RNA–Protein interactions for RNA: ENST00000329468.3

NPAP1-201, Transcript of nuclear pore associated protein 1, humanhuman

APPRIS P1 BASIC

Gene NPAP1, Length 7,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1-201ENST00000329468 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
NPAP1-201ENST00000329468 TAOK2Q9UL54 1235 aa16.88■□□□□ 0.29
NPAP1-201ENST00000329468 LMOD2Q6P5Q4 547 aa16.88■□□□□ 0.29
NPAP1-201ENST00000329468 MTUS2Q5JR59 1369 aa16.88■□□□□ 0.29
NPAP1-201ENST00000329468 UPF2Q9HAU5 1272 aaKnown RBP16.86■□□□□ 0.29
NPAP1-201ENST00000329468 TRHP20396 242 aaPredicted RBP16.84■□□□□ 0.29
NPAP1-201ENST00000329468 ANP32BQ92688 251 aaKnown RBP16.82■□□□□ 0.28
NPAP1-201ENST00000329468 ACIN1Q9UKV3 1341 aaKnown RBP16.82■□□□□ 0.28
NPAP1-201ENST00000329468 EIF5BO60841 1220 aaKnown RBP16.81■□□□□ 0.28
NPAP1-201ENST00000329468 LAS1LQ9Y4W2 734 aaKnown RBP16.8■□□□□ 0.28
NPAP1-201ENST00000329468 CCDC136Q96JN2 1154 aa16.8■□□□□ 0.28
NPAP1-201ENST00000329468 MRS2Q9HD23 443 aa16.79■□□□□ 0.28
NPAP1-201ENST00000329468 ERCC6Q03468 1493 aa16.79■□□□□ 0.28
NPAP1-201ENST00000329468 TNNT2P45379 298 aaPredicted RBP16.77■□□□□ 0.28
NPAP1-201ENST00000329468 MLECQ14165 292 aa16.76■□□□□ 0.27
NPAP1-201ENST00000329468 NPHP1O15259 732 aa16.74■□□□□ 0.27
NPAP1-201ENST00000329468 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.74■□□□□ 0.27
NPAP1-201ENST00000329468 MYH16Q9H6N6 1097 aa16.73■□□□□ 0.27
NPAP1-201ENST00000329468 SOX12O15370 315 aa16.72■□□□□ 0.27
NPAP1-201ENST00000329468 NEUROD2Q15784 382 aa16.72■□□□□ 0.27
NPAP1-201ENST00000329468 ZCCHC6Q5VYS8 1495 aaKnown RBP16.7■□□□□ 0.26
NPAP1-201ENST00000329468 RB1CC1Q8TDY2 1594 aa16.68■□□□□ 0.26
NPAP1-201ENST00000329468 EIF4G1Q04637 1599 aaKnown RBP16.67■□□□□ 0.26
NPAP1-201ENST00000329468 PLEKHD1A6NEE1 506 aa16.67■□□□□ 0.26
NPAP1-201ENST00000329468 CCDC180Q9P1Z9 1646 aa16.64■□□□□ 0.25
NPAP1-201ENST00000329468 MIER1Q8N108 512 aa16.62■□□□□ 0.25
NPAP1-201ENST00000329468 SAFB2Q14151 953 aaKnown RBP eCLIP16.61■□□□□ 0.25
NPAP1-201ENST00000329468 CDK11BP21127 795 aaKnown RBP16.61■□□□□ 0.25
NPAP1-201ENST00000329468 CLIP1P30622 1438 aa16.61■□□□□ 0.25
NPAP1-201ENST00000329468 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
NPAP1-201ENST00000329468 POGKQ9P215 609 aa16.6■□□□□ 0.25
NPAP1-201ENST00000329468 EIF4G2P78344 907 aaKnown RBP eCLIP16.59■□□□□ 0.25
NPAP1-201ENST00000329468 CFDP1Q9UEE9 299 aaPredicted RBP16.58■□□□□ 0.25
NPAP1-201ENST00000329468 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
NPAP1-201ENST00000329468 NCLP19338 710 aaKnown RBP16.55■□□□□ 0.24
NPAP1-201ENST00000329468 NCBP3Q53F19 620 aaKnown RBP16.55■□□□□ 0.24
NPAP1-201ENST00000329468 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
NPAP1-201ENST00000329468 FTSJ3Q8IY81 847 aaKnown RBP16.54■□□□□ 0.24
NPAP1-201ENST00000329468 CARD11Q9BXL7 1154 aa16.53■□□□□ 0.24
NPAP1-201ENST00000329468 MYO15BQ96JP2 1530 aa16.52■□□□□ 0.24
NPAP1-201ENST00000329468 U2SURPO15042 1029 aaKnown RBP16.51■□□□□ 0.23
NPAP1-201ENST00000329468 NAP1L2Q9ULW6 460 aaPredicted RBP16.49■□□□□ 0.23
NPAP1-201ENST00000329468 FRAT1Q92837 279 aaPredicted RBP16.49■□□□□ 0.23
NPAP1-201ENST00000329468 STK26Q9P289 416 aa16.49■□□□□ 0.23
NPAP1-201ENST00000329468 CFAP53Q96M91 514 aa16.48■□□□□ 0.23
NPAP1-201ENST00000329468 SIN3AQ96ST3 1273 aa16.47■□□□□ 0.23
NPAP1-201ENST00000329468 RSF1Q96T23 1441 aaPredicted RBP16.47■□□□□ 0.23
NPAP1-201ENST00000329468 OS9Q13438 667 aaPredicted RBP16.46■□□□□ 0.23
NPAP1-201ENST00000329468 AMER1Q5JTC6 1135 aaPredicted RBP16.44■□□□□ 0.22
NPAP1-201ENST00000329468 PAK3O75914 559 aaPredicted RBP16.44■□□□□ 0.22
NPAP1-201ENST00000329468 MAPK8IP3Q9UPT6 1336 aa16.44■□□□□ 0.22
NPAP1-201ENST00000329468 CEP162Q5TB80 1403 aa16.43■□□□□ 0.22
NPAP1-201ENST00000329468 DCAF1Q9Y4B6 1507 aa16.43■□□□□ 0.22
NPAP1-201ENST00000329468 GOLGA3Q08378 1498 aa16.42■□□□□ 0.22
NPAP1-201ENST00000329468 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
NPAP1-201ENST00000329468 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
NPAP1-201ENST00000329468 SRPK2P78362 688 aaKnown RBP16.41■□□□□ 0.22
NPAP1-201ENST00000329468 ZNF330Q9Y3S2 320 aaPredicted RBP16.4■□□□□ 0.22
NPAP1-201ENST00000329468 FOXD1Q16676 465 aa16.39■□□□□ 0.21
NPAP1-201ENST00000329468 GGT6Q6P531 493 aa16.39■□□□□ 0.21
NPAP1-201ENST00000329468 DCAF11Q8TEB1 546 aa16.39■□□□□ 0.21
NPAP1-201ENST00000329468 CASC1Q6TDU7 716 aa16.39■□□□□ 0.21
NPAP1-201ENST00000329468 RGS3P49796 1198 aa16.39■□□□□ 0.21
NPAP1-201ENST00000329468 ISY1Q9ULR0 285 aaKnown RBP16.38■□□□□ 0.21
NPAP1-201ENST00000329468 NUTM2DQ5VT03 806 aaPredicted RBP16.37■□□□□ 0.21
NPAP1-201ENST00000329468 CLSTN1O94985 981 aa16.36■□□□□ 0.21
NPAP1-201ENST00000329468 PLCB2Q00722 1185 aa16.35■□□□□ 0.21
NPAP1-201ENST00000329468 WRNQ14191 1432 aaPredicted RBP eCLIP16.35■□□□□ 0.21
NPAP1-201ENST00000329468 ZRSR1Q15695 479 aaKnown RBP16.35■□□□□ 0.21
NPAP1-201ENST00000329468 SPRYD3Q8NCJ5 442 aa16.34■□□□□ 0.21
NPAP1-201ENST00000329468 CCDC9Q9Y3X0 531 aaKnown RBP16.34■□□□□ 0.21
NPAP1-201ENST00000329468 BECN1Q14457 450 aa16.34■□□□□ 0.21
NPAP1-201ENST00000329468 APBB1O00213 710 aa16.33■□□□□ 0.2
NPAP1-201ENST00000329468 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
NPAP1-201ENST00000329468 FGD1P98174 961 aa16.33■□□□□ 0.2
NPAP1-201ENST00000329468 KCNJ4P48050 445 aa16.31■□□□□ 0.2
NPAP1-201ENST00000329468 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.31■□□□□ 0.2
NPAP1-201ENST00000329468 CDCA8Q53HL2 280 aa16.3■□□□□ 0.2
NPAP1-201ENST00000329468 NUDCQ9Y266 331 aa16.3■□□□□ 0.2
NPAP1-201ENST00000329468 PTMAP06454 111 aaKnown RBP16.3■□□□□ 0.2
NPAP1-201ENST00000329468 TRIM44Q96DX7 344 aaPredicted RBP16.29■□□□□ 0.2
NPAP1-201ENST00000329468 CCNB3Q8WWL7 1395 aa16.29■□□□□ 0.2
NPAP1-201ENST00000329468 NUTM2FA1L443 756 aa16.27■□□□□ 0.19
NPAP1-201ENST00000329468 DNTTIP2Q5QJE6 756 aaKnown RBP16.26■□□□□ 0.19
NPAP1-201ENST00000329468 KANK1Q14678 1352 aa16.26■□□□□ 0.19
NPAP1-201ENST00000329468 CSB-PGBD3P0DP91 1061 aa16.25■□□□□ 0.19
NPAP1-201ENST00000329468 ABCC8Q09428 1581 aa16.25■□□□□ 0.19
NPAP1-201ENST00000329468 DDRGK1Q96HY6 314 aa16.24■□□□□ 0.19
NPAP1-201ENST00000329468 NACADO15069 1562 aa16.24■□□□□ 0.19
NPAP1-201ENST00000329468 GOLGA6L22H0YM25 854 aa16.23■□□□□ 0.19
NPAP1-201ENST00000329468 HSP90AB1P08238 724 aaKnown RBP16.23■□□□□ 0.19
NPAP1-201ENST00000329468 CUX2O14529 1486 aa16.22■□□□□ 0.19
NPAP1-201ENST00000329468 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
NPAP1-201ENST00000329468 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
NPAP1-201ENST00000329468 B4GALNT3Q6L9W6 998 aa16.2■□□□□ 0.18
NPAP1-201ENST00000329468 RTF1Q92541 710 aaKnown RBP16.2■□□□□ 0.18
NPAP1-201ENST00000329468 TMF1P82094 1093 aa16.19■□□□□ 0.18
NPAP1-201ENST00000329468 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
NPAP1-201ENST00000329468 CHMP3Q9Y3E7 222 aa16.17■□□□□ 0.18
NPAP1-201ENST00000329468 CECR2Q9BXF3 1484 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms