RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 PAK3O75914 559 aaPredicted RBP10.53□□□□□ -0.72
ZNF404-201ENST00000324394 CREBZFQ9NS37 354 aa10.53□□□□□ -0.72
ZNF404-201ENST00000324394 STAG3Q9UJ98 1225 aa10.49□□□□□ -0.73
ZNF404-201ENST00000324394 MAMSTRQ6ZN01 415 aa10.46□□□□□ -0.74
ZNF404-201ENST00000324394 PHF12Q96QT6 1004 aa10.46□□□□□ -0.74
ZNF404-201ENST00000324394 PELP1Q8IZL8 1130 aaKnown RBP10.45□□□□□ -0.74
ZNF404-201ENST00000324394 METRNQ9UJH8 293 aa10.42□□□□□ -0.74
ZNF404-201ENST00000324394 SLC39A7Q92504 469 aa10.42□□□□□ -0.74
ZNF404-201ENST00000324394 C7P10643 843 aa10.41□□□□□ -0.74
ZNF404-201ENST00000324394 KLHL34Q8N239 644 aa10.4□□□□□ -0.74
ZNF404-201ENST00000324394 PKD2Q13563 968 aa10.4□□□□□ -0.75
ZNF404-201ENST00000324394 ASTLQ6HA08 431 aaPredicted RBP10.4□□□□□ -0.75
ZNF404-201ENST00000324394 NPM1P06748 294 aaKnown RBP eCLIP10.38□□□□□ -0.75
ZNF404-201ENST00000324394 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
ZNF404-201ENST00000324394 POTEJP0CG39 1038 aa10.36□□□□□ -0.75
ZNF404-201ENST00000324394 LCE2DQ5TA82 110 aaPredicted RBP10.36□□□□□ -0.75
ZNF404-201ENST00000324394 MIER1Q8N108 512 aa10.35□□□□□ -0.75
ZNF404-201ENST00000324394 SPOCK2Q92563 424 aa10.35□□□□□ -0.75
ZNF404-201ENST00000324394 ATMINO43313 823 aaPredicted RBP10.35□□□□□ -0.75
ZNF404-201ENST00000324394 FAM163AQ96GL9 167 aaPredicted RBP10.35□□□□□ -0.75
ZNF404-201ENST00000324394 SCUBE2Q9NQ36 999 aa10.35□□□□□ -0.75
ZNF404-201ENST00000324394 MS4A3Q96HJ5 214 aa10.32□□□□□ -0.76
ZNF404-201ENST00000324394 DCAF8L2P0C7V8 631 aa10.3□□□□□ -0.76
ZNF404-201ENST00000324394 MNX1P50219 401 aaPredicted RBP10.26□□□□□ -0.77
ZNF404-201ENST00000324394 ECM2O94769 699 aaPredicted RBP10.23□□□□□ -0.77
ZNF404-201ENST00000324394 PLEKHG5O94827 1062 aa10.21□□□□□ -0.78
ZNF404-201ENST00000324394 PLCB2Q00722 1185 aa10.21□□□□□ -0.78
ZNF404-201ENST00000324394 ATN1P54259 1190 aaPredicted RBP10.2□□□□□ -0.78
ZNF404-201ENST00000324394 CDAN1Q8IWY9 1227 aa10.19□□□□□ -0.78
ZNF404-201ENST00000324394 ZBTB47Q9UFB7 747 aaPredicted RBP10.18□□□□□ -0.78
ZNF404-201ENST00000324394 RGL2O15211 777 aa10.15□□□□□ -0.78
ZNF404-201ENST00000324394 CIZ1Q9ULV3 898 aaPredicted RBP10.15□□□□□ -0.78
ZNF404-201ENST00000324394 POTEFA5A3E0 1075 aa10.13□□□□□ -0.79
ZNF404-201ENST00000324394 TSPYL2Q9H2G4 693 aaPredicted RBP10.1□□□□□ -0.79
ZNF404-201ENST00000324394 BMP2KQ9NSY1 1161 aaPredicted RBP10.1□□□□□ -0.79
ZNF404-201ENST00000324394 CCDC61Q9Y6R9 512 aa10.1□□□□□ -0.79
ZNF404-201ENST00000324394 TIE1P35590 1138 aa10.07□□□□□ -0.8
ZNF404-201ENST00000324394 KIF12Q96FN5 646 aa10.07□□□□□ -0.8
ZNF404-201ENST00000324394 HAP1P54257 671 aaPredicted RBP10.06□□□□□ -0.8
ZNF404-201ENST00000324394 NUBP1P53384 320 aa10.05□□□□□ -0.8
ZNF404-201ENST00000324394 SEC24BO95487 1268 aa10.05□□□□□ -0.8
ZNF404-201ENST00000324394 BBXQ8WY36 941 aaPredicted RBP10.04□□□□□ -0.8
ZNF404-201ENST00000324394 TRPC6Q9Y210 931 aa10.01□□□□□ -0.81
ZNF404-201ENST00000324394 GSE1Q14687 1217 aa10□□□□□ -0.81
ZNF404-201ENST00000324394 ZBTB4Q9P1Z0 1013 aaPredicted RBP10□□□□□ -0.81
ZNF404-201ENST00000324394 COLQQ9Y215 455 aaPredicted RBP10□□□□□ -0.81
ZNF404-201ENST00000324394 TRIM41Q8WV44 630 aa10□□□□□ -0.81
ZNF404-201ENST00000324394 ST18O60284 1047 aa9.99□□□□□ -0.81
ZNF404-201ENST00000324394 DCAF8Q5TAQ9 597 aa9.99□□□□□ -0.81
ZNF404-201ENST00000324394 MMRN1Q13201 1228 aa9.98□□□□□ -0.81
ZNF404-201ENST00000324394 IER5LQ5T953 404 aa9.98□□□□□ -0.81
ZNF404-201ENST00000324394 CHGAP10645 457 aaKnown RBP9.98□□□□□ -0.81
ZNF404-201ENST00000324394 RNF25Q96BH1 459 aaPredicted RBP9.98□□□□□ -0.81
ZNF404-201ENST00000324394 TTLL13PA6NNM8 815 aa9.97□□□□□ -0.81
ZNF404-201ENST00000324394 MAP3K13O43283 966 aa9.97□□□□□ -0.81
ZNF404-201ENST00000324394 PAXIP1Q6ZW49 1069 aaPredicted RBP9.97□□□□□ -0.81
ZNF404-201ENST00000324394 SLAIN1Q8ND83 568 aa9.96□□□□□ -0.81
ZNF404-201ENST00000324394 CFAP44Q96MT7 982 aa9.96□□□□□ -0.82
ZNF404-201ENST00000324394 SPNS2Q8IVW8 549 aa9.94□□□□□ -0.82
ZNF404-201ENST00000324394 RASEFQ8IZ41 740 aa9.93□□□□□ -0.82
ZNF404-201ENST00000324394 FAM212AQ96EL1 285 aa9.93□□□□□ -0.82
ZNF404-201ENST00000324394 TMEM121BQ9BXQ6 578 aaPredicted RBP9.91□□□□□ -0.82
ZNF404-201ENST00000324394 TRIM35Q9UPQ4 493 aa9.91□□□□□ -0.82
ZNF404-201ENST00000324394 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
ZNF404-201ENST00000324394 SPRYD3Q8NCJ5 442 aa9.89□□□□□ -0.83
ZNF404-201ENST00000324394 HS6ST3Q8IZP7 471 aa9.88□□□□□ -0.83
ZNF404-201ENST00000324394 SGIP1Q9BQI5 828 aa9.88□□□□□ -0.83
ZNF404-201ENST00000324394 RIOK3O14730 519 aaKnown RBP9.87□□□□□ -0.83
ZNF404-201ENST00000324394 KDM2AQ9Y2K7 1162 aa9.85□□□□□ -0.83
ZNF404-201ENST00000324394 SNPHO15079 494 aa9.84□□□□□ -0.83
ZNF404-201ENST00000324394 CHRM1P11229 460 aaPredicted RBP9.84□□□□□ -0.83
ZNF404-201ENST00000324394 PYGBP11216 843 aa9.83□□□□□ -0.84
ZNF404-201ENST00000324394 PLCG2P16885 1265 aa9.82□□□□□ -0.84
ZNF404-201ENST00000324394 TSHZ2Q9NRE2 1034 aa9.82□□□□□ -0.84
ZNF404-201ENST00000324394 PCDHB13Q9Y5F0 798 aa9.81□□□□□ -0.84
ZNF404-201ENST00000324394 DNAJC5Q9H3Z4 198 aa9.79□□□□□ -0.84
ZNF404-201ENST00000324394 TAOK2Q9UL54 1235 aa9.79□□□□□ -0.84
ZNF404-201ENST00000324394 STK25O00506 426 aa9.79□□□□□ -0.84
ZNF404-201ENST00000324394 VGFO15240 615 aaPredicted RBP9.79□□□□□ -0.84
ZNF404-201ENST00000324394 NKX1-1Q15270 411 aaPredicted RBP9.79□□□□□ -0.84
ZNF404-201ENST00000324394 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.75□□□□□ -0.85
ZNF404-201ENST00000324394 IRX5P78411 483 aaPredicted RBP9.75□□□□□ -0.85
ZNF404-201ENST00000324394 ZFP91Q96JP5 570 aaPredicted RBP9.75□□□□□ -0.85
ZNF404-201ENST00000324394 TMEM106CQ9BVX2 250 aa9.75□□□□□ -0.85
ZNF404-201ENST00000324394 MARVELD3Q96A59 401 aa9.73□□□□□ -0.85
ZNF404-201ENST00000324394 BCL11BQ9C0K0 894 aaPredicted RBP9.73□□□□□ -0.85
ZNF404-201ENST00000324394 BCANQ96GW7 911 aa9.72□□□□□ -0.85
ZNF404-201ENST00000324394 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.72□□□□□ -0.85
ZNF404-201ENST00000324394 GTPBP6O43824 516 aaPredicted RBP9.72□□□□□ -0.85
ZNF404-201ENST00000324394 IFNL1Q8IU54 200 aa9.72□□□□□ -0.85
ZNF404-201ENST00000324394 STK24Q9Y6E0 443 aa9.72□□□□□ -0.85
ZNF404-201ENST00000324394 OCEL1Q9H607 264 aa9.7□□□□□ -0.86
ZNF404-201ENST00000324394 EMP3P54852 163 aa9.66□□□□□ -0.86
ZNF404-201ENST00000324394 ZNF467Q7Z7K2 595 aaPredicted RBP9.65□□□□□ -0.86
ZNF404-201ENST00000324394 PCDHB8Q9UN66 801 aa9.65□□□□□ -0.86
ZNF404-201ENST00000324394 KRTAP3-3Q9BYR6 98 aa9.63□□□□□ -0.87
ZNF404-201ENST00000324394 KRTAP3-2Q9BYR7 98 aa9.63□□□□□ -0.87
ZNF404-201ENST00000324394 PDAP1Q13442 181 aaKnown RBP9.6□□□□□ -0.87
ZNF404-201ENST00000324394 HS3ST6Q96QI5 342 aa9.6□□□□□ -0.87
ZNF404-201ENST00000324394 RYDENQ9NUL5 291 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms