RNA–Protein interactions for RNA: ENST00000329629.8

FNDC1-202, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 1 (best)

Gene FNDC1, Length 6,034 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-202ENST00000329629 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
FNDC1-202ENST00000329629 CDK11BP21127 795 aaKnown RBP18.73■□□□□ 0.59
FNDC1-202ENST00000329629 MIER1Q8N108 512 aa18.73■□□□□ 0.59
FNDC1-202ENST00000329629 DDRGK1Q96HY6 314 aa18.71■□□□□ 0.59
FNDC1-202ENST00000329629 MYH16Q9H6N6 1097 aa18.69■□□□□ 0.58
FNDC1-202ENST00000329629 HIRIP3Q9BW71 556 aaPredicted RBP18.69■□□□□ 0.58
FNDC1-202ENST00000329629 BECN1Q14457 450 aa18.68■□□□□ 0.58
FNDC1-202ENST00000329629 NCLP19338 710 aaKnown RBP18.67■□□□□ 0.58
FNDC1-202ENST00000329629 RTN4Q9NQC3 1192 aaKnown RBP18.66■□□□□ 0.58
FNDC1-202ENST00000329629 PLEKHD1A6NEE1 506 aa18.65■□□□□ 0.58
FNDC1-202ENST00000329629 TNNT2P45379 298 aaPredicted RBP18.65■□□□□ 0.58
FNDC1-202ENST00000329629 KDM2AQ9Y2K7 1162 aa18.64■□□□□ 0.58
FNDC1-202ENST00000329629 TPRNQ4KMQ1 711 aa18.64■□□□□ 0.57
FNDC1-202ENST00000329629 ANP32EQ9BTT0 268 aa18.64■□□□□ 0.57
FNDC1-202ENST00000329629 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
FNDC1-202ENST00000329629 ARID4BQ4LE39 1312 aaPredicted RBP18.61■□□□□ 0.57
FNDC1-202ENST00000329629 GOLGA6L22H0YM25 854 aa18.6■□□□□ 0.57
FNDC1-202ENST00000329629 RSF1Q96T23 1441 aaPredicted RBP18.6■□□□□ 0.57
FNDC1-202ENST00000329629 DNTTIP2Q5QJE6 756 aaKnown RBP18.6■□□□□ 0.57
FNDC1-202ENST00000329629 NAP1L5Q96NT1 182 aaPredicted RBP18.59■□□□□ 0.57
FNDC1-202ENST00000329629 SENP3-EIF4A1A0A087X0R7 540 aa18.58■□□□□ 0.57
FNDC1-202ENST00000329629 CLIP1P30622 1438 aa18.58■□□□□ 0.56
FNDC1-202ENST00000329629 PPP1R15AO75807 674 aaPredicted RBP18.58■□□□□ 0.56
FNDC1-202ENST00000329629 WRNQ14191 1432 aaPredicted RBP eCLIP18.55■□□□□ 0.56
FNDC1-202ENST00000329629 LAS1LQ9Y4W2 734 aaKnown RBP18.54■□□□□ 0.56
FNDC1-202ENST00000329629 SENP3Q9H4L4 574 aaPredicted RBP18.53■□□□□ 0.56
FNDC1-202ENST00000329629 DCAF1Q9Y4B6 1507 aa18.53■□□□□ 0.56
FNDC1-202ENST00000329629 KIF27Q86VH2 1401 aa18.52■□□□□ 0.55
FNDC1-202ENST00000329629 A0A0G2JS52 829 aa18.51■□□□□ 0.55
FNDC1-202ENST00000329629 C14orf37Q86TY3 774 aa18.51■□□□□ 0.55
FNDC1-202ENST00000329629 RRP7BPQ9NSQ0 103 aa18.5■□□□□ 0.55
FNDC1-202ENST00000329629 ZBTB7CA1YPR0 619 aa18.5■□□□□ 0.55
FNDC1-202ENST00000329629 GOLGA3Q08378 1498 aa18.49■□□□□ 0.55
FNDC1-202ENST00000329629 EEA1Q15075 1411 aa18.49■□□□□ 0.55
FNDC1-202ENST00000329629 ZRSR1Q15695 479 aaKnown RBP18.48■□□□□ 0.55
FNDC1-202ENST00000329629 ERICH6BQ5W0A0 696 aa18.48■□□□□ 0.55
FNDC1-202ENST00000329629 PLEKHG5O94827 1062 aa18.47■□□□□ 0.55
FNDC1-202ENST00000329629 BAZ1AQ9NRL2 1556 aaPredicted RBP18.47■□□□□ 0.55
FNDC1-202ENST00000329629 SUPT16HQ9Y5B9 1047 aaKnown RBP18.46■□□□□ 0.55
FNDC1-202ENST00000329629 PPM1GO15355 546 aaPredicted RBP18.45■□□□□ 0.54
FNDC1-202ENST00000329629 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
FNDC1-202ENST00000329629 TULP1O00294 542 aaPredicted RBP18.43■□□□□ 0.54
FNDC1-202ENST00000329629 EIF4G2P78344 907 aaKnown RBP eCLIP18.43■□□□□ 0.54
FNDC1-202ENST00000329629 TRHP20396 242 aaPredicted RBP18.43■□□□□ 0.54
FNDC1-202ENST00000329629 PLCB2Q00722 1185 aa18.43■□□□□ 0.54
FNDC1-202ENST00000329629 CASC1Q6TDU7 716 aa18.4■□□□□ 0.54
FNDC1-202ENST00000329629 NOP58Q9Y2X3 529 aaKnown RBP18.39■□□□□ 0.54
FNDC1-202ENST00000329629 TAOK2Q9UL54 1235 aa18.37■□□□□ 0.53
FNDC1-202ENST00000329629 AMER1Q5JTC6 1135 aaPredicted RBP18.36■□□□□ 0.53
FNDC1-202ENST00000329629 FTSJ3Q8IY81 847 aaKnown RBP18.35■□□□□ 0.53
FNDC1-202ENST00000329629 RGS3P49796 1198 aa18.35■□□□□ 0.53
FNDC1-202ENST00000329629 HAP1P54257 671 aaPredicted RBP18.35■□□□□ 0.53
FNDC1-202ENST00000329629 EIF4G1Q04637 1599 aaKnown RBP18.34■□□□□ 0.53
FNDC1-202ENST00000329629 RGL3Q3MIN7 710 aa18.33■□□□□ 0.53
FNDC1-202ENST00000329629 CEP162Q5TB80 1403 aa18.33■□□□□ 0.52
FNDC1-202ENST00000329629 CEP164Q9UPV0 1460 aa18.31■□□□□ 0.52
FNDC1-202ENST00000329629 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
FNDC1-202ENST00000329629 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
FNDC1-202ENST00000329629 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
FNDC1-202ENST00000329629 PPP4R2Q9NY27 417 aa18.28■□□□□ 0.52
FNDC1-202ENST00000329629 CUX2O14529 1486 aa18.26■□□□□ 0.51
FNDC1-202ENST00000329629 GOLGA6L6A8MZA4 724 aa18.26■□□□□ 0.51
FNDC1-202ENST00000329629 CFAP53Q96M91 514 aa18.25■□□□□ 0.51
FNDC1-202ENST00000329629 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
FNDC1-202ENST00000329629 FRAT1Q92837 279 aaPredicted RBP18.24■□□□□ 0.51
FNDC1-202ENST00000329629 DEKP35659 375 aaKnown RBP18.24■□□□□ 0.51
FNDC1-202ENST00000329629 B4GALNT3Q6L9W6 998 aa18.22■□□□□ 0.51
FNDC1-202ENST00000329629 CARMIL1Q5VZK9 1371 aa18.22■□□□□ 0.51
FNDC1-202ENST00000329629 KNSTRNQ9Y448 316 aa18.22■□□□□ 0.51
FNDC1-202ENST00000329629 CCNB3Q8WWL7 1395 aa18.21■□□□□ 0.51
FNDC1-202ENST00000329629 SPRYD3Q8NCJ5 442 aa18.21■□□□□ 0.51
FNDC1-202ENST00000329629 SMARCA2P51531 1590 aa18.21■□□□□ 0.5
FNDC1-202ENST00000329629 TNIKQ9UKE5 1360 aa18.2■□□□□ 0.5
FNDC1-202ENST00000329629 MSNP26038 577 aaKnown RBP18.19■□□□□ 0.5
FNDC1-202ENST00000329629 MLECQ14165 292 aa18.19■□□□□ 0.5
FNDC1-202ENST00000329629 NAP1L2Q9ULW6 460 aaPredicted RBP18.18■□□□□ 0.5
FNDC1-202ENST00000329629 CHAF1AQ13111 956 aaPredicted RBP18.18■□□□□ 0.5
FNDC1-202ENST00000329629 POGKQ9P215 609 aa18.17■□□□□ 0.5
FNDC1-202ENST00000329629 CDCA8Q53HL2 280 aa18.16■□□□□ 0.5
FNDC1-202ENST00000329629 MAPK8IP3Q9UPT6 1336 aa18.15■□□□□ 0.5
FNDC1-202ENST00000329629 FGD1P98174 961 aa18.15■□□□□ 0.5
FNDC1-202ENST00000329629 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
FNDC1-202ENST00000329629 HSCBQ8IWL3 235 aa18.14■□□□□ 0.49
FNDC1-202ENST00000329629 KANK1Q14678 1352 aa18.14■□□□□ 0.49
FNDC1-202ENST00000329629 FHAD1B1AJZ9 1412 aa18.14■□□□□ 0.49
FNDC1-202ENST00000329629 L1TD1Q5T7N2 865 aaKnown RBP18.13■□□□□ 0.49
FNDC1-202ENST00000329629 ARID3AQ99856 593 aa18.13■□□□□ 0.49
FNDC1-202ENST00000329629 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
FNDC1-202ENST00000329629 OS9Q13438 667 aaPredicted RBP18.13■□□□□ 0.49
FNDC1-202ENST00000329629 NRDCO43847 1150 aa18.13■□□□□ 0.49
FNDC1-202ENST00000329629 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
FNDC1-202ENST00000329629 CARMIL2Q6F5E8 1435 aa18.12■□□□□ 0.49
FNDC1-202ENST00000329629 KCNJ4P48050 445 aa18.11■□□□□ 0.49
FNDC1-202ENST00000329629 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
FNDC1-202ENST00000329629 GOLGA6L4A6NEF3 574 aa18.1■□□□□ 0.49
FNDC1-202ENST00000329629 SOGA1O94964 1423 aa18.1■□□□□ 0.49
FNDC1-202ENST00000329629 HDGFP51858 240 aaKnown RBP18.09■□□□□ 0.49
FNDC1-202ENST00000329629 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.08■□□□□ 0.48
FNDC1-202ENST00000329629 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
FNDC1-202ENST00000329629 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms