZK9 1371 aa15.79■□□□□ 0.12
FN1-202ENST00000336916 RGL3Q3MIN7 710 aa15.78■□□□□ 0.12
FN1-202ENST00000336916 L1TD1Q5T7N2 865 aaKnown RBP15.78■□□□□ 0.12
FN1-202ENST00000336916 HDAC5Q9UQL6 1122 aa15.78■□□□□ 0.12
FN1-202ENST00000336916 CCDC18Q5T9S5 1454 aa15.78■□□□□ 0.12
FN1-202ENST00000336916 PPM1GO15355 546 aaPredicted RBP15.77■□□□□ 0.12
FN1-202ENST00000336916 WIZO95785 1651 aa15.76■□□□□ 0.11
FN1-202ENST00000336916 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
FN1-202ENST00000336916 TMX4Q9H1E5 349 aaPredicted RBP15.76■□□□□ 0.11
FN1-202ENST00000336916 MCCP23508 829 aa15.75■□□□□ 0.11
FN1-202ENST00000336916 SMARCA4P51532 1647 aa15.75■□□□□ 0.11
FN1-202ENST00000336916 OS9Q13438 667 aaPredicted RBP15.74■□□□□ 0.11
FN1-202ENST00000336916 TNNT2P45379 298 aaPredicted RBP15.74■□□□□ 0.11
FN1-202ENST00000336916 FGD1P98174 961 aa15.74■□□□□ 0.11
FN1-202ENST00000336916 TRHP20396 242 aaPredicted RBP15.73■□□□□ 0.11
FN1-202ENST00000336916 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
FN1-202ENST00000336916 RTF1Q92541 710 aaKnown RBP15.71■□□□□ 0.11
FN1-202ENST00000336916 KCNJ4P48050 445 aa15.7■□□□□ 0.1
FN1-202ENST00000336916 HDGFL2Q7Z4V5 671 aaPredicted RBP15.69■□□□□ 0.1
FN1-202ENST00000336916 UACAQ9BZF9 1416 aa15.69■□□□□ 0.1
FN1-202ENST00000336916 PTMSP20962 102 aa15.68■□□□□ 0.1
FN1-202ENST00000336916 IPO8O15397 1037 aaKnown RBP15.68■□□□□ 0.1
FN1-202ENST00000336916 PTMAP06454 111 aaKnown RBP15.67■□□□□ 0.1
FN1-202ENST00000336916 SOGA1O94964 1423 aa15.66■□□□□ 0.1
FN1-202ENST00000336916 ANKRD30AQ9BXX3 1397 aa15.66■□□□□ 0.1
FN1-202ENST00000336916 SRPK2P78362 688 aaKnown RBP15.65■□□□□ 0.1
FN1-202ENST00000336916 LAS1LQ9Y4W2 734 aaKnown RBP15.65■□□□□ 0.1
FN1-202ENST00000336916 EID1Q9Y6B2 187 aa15.64■□□□□ 0.09
FN1-202ENST00000336916 CCDC34Q96HJ3 373 aa15.63■□□□□ 0.09
FN1-202ENST00000336916 SPAG9O60271 1321 aaKnown RBP15.63■□□□□ 0.09
FN1-202ENST00000336916 SETD5Q9C0A6 1442 aa15.63■□□□□ 0.09
FN1-202ENST00000336916 EFCAB2Q5VUJ9 269 aa15.63■□□□□ 0.09
FN1-202ENST00000336916 VPS8Q8N3P4 1428 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms